CU117688 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU117688
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr3 : 13483779 .. 13484054 (+)
Sequence length278
The following sequences are available for this feature:

transcribed_cluster sequence

ACTAAACAAGTACTTAAGATGGGGAAAGTTTAACTTTTGTTTGATTGGAACTTACAACACTAAACCACCATTTCTCACTCACTGTACAGATAAAGACAGCAGAAATAGTGATGATTTGACCCGTTAGATTAGAGTTTGAGAGTAAGATCAAGGGTCGAGTTTTCGACATCCTCCCACGTCTTATCTGCTGAGCTTATGCTTGAAATACCAGTCAATATGAAACTTGGTCGAGTTAGTTCATCAGTGTTTCTAGTTTCTACCATTGGACGAAAACTACC
BLAST of CU117688 vs. TrEMBL
Match: A0A0A0LBR9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G196420 PE=4 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 2.5e-18
Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = -1

Query: 132 GSFRPMVETRNTDELTRPSFILTGISSISSADKTWEDVENSTLDLTLKL 191
           GSFRPMVETRNTDELTRPSFILTGISSISSADKTWEDVENSTLDLTLKL
Sbjct: 221 GSFRPMVETRNTDELTRPSFILTGISSISSADKTWEDVENSTLDLTLKL 269

Query: 192 251
           
Sbjct: 281 269

Query: 252 279
           
Sbjct: 341 269

BLAST of CU117688 vs. NCBI nr
Match: gi|449446113|ref|XP_004140816.1| (PREDICTED: zinc finger protein 4-like [Cucumis sativus])

HSP 1 Score: 100.1 bits (248), Expect = 2.1e-18
Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = -1

Query: 132 GSFRPMVETRNTDELTRPSFILTGISSISSADKTWEDVENSTLDLTLKL 191
           GSFRPMVETRNTDELTRPSFILTGISSISSADKTWEDVENSTLDLTLKL
Sbjct: 221 GSFRPMVETRNTDELTRPSFILTGISSISSADKTWEDVENSTLDLTLKL 269

Query: 192 251
           
Sbjct: 281 269

Query: 252 279
           
Sbjct: 341 269

BLAST of CU117688 vs. NCBI nr
Match: gi|659112391|ref|XP_008456195.1| (PREDICTED: zinc finger protein 4-like [Cucumis melo])

HSP 1 Score: 90.1 bits (222), Expect = 2.1e-15
Identity = 46/49 (93.88%), Postives = 47/49 (95.92%), Query Frame = -1

Query: 132 GSFRPMVETRNTDELTRPSFILTGISSISSADKTWEDVENSTLDLTLKL 191
           GSFRPMVETR+T ELTRPSFILTGISSISSADKT EDVENSTLDLTLKL
Sbjct: 221 GSFRPMVETRSTHELTRPSFILTGISSISSADKTSEDVENSTLDLTLKL 269

Query: 192 251
           
Sbjct: 281 269

Query: 252 279
           
Sbjct: 341 269

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LBR9_CUCSA2.5e-18100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G196420 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|449446113|ref|XP_004140816.1|2.1e-18100.00PREDICTED: zinc finger protein 4-like [Cucumis sativus][more]
gi|659112391|ref|XP_008456195.1|2.1e-1593.88PREDICTED: zinc finger protein 4-like [Cucumis melo][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa3G196420Csa3G196420gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
FKNP3UI02LVCA2FKNP3UI02LVCA2EST
G0120337G0120337EST