CU117974 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU117974
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr4 : 18515681 .. 18515951 (-)
Sequence length271
The following sequences are available for this feature:

transcribed_cluster sequence

AGTAATTCTACTGAATCAACTTCTGGTATTGAATCAGATGATGTCTCCCAAAATGAAATTTCTATAGAATTGAAGGATCATAAAAACGTAGAAGAAGTATGTATGTGAGGTAAAACAGTTTTCTGCAAATTCAGCCATAGACACGACATTGACATCTAGTGGGACCAGTAACCAAGTAGGGACTAGCTCATTAAATTCTGATAACTGCTCATCGTGCCTGAGTGAAGGAGACAGTAATACTATTGGCTCGAACCATGGAAATTTAGAATCC
BLAST of CU117974 vs. TrEMBL
Match: A0A0A0KZE9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G563700 PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 3.6e-14
Identity = 44/57 (77.19%), Postives = 44/57 (77.19%), Query Frame = 2

Query: 101 VCEVKQFSANSAIDTTLTSSGTSNQVGTXXXXXXXXXXXXXEGDSNTIGSNHGNLES 160
           VCEVKQFSANSAIDTTLTSSGTSNQVGT             EGDSNTIGSNHGNLES
Sbjct: 903 VCEVKQFSANSAIDTTLTSSGTSNQVGTSSLNSDNCSSCLSEGDSNTIGSNHGNLES 959

Query: 161 220
           
Sbjct: 963 959

Query: 221 272
           
Sbjct: 1023 959

BLAST of CU117974 vs. TrEMBL
Match: A0A0A0KZE9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G563700 PE=4 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 3.9e-08
Identity = 34/35 (97.14%), Postives = 34/35 (97.14%), Query Frame = 1

Query: 1   SNSTESTSGIESDDVSQNEISIELKDHKNVEE-VC 60
           SNSTESTSGIESDDVSQNEISIELKDHKNVEE VC
Sbjct: 870 SNSTESTSGIESDDVSQNEISIELKDHKNVEEDVC 904

Query: 61  103
           
Sbjct: 930 904

BLAST of CU117974 vs. NCBI nr
Match: gi|778695132|ref|XP_011653932.1| (PREDICTED: uncharacterized protein LOC101210448 [Cucumis sativus])

HSP 1 Score: 83.2 bits (204), Expect = 2.6e-13
Identity = 44/57 (77.19%), Postives = 44/57 (77.19%), Query Frame = 2

Query: 101 VCEVKQFSANSAIDTTLTSSGTSNQVGTXXXXXXXXXXXXXEGDSNTIGSNHGNLES 160
           VCEVKQFSANSAIDTTLTSSGTSNQVGT             EGDSNTIGSNHGNLES
Sbjct: 903 VCEVKQFSANSAIDTTLTSSGTSNQVGTSSLNSDNCSSCLSEGDSNTIGSNHGNLES 959

Query: 161 220
           
Sbjct: 963 959

Query: 221 272
           
Sbjct: 1023 959

BLAST of CU117974 vs. NCBI nr
Match: gi|659083255|ref|XP_008442254.1| (PREDICTED: uncharacterized protein LOC103486163 [Cucumis melo])

HSP 1 Score: 80.1 bits (196), Expect = 2.2e-12
Identity = 43/57 (75.44%), Postives = 43/57 (75.44%), Query Frame = 2

Query: 101 VCEVKQFSANSAIDTTLTSSGTSNQVGTXXXXXXXXXXXXXEGDSNTIGSNHGNLES 160
           VCEVKQ SANSAIDTTLTSSGTSNQVGT             EGDSNTIGSNHGNLES
Sbjct: 912 VCEVKQCSANSAIDTTLTSSGTSNQVGTSSLNSDNCSSCLSEGDSNTIGSNHGNLES 968

Query: 161 220
           
Sbjct: 972 968

Query: 221 272
           
Sbjct: 1032 968

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0KZE9_CUCSA3.6e-1477.19Uncharacterized protein OS=Cucumis sativus GN=Csa_4G563700 PE=4 SV=1[more]
A0A0A0KZE9_CUCSA3.9e-0897.14Uncharacterized protein OS=Cucumis sativus GN=Csa_4G563700 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|778695132|ref|XP_011653932.1|2.6e-1377.19PREDICTED: uncharacterized protein LOC101210448 [Cucumis sativus][more]
gi|659083255|ref|XP_008442254.1|2.2e-1275.44PREDICTED: uncharacterized protein LOC103486163 [Cucumis melo][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa4G563700Csa4G563700gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
H0071898H0071898EST
H0153979H0153979EST