CU117837 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU117837
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr2 : 16996614 .. 16997573 (+)
Sequence length187
The following sequences are available for this feature:

transcribed_cluster sequence

TGTAGCCACATCCACGGAAGATAAGTCGCCGCTCAACGTATCATCCTGAATGCGAAGGTAGTTGTCTTCACAATGAAGGGCTTGAAAAAATGACAGAAAGATGAAAATCCACCATATCAGAACTTGCTTGTGAAAAGACGTCGATTATTGGGGTGGAACCGCCGTTGGTTAACCAGTCCAACATCCC
Library categoryESTs
gynoecious flower library2
BLAST of CU117837 vs. Swiss-Prot
Match: PLP2_ARATH (Patatin-like protein 2 OS=Arabidopsis thaliana GN=PLP2 PE=1 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 1.7e-08
Identity = 26/34 (76.47%), Postives = 28/34 (82.35%), Query Frame = -1

Query: 86  GMLDWLTNGGSTPIIDVFSQASSDMVDFHLSVIF 145
           G+L+WLT+  STPIID FSQASSDMVDFHLS +F
Sbjct: 278 GLLNWLTHDNSTPIIDAFSQASSDMVDFHLSAVF 311

Query: 146 188
           
Sbjct: 338 311


HSP 2 Score: 44.3 bits (103), Expect = 5.7e-04
Identity = 19/27 (70.37%), Postives = 22/27 (81.48%), Query Frame = -2

Query: 4   QALHCEDNYLRIQDDTLSGDLSSVDVA 63
           +ALH E NY+RIQDDTL+GD +SVD+A
Sbjct: 312 RALHSEANYIRIQDDTLTGDAASVDIA 338

Query: 64  85
           
Sbjct: 372 338

BLAST of CU117837 vs. Swiss-Prot
Match: PLP2_ORYSI (Patatin-like protein 2 OS=Oryza sativa subsp. indica GN=PLP2 PE=3 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 6.1e-06
Identity = 21/36 (58.33%), Postives = 26/36 (72.22%), Query Frame = -1

Query: 80  GMLDWLTNGGSTPIIDVFSQASSDMVDFHLSVIFSS 139
           G+ +WL  G S PIID+F+ AS+DMVD HL V+FS+
Sbjct: 282 GIFNWLIKGSSAPIIDMFTSASADMVDIHLGVLFSA 317

Query: 140 188
           
Sbjct: 342 317


HSP 2 Score: 34.3 bits (77), Expect = 5.9e-01
Identity = 15/24 (62.50%), Postives = 15/24 (62.50%), Query Frame = -2

Query: 10  ALHCEDNYLRIQDDTLSGDLSSVD 69
           AL CE NYLRIQ D L+G   S+D
Sbjct: 317 ALQCEKNYLRIQYDQLTGSAGSID 340

Query: 70  82
           
Sbjct: 377 340

BLAST of CU117837 vs. Swiss-Prot
Match: PLP2_ORYSJ (Patatin-like protein 2 OS=Oryza sativa subsp. japonica GN=PLP2 PE=3 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 6.1e-06
Identity = 21/36 (58.33%), Postives = 26/36 (72.22%), Query Frame = -1

Query: 80  GMLDWLTNGGSTPIIDVFSQASSDMVDFHLSVIFSS 139
           G+ +WL  G S PIID+F+ AS+DMVD HL V+FS+
Sbjct: 282 GIFNWLIKGSSAPIIDMFTSASADMVDIHLGVLFSA 317

Query: 140 188
           
Sbjct: 342 317


HSP 2 Score: 34.3 bits (77), Expect = 5.9e-01
Identity = 15/24 (62.50%), Postives = 15/24 (62.50%), Query Frame = -2

Query: 10  ALHCEDNYLRIQDDTLSGDLSSVD 69
           AL CE NYLRIQ D L+G   S+D
Sbjct: 317 ALQCEKNYLRIQYDQLTGSAGSID 340

Query: 70  82
           
Sbjct: 377 340

BLAST of CU117837 vs. TrEMBL
Match: A0A0A0LKY1_CUCSA (Patatin OS=Cucumis sativus GN=Csa_2G360570 PE=3 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 1.3e-10
Identity = 34/36 (94.44%), Postives = 35/36 (97.22%), Query Frame = -1

Query: 80  GMLDWLTNGGSTPIIDVFSQASSDMVDFHLSVIFSS 139
           GMLDWLTNGGSTPIIDVFSQASSDMVDFHLSVIF +
Sbjct: 180 GMLDWLTNGGSTPIIDVFSQASSDMVDFHLSVIFQA 215

Query: 140 188
           
Sbjct: 240 215

BLAST of CU117837 vs. TrEMBL
Match: A0A0A0LKY1_CUCSA (Patatin OS=Cucumis sativus GN=Csa_2G360570 PE=3 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 4.3e-06
Identity = 27/27 (100.00%), Postives = 27/27 (100.00%), Query Frame = -2

Query: 4   QALHCEDNYLRIQDDTLSGDLSSVDVA 63
           QALHCEDNYLRIQDDTLSGDLSSVDVA
Sbjct: 214 QALHCEDNYLRIQDDTLSGDLSSVDVA 240

Query: 64  85
           
Sbjct: 274 240


HSP 2 Score: 64.7 bits (156), Expect = 4.5e-08
Identity = 27/36 (75.00%), Postives = 34/36 (94.44%), Query Frame = -1

Query: 80  GMLDWLTNGGSTPIIDVFSQASSDMVDFHLSVIFSS 139
           G+LDWLT+GG TPIIDVFSQ+S+DMVD+HLSV+F +
Sbjct: 278 GLLDWLTSGGGTPIIDVFSQSSADMVDYHLSVVFQA 313

Query: 140 188
           
Sbjct: 338 313

BLAST of CU117837 vs. TrEMBL
Match: M5XD94_PRUPE (Patatin OS=Prunus persica GN=PRUPE_ppa006466mg PE=3 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 9.8e-03
Identity = 21/27 (77.78%), Postives = 25/27 (92.59%), Query Frame = -2

Query: 4   QALHCEDNYLRIQDDTLSGDLSSVDVA 63
           QALH E+NYLRIQDDTL+G +SSVD+A
Sbjct: 312 QALHSENNYLRIQDDTLTGHVSSVDIA 338

Query: 64  85
           
Sbjct: 372 338


HSP 2 Score: 64.3 bits (155), Expect = 5.9e-08
Identity = 28/36 (77.78%), Postives = 33/36 (91.67%), Query Frame = -1

Query: 80  GMLDWLTNGGSTPIIDVFSQASSDMVDFHLSVIFSS 139
           G+L WLT+GGSTP++DVFSQASSDMVDFHLS IF +
Sbjct: 264 GILGWLTSGGSTPLVDVFSQASSDMVDFHLSTIFQT 299

Query: 140 188
           
Sbjct: 324 299

BLAST of CU117837 vs. TrEMBL
Match: A0A068URZ4_COFCA (Patatin OS=Coffea canephora GN=GSCOC_T00033092001 PE=3 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 2.2e-02
Identity = 21/27 (77.78%), Postives = 24/27 (88.89%), Query Frame = -2

Query: 4   QALHCEDNYLRIQDDTLSGDLSSVDVA 63
           Q L  E+NYLRIQDDTL+GDL+SVDVA
Sbjct: 298 QTLQSEENYLRIQDDTLTGDLASVDVA 324

Query: 64  85
           
Sbjct: 358 324


HSP 2 Score: 64.3 bits (155), Expect = 5.9e-08
Identity = 28/36 (77.78%), Postives = 33/36 (91.67%), Query Frame = -1

Query: 80  GMLDWLTNGGSTPIIDVFSQASSDMVDFHLSVIFSS 139
           G+L WLT+GGSTP++DVFSQASSDMVDFHLS IF +
Sbjct: 264 GILGWLTSGGSTPLVDVFSQASSDMVDFHLSTIFQT 299

Query: 140 188
           
Sbjct: 324 299

BLAST of CU117837 vs. TrEMBL
Match: A0A068URB8_COFCA (Patatin OS=Coffea canephora GN=GSCOC_T00033097001 PE=3 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 2.2e-02
Identity = 21/27 (77.78%), Postives = 24/27 (88.89%), Query Frame = -2

Query: 4   QALHCEDNYLRIQDDTLSGDLSSVDVA 63
           Q L  E+NYLRIQDDTL+GDL+SVDVA
Sbjct: 298 QTLQSEENYLRIQDDTLTGDLASVDVA 324

Query: 64  85
           
Sbjct: 358 324


HSP 2 Score: 63.9 bits (154), Expect = 7.7e-08
Identity = 27/36 (75.00%), Postives = 33/36 (91.67%), Query Frame = -1

Query: 80  GMLDWLTNGGSTPIIDVFSQASSDMVDFHLSVIFSS 139
           G+L WLT+GGSTP++DVFSQASSDMVDFHLS +F +
Sbjct: 277 GILGWLTSGGSTPLVDVFSQASSDMVDFHLSTVFQT 312

Query: 140 188
           
Sbjct: 337 312

BLAST of CU117837 vs. NCBI nr
Match: gi|449470176|ref|XP_004152794.1| (PREDICTED: patatin-like protein 2 [Cucumis sativus])

HSP 1 Score: 73.6 bits (179), Expect = 1.4e-10
Identity = 34/36 (94.44%), Postives = 35/36 (97.22%), Query Frame = -1

Query: 80  GMLDWLTNGGSTPIIDVFSQASSDMVDFHLSVIFSS 139
           GMLDWLTNGGSTPIIDVFSQASSDMVDFHLSVIF +
Sbjct: 275 GMLDWLTNGGSTPIIDVFSQASSDMVDFHLSVIFQA 310

Query: 140 188
           
Sbjct: 335 310

BLAST of CU117837 vs. NCBI nr
Match: gi|700207421|gb|KGN62540.1| (hypothetical protein Csa_2G360570 [Cucumis sativus])

HSP 1 Score: 73.6 bits (179), Expect = 1.4e-10
Identity = 34/36 (94.44%), Postives = 35/36 (97.22%), Query Frame = -1

Query: 80  GMLDWLTNGGSTPIIDVFSQASSDMVDFHLSVIFSS 139
           GMLDWLTNGGSTPIIDVFSQASSDMVDFHLSVIF +
Sbjct: 180 GMLDWLTNGGSTPIIDVFSQASSDMVDFHLSVIFQA 215

Query: 140 188
           
Sbjct: 240 215

BLAST of CU117837 vs. NCBI nr
Match: gi|659087800|ref|XP_008444643.1| (PREDICTED: patatin-like protein 2 [Cucumis melo])

HSP 1 Score: 71.2 bits (173), Expect = 7.0e-10
Identity = 33/36 (91.67%), Postives = 34/36 (94.44%), Query Frame = -1

Query: 80  GMLDWLTNGGSTPIIDVFSQASSDMVDFHLSVIFSS 139
           GMLDWLTNGGSTPIIDVFSQASSDMVD HLSVIF +
Sbjct: 275 GMLDWLTNGGSTPIIDVFSQASSDMVDLHLSVIFQA 310

Query: 140 188
           
Sbjct: 335 310

BLAST of CU117837 vs. NCBI nr
Match: gi|694382777|ref|XP_009367378.1| (PREDICTED: patatin-like protein 2 [Pyrus x bretschneideri])

HSP 1 Score: 66.2 bits (160), Expect = 2.2e-08
Identity = 28/36 (77.78%), Postives = 34/36 (94.44%), Query Frame = -1

Query: 80  GMLDWLTNGGSTPIIDVFSQASSDMVDFHLSVIFSS 139
           G+LDWLT+GG TPIIDVFSQ+SSDMVD+HLSV+F +
Sbjct: 278 GLLDWLTSGGGTPIIDVFSQSSSDMVDYHLSVVFQA 313

Query: 140 188
           
Sbjct: 338 313

BLAST of CU117837 vs. NCBI nr
Match: gi|658002656|ref|XP_008393827.1| (PREDICTED: patatin-like protein 2 isoform X1 [Malus domestica])

HSP 1 Score: 66.2 bits (160), Expect = 2.2e-08
Identity = 28/36 (77.78%), Postives = 34/36 (94.44%), Query Frame = -1

Query: 80  GMLDWLTNGGSTPIIDVFSQASSDMVDFHLSVIFSS 139
           G+LDWLT+GG TPIIDVFSQ+SSDMVD+HLSV+F +
Sbjct: 278 GLLDWLTSGGGTPIIDVFSQSSSDMVDYHLSVVFQA 313

Query: 140 188
           
Sbjct: 338 313

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PLP2_ARATH1.7e-0876.47Patatin-like protein 2 OS=Arabidopsis thaliana GN=PLP2 PE=1 SV=1[more]
PLP2_ORYSI6.1e-0658.33Patatin-like protein 2 OS=Oryza sativa subsp. indica GN=PLP2 PE=3 SV=1[more]
PLP2_ORYSJ6.1e-0658.33Patatin-like protein 2 OS=Oryza sativa subsp. japonica GN=PLP2 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0LKY1_CUCSA1.3e-1094.44Patatin OS=Cucumis sativus GN=Csa_2G360570 PE=3 SV=1[more]
A0A0A0LKY1_CUCSA4.3e-06100.00Patatin OS=Cucumis sativus GN=Csa_2G360570 PE=3 SV=1[more]
M5XD94_PRUPE9.8e-0377.78Patatin OS=Prunus persica GN=PRUPE_ppa006466mg PE=3 SV=1[more]
A0A068URZ4_COFCA2.2e-0277.78Patatin OS=Coffea canephora GN=GSCOC_T00033092001 PE=3 SV=1[more]
A0A068URB8_COFCA2.2e-0277.78Patatin OS=Coffea canephora GN=GSCOC_T00033097001 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
gi|449470176|ref|XP_004152794.1|1.4e-1094.44PREDICTED: patatin-like protein 2 [Cucumis sativus][more]
gi|700207421|gb|KGN62540.1|1.4e-1094.44hypothetical protein Csa_2G360570 [Cucumis sativus][more]
gi|659087800|ref|XP_008444643.1|7.0e-1091.67PREDICTED: patatin-like protein 2 [Cucumis melo][more]
gi|694382777|ref|XP_009367378.1|2.2e-0877.78PREDICTED: patatin-like protein 2 [Pyrus x bretschneideri][more]
gi|658002656|ref|XP_008393827.1|2.2e-0877.78PREDICTED: patatin-like protein 2 isoform X1 [Malus domestica][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa2G360570Csa2G360570gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
G0079050G0079050EST
G0165990G0165990EST