CU116270 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU116270
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr2 : 6292211 .. 6292479 (+)
Sequence length270
The following sequences are available for this feature:

transcribed_cluster sequence

GTGAAAGTTGGTGTGACGTTGTTGGATAGTCGTCAAAGCGAAGTATGCCGTTGGAGAGCGATCTTGGTTCATCAGCTGTCGATTACGACTGGGACTTAAGCGAGATTAAAGCACAAAAACAAAATTTCCAAAAGAACGGATACAGGATTGTTATGAAGCGATCGCACAGTGAGCGTTACGATCCTGACGCTTTCAATGGAAAACCTAGTGGATCGGTTTGTAATACGAACTCGGTAATTGGTGGACGTGAGTCCGTGCGGAGCAAATCGG
Library categoryESTs
gynoecious flower library2
BLAST of CU116270 vs. TrEMBL
Match: A0A0A0LKL3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G076000 PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 1.3e-37
Identity = 79/80 (98.75%), Postives = 80/80 (100.00%), Query Frame = 3

Query: 30  SSKRSMPLESDLGSSAVDYDWDLSEIKAQKQNFQKNGYRIVMKRSHSERYDPDAFNGKPS 89
           S+KRSMPLESDLGSSAVDYDWDLSEIKAQKQNFQKNGYRIVMKRSHSERYDPDAFNGKPS
Sbjct: 136 SAKRSMPLESDLGSSAVDYDWDLSEIKAQKQNFQKNGYRIVMKRSHSERYDPDAFNGKPS 195

Query: 90  GSVCNTNSVIGGRESVRSKS 149
           GSVCNTNSVIGGRESVRSKS
Sbjct: 196 GSVCNTNSVIGGRESVRSKS 215

Query: 150 209
           
Sbjct: 256 215

Query: 210 269
           
Sbjct: 316 215

BLAST of CU116270 vs. NCBI nr
Match: gi|449470322|ref|XP_004152866.1| (PREDICTED: uncharacterized protein LOC101218582 [Cucumis sativus])

HSP 1 Score: 161.8 bits (408), Expect = 5.6e-37
Identity = 79/80 (98.75%), Postives = 80/80 (100.00%), Query Frame = 3

Query: 30  SSKRSMPLESDLGSSAVDYDWDLSEIKAQKQNFQKNGYRIVMKRSHSERYDPDAFNGKPS 89
           S+KRSMPLESDLGSSAVDYDWDLSEIKAQKQNFQKNGYRIVMKRSHSERYDPDAFNGKPS
Sbjct: 136 SAKRSMPLESDLGSSAVDYDWDLSEIKAQKQNFQKNGYRIVMKRSHSERYDPDAFNGKPS 195

Query: 90  GSVCNTNSVIGGRESVRSKS 149
           GSVCNTNSVIGGRESVRSKS
Sbjct: 196 GSVCNTNSVIGGRESVRSKS 215

Query: 150 209
           
Sbjct: 256 215

Query: 210 269
           
Sbjct: 316 215

BLAST of CU116270 vs. NCBI nr
Match: gi|659082343|ref|XP_008441789.1| (PREDICTED: uncharacterized protein LOC103485843 [Cucumis melo])

HSP 1 Score: 144.1 bits (362), Expect = 1.2e-31
Identity = 69/80 (86.25%), Postives = 74/80 (92.50%), Query Frame = 3

Query: 30  SSKRSMPLESDLGSSAVDYDWDLSEIKAQKQNFQKNGYRIVMKRSHSERYDPDAFNGKPS 89
           S+KRSMPLESDLGSSAVDYDWDL EIKAQKQNFQKNGY IVMKRSHS RYDPDA NGKP 
Sbjct: 136 SAKRSMPLESDLGSSAVDYDWDLREIKAQKQNFQKNGYTIVMKRSHSARYDPDALNGKPG 195

Query: 90  GSVCNTNSVIGGRESVRSKS 149
           GSVCN +SV+GGR+SVRS+S
Sbjct: 196 GSVCNASSVMGGRDSVRSRS 215

Query: 150 209
           
Sbjct: 256 215

Query: 210 269
           
Sbjct: 316 215

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LKL3_CUCSA1.3e-3798.75Uncharacterized protein OS=Cucumis sativus GN=Csa_2G076000 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|449470322|ref|XP_004152866.1|5.6e-3798.75PREDICTED: uncharacterized protein LOC101218582 [Cucumis sativus][more]
gi|659082343|ref|XP_008441789.1|1.2e-3186.25PREDICTED: uncharacterized protein LOC103485843 [Cucumis melo][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa2G076000Csa2G076000gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
G0038952G0038952EST
G0041574G0041574EST