CU114916 (transcribed_cluster) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CU114916
Type	transcribed_cluster
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Unknown protein
Location	Chr7 : 12589782 .. 12590226 (-)
Sequence length	452

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

CAAGAAACGCTTTAACTTCTCTGGCTCCGTCTCCTGGCTGCTGCTCAACACTTGGTTGTGAGGCACTGATAGCATGTTACTAAGGCGACCGGAGAGAAGATTTCTAAATCCATAAAGACACATCTCAGGGAACTGGAGGAAAGTTTTCGGATGACCACCATTACGGTGTGTGTTAGGTATGGCTAGTTTTTGCTCCAAGTGATGCCTCAATATAGCAGACTTCAAGAAGTAGCCATATAAGATGGAGGCCACGTAAACACGGCCCAGATGTGCTTGTCTAATGTTAGTCATAGCCCAGTTGTCCGTGACACTCGAATCTGCTCTCAAACCAATCACTGTGGTTATGTGTTCTTTAATCATCCCAAGAACCTCTAACTCGTAAATGGACTCCAGTTCCCAGTCTTTGCATGGCAAAATTTCTAGTCTTCCATTATATACACATCTCCCGGCCG

Library


Library category	ESTs
fruit (8DPP) library	5

Homology

[Close]

BLAST of CU114916 vs. Swiss-Prot
Match: UVB31_ARATH (UV-B-induced protein At3g17800, chloroplastic OS=Arabidopsis thaliana GN=At3g17800 PE=2 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 1.7e-06
Identity = 29/85 (34.12%), Postives = 47/85 (55.29%), Query Frame = -3


Query: 178 NGRLEILPCKDWELESIYELEVLGMIKEHITTVIGLRADSSVTDNWAMTNIRQAHLGRVY 237
           +GR++  P K  +LE ++  E+  MI  H+  ++G R    + D  ++  I +  +G+VY
Sbjct: 196 SGRVDTWPTKVEKLERLHSPEMYEMIHNHLALILGSR----MGDLNSVAQISKLRVGQVY 255

Query: 238 VASILYGYFLKSAILRHHLEQKLAI 297
            AS++YGYFLK    R  LE+ + I
Sbjct: 256 AASVMYGYFLKRVDQRFQLEKTMKI 276

Query: 298  357
           
Sbjct: 316  276

Query: 358  417
           
Sbjct: 376  276

Query: 418  433
           
Sbjct: 436  276

[Close]

BLAST of CU114916 vs. TrEMBL
Match: A0A0A0K582_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G352410 PE=4 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 6.3e-80
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = -3


Query: 1   RCVYNGRLEILPCKDWELESIYELEVLGMIKEHITTVIGLRADSSVTDNWAMTNIRQAHL 60
           RCVYNGRLEILPCKDWELESIYELEVLGMIKEHITTVIGLRADSSVTDNWAMTNIRQAHL
Sbjct: 159 RCVYNGRLEILPCKDWELESIYELEVLGMIKEHITTVIGLRADSSVTDNWAMTNIRQAHL 218

Query: 61  GRVYVASILYGYFLKSAILRHHLEQKLAIPNTHRNGGHPKTFLQFPEMCLYGFRNLLSGR 120
           GRVYVASILYGYFLKSAILRHHLEQKLAIPNTHRNGGHPKTFLQFPEMCLYGFRNLLSGR
Sbjct: 219 GRVYVASILYGYFLKSAILRHHLEQKLAIPNTHRNGGHPKTFLQFPEMCLYGFRNLLSGR 278

Query: 121 LSNMLSVPHNQVLSSSQETEPEKLKRFL 180
           LSNMLSVPHNQVLSSSQETEPEKLKRFL
Sbjct: 279 LSNMLSVPHNQVLSSSQETEPEKLKRFL 306

Query: 181  240
           
Sbjct: 339  306

Query: 241  300
           
Sbjct: 399  306

Query: 301  360
           
Sbjct: 459  306

Query: 361  420
           
Sbjct: 519  306

Query: 421  445
           
Sbjct: 579  306

[Close]

BLAST of CU114916 vs. TrEMBL
Match: G7LF69_MEDTR (DUF760 family protein OS=Medicago truncatula GN=MTR_8g012420 PE=4 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 3.0e-37
Identity = 85/148 (57.43%), Postives = 106/148 (71.62%), Query Frame = -3


Query: 1   RCVYNGRLEILPCKDWELESIYELEVLGMIKEHITTVIGLRADSSVTDNWAMTNIRQAHL 60
           RC+YNGRLEILP KDWELESI+ LEVL MI+EH+TTV GL+A  SVT++WA T +RQ  L
Sbjct: 147 RCLYNGRLEILPSKDWELESIHTLEVLDMIREHVTTVTGLKAKPSVTESWATTKVRQFLL 206

Query: 61  GRVYVASILYGYFLKSAILRHHLEQKLAIPNTHRNGGHPKTFLQFPEMCLYGFRNLLSGR 120
           GR+YVASILYGYFLKS  LR+HLE+ L + N   + GH +T L F +MC YGF + + G 
Sbjct: 207 GRIYVASILYGYFLKSVSLRYHLERNLNLANHDVHPGH-RTNLSFKDMCPYGFEDDIFGH 266

Query: 121 LSNMLSVPHNQVLSSSQETEPEKLKRFL 180
           LSNM  +    +    QE E E LK ++
Sbjct: 267 LSNMKPIGQGLI---RQEEEIEDLKCYV 290

Query: 181  240
           
Sbjct: 327  290

Query: 241  300
           
Sbjct: 387  290

Query: 301  360
           
Sbjct: 447  290

Query: 361  420
           
Sbjct: 507  290

Query: 421  445
           
Sbjct: 567  290

[Close]

BLAST of CU114916 vs. TrEMBL
Match: B9GQN1_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s24910g PE=4 SV=2)

HSP 1 Score: 159.5 bits (402), Expect = 3.3e-36
Identity = 84/149 (56.38%), Postives = 107/149 (71.81%), Query Frame = -3


Query: 1   RCVYNGRLEILPCKDWELESIYELEVLGMIKEHITTVIGLRADSSVTDNWAMTNIRQAHL 60
           RC+YNGRLEI P KDWELESI+  EVL M++EH++TVIGL+A+SSV D+WA T +++  L
Sbjct: 179 RCIYNGRLEIRPSKDWELESIHSFEVLEMVREHVSTVIGLKANSSVADSWATTEVQRCRL 238

Query: 61  GRVYVASILYGYFLKSAILRHHLEQKLAIPNTHRNGGHPKTFLQFPE-MCLYGFRNLLSG 120
           GRVY ASILYGYFLKSA LRHHLE  L +P+   + GH  T LQFPE +  YG  NL+ G
Sbjct: 239 GRVYAASILYGYFLKSASLRHHLEWCLVLPHQDIHLGHRST-LQFPESLPSYGLTNLVFG 298

Query: 121 RLSNMLSVPHNQVLSSSQETEPEKLKRFL 180
            +SN  S      L +  ++E EKLK ++
Sbjct: 299 HISNKQSTSQGTRL-NRPKSEHEKLKCYM 325

Query: 181  240
           
Sbjct: 359  325

Query: 241  300
           
Sbjct: 419  325

Query: 301  360
           
Sbjct: 479  325

Query: 361  420
           
Sbjct: 539  325

Query: 421  445
           
Sbjct: 599  325

[Close]

BLAST of CU114916 vs. TrEMBL
Match: M5VPX9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007244mg PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 4.3e-36
Identity = 78/124 (62.90%), Postives = 96/124 (77.42%), Query Frame = -3


Query: 73  RCVYNGRLEILPCKDWELESIYELEVLGMIKEHITTVIGLRADSSVTDNWAMTNIRQAHL 132
           RC+YNGRLEI P KDWELES+Y  E+L MI+EH++TVIGLR +SSVTDNWAMT I +  L
Sbjct: 150 RCIYNGRLEIWPSKDWELESLYSFEILEMIREHVSTVIGLRVNSSVTDNWAMTKITRQML 209

Query: 133 GRVYVASILYGYFLKSAILRHHLEQKLAIPNTHRNGGHPKTFLQFPEMCLYGFRNLLSGR 192
           GRVYVASILYGYFLKSA LRH L++ LA+ +   +  H +T L + EMC  G +NLL GR
Sbjct: 210 GRVYVASILYGYFLKSASLRHRLDRILALESQDLHLSH-RTSLHYQEMCPNGMKNLLFGR 269

Query: 193 LSNM 252
           + N+
Sbjct: 270 IGNI 272

Query: 253  312
           
Sbjct: 330  272

Query: 313  372
           
Sbjct: 390  272

Query: 373  432
           
Sbjct: 450  272

Query: 433  445
           
Sbjct: 510  272

[Close]

BLAST of CU114916 vs. TrEMBL
Match: I1JM64_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_03G085900 PE=4 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 2.1e-35
Identity = 87/147 (59.18%), Postives = 105/147 (71.43%), Query Frame = -3


Query: 1   CVYNGRLEILPCKDWELESIYELEVLGMIKEHITTVIGLRADSSVTDNWAMTNIRQAHLG 60
           C+YNGRLEILP KDWELESI+ LEVL MI+EHITTV GLRA SSVT+ WA T++RQ  L 
Sbjct: 173 CLYNGRLEILPSKDWELESIHSLEVLDMIREHITTVTGLRAKSSVTECWATTHVRQFLLA 232

Query: 61  RVYVASILYGYFLKSAILRHHLEQKLAIPNTHRNGGHPKTFLQFPEMCLYGFRNLLSGRL 120
           RVYVASILYGYFLKS  LR+HLE+ L++ N   + GH KT L    MC YGF++ + G L
Sbjct: 233 RVYVASILYGYFLKSVSLRYHLERNLSLANHDLHLGH-KTSL----MCSYGFKDAIFGHL 292

Query: 121 SNMLSVPHNQVLSSSQETEPEKLKRFL 180
           SNM S+    +     E E E LK ++
Sbjct: 293 SNMSSLGQGLI---RPEEELEDLKCYV 311

Query: 181  240
           
Sbjct: 353  311

Query: 241  300
           
Sbjct: 413  311

Query: 301  360
           
Sbjct: 473  311

Query: 361  420
           
Sbjct: 533  311

Query: 421  442
           
Sbjct: 593  311

[Close]

BLAST of CU114916 vs. NCBI nr
Match: gi|449464112|ref|XP_004149773.1| (PREDICTED: uncharacterized protein LOC101209314 [Cucumis sativus])

HSP 1 Score: 307.0 bits (785), Expect = 1.8e-80
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = -3


Query: 1   RCVYNGRLEILPCKDWELESIYELEVLGMIKEHITTVIGLRADSSVTDNWAMTNIRQAHL 60
           RCVYNGRLEILPCKDWELESIYELEVLGMIKEHITTVIGLRADSSVTDNWAMTNIRQAHL
Sbjct: 159 RCVYNGRLEILPCKDWELESIYELEVLGMIKEHITTVIGLRADSSVTDNWAMTNIRQAHL 218

Query: 61  GRVYVASILYGYFLKSAILRHHLEQKLAIPNTHRNGGHPKTFLQFPEMCLYGFRNLLSGR 120
           GRVYVASILYGYFLKSAILRHHLEQKLAIPNTHRNGGHPKTFLQFPEMCLYGFRNLLSGR
Sbjct: 219 GRVYVASILYGYFLKSAILRHHLEQKLAIPNTHRNGGHPKTFLQFPEMCLYGFRNLLSGR 278

Query: 121 LSNMLSVPHNQVLSSSQETEPEKLKRFL 180
           LSNMLSVPHNQVLSSSQETEPEKLKRFL
Sbjct: 279 LSNMLSVPHNQVLSSSQETEPEKLKRFL 306

Query: 181  240
           
Sbjct: 339  306

Query: 241  300
           
Sbjct: 399  306

Query: 301  360
           
Sbjct: 459  306

Query: 361  420
           
Sbjct: 519  306

Query: 421  445
           
Sbjct: 579  306

[Close]

BLAST of CU114916 vs. NCBI nr
Match: gi|659116391|ref|XP_008458049.1| (PREDICTED: uncharacterized protein LOC103497590 [Cucumis melo])

HSP 1 Score: 298.9 bits (764), Expect = 5.0e-78
Identity = 144/148 (97.30%), Postives = 145/148 (97.97%), Query Frame = -3


Query: 1   RCVYNGRLEILPCKDWELESIYELEVLGMIKEHITTVIGLRADSSVTDNWAMTNIRQAHL 60
           RCVYNGRLEILPCKDWELESIYELEVL MIKEHITTVIGLRADSSVTDNWAMTNIRQAHL
Sbjct: 160 RCVYNGRLEILPCKDWELESIYELEVLEMIKEHITTVIGLRADSSVTDNWAMTNIRQAHL 219

Query: 61  GRVYVASILYGYFLKSAILRHHLEQKLAIPNTHRNGGHPKTFLQFPEMCLYGFRNLLSGR 120
           GRVYVASILYGYFLKSAILRHHLEQKLAIPN HRNGGHPKTFLQFPEMCLYGFRNLLSGR
Sbjct: 220 GRVYVASILYGYFLKSAILRHHLEQKLAIPNKHRNGGHPKTFLQFPEMCLYGFRNLLSGR 279

Query: 121 LSNMLSVPHNQVLSSSQETEPEKLKRFL 180
           LSNMLSVPHNQVL+S QETEPEKLKRFL
Sbjct: 280 LSNMLSVPHNQVLNSDQETEPEKLKRFL 307

Query: 181  240
           
Sbjct: 340  307

Query: 241  300
           
Sbjct: 400  307

Query: 301  360
           
Sbjct: 460  307

Query: 361  420
           
Sbjct: 520  307

Query: 421  445
           
Sbjct: 580  307

[Close]

BLAST of CU114916 vs. NCBI nr
Match: gi|357513325|ref|XP_003626951.1| (DUF760 family protein [Medicago truncatula])

HSP 1 Score: 165.6 bits (418), Expect = 6.6e-38
Identity = 85/148 (57.43%), Postives = 106/148 (71.62%), Query Frame = -3


Query: 1   RCVYNGRLEILPCKDWELESIYELEVLGMIKEHITTVIGLRADSSVTDNWAMTNIRQAHL 60
           RC+YNGRLEILP KDWELESI+ LEVL MI+EH+TTV GL+A  SVT++WA T +RQ  L
Sbjct: 147 RCLYNGRLEILPSKDWELESIHTLEVLDMIREHVTTVTGLKAKPSVTESWATTKVRQFLL 206

Query: 61  GRVYVASILYGYFLKSAILRHHLEQKLAIPNTHRNGGHPKTFLQFPEMCLYGFRNLLSGR 120
           GR+YVASILYGYFLKS  LR+HLE+ L + N   + GH +T L F +MC YGF + + G 
Sbjct: 207 GRIYVASILYGYFLKSVSLRYHLERNLNLANHDVHPGH-RTNLSFKDMCPYGFEDDIFGH 266

Query: 121 LSNMLSVPHNQVLSSSQETEPEKLKRFL 180
           LSNM  +    +    QE E E LK ++
Sbjct: 267 LSNMKPIGQGLI---RQEEEIEDLKCYV 290

Query: 181  240
           
Sbjct: 327  290

Query: 241  300
           
Sbjct: 387  290

Query: 301  360
           
Sbjct: 447  290

Query: 361  420
           
Sbjct: 507  290

Query: 421  445
           
Sbjct: 567  290

[Close]

BLAST of CU114916 vs. NCBI nr
Match: gi|502155925|ref|XP_004510240.1| (PREDICTED: uncharacterized protein LOC101489146 [Cicer arietinum])

HSP 1 Score: 162.9 bits (411), Expect = 4.3e-37
Identity = 84/147 (57.14%), Postives = 106/147 (72.11%), Query Frame = -3


Query: 1   CVYNGRLEILPCKDWELESIYELEVLGMIKEHITTVIGLRADSSVTDNWAMTNIRQAHLG 60
           C+YNGRLEILP KDWELESI+ LEVL MI+EH+TTV GL+A  SVTD WA T +R+  L 
Sbjct: 159 CLYNGRLEILPSKDWELESIHCLEVLDMIREHVTTVTGLKAKPSVTDTWATTKVRKFLLA 218

Query: 61  RVYVASILYGYFLKSAILRHHLEQKLAIPNTHRNGGHPKTFLQFPEMCLYGFRNLLSGRL 120
           RVYVASILYGYFLKS  LR+HLE+ L++ N   + GH +T L F +MC YGF++ + G L
Sbjct: 219 RVYVASILYGYFLKSVSLRYHLERNLSLANHDVHLGH-RTSLSFKDMCPYGFKDAIFGHL 278

Query: 121 SNMLSVPHNQVLSSSQETEPEKLKRFL 180
           SN+ S+    +    QE E E LK ++
Sbjct: 279 SNIQSIGQGLI---RQEEEIEDLKCYV 301

Query: 181  240
           
Sbjct: 339  301

Query: 241  300
           
Sbjct: 399  301

Query: 301  360
           
Sbjct: 459  301

Query: 361  420
           
Sbjct: 519  301

Query: 421  442
           
Sbjct: 579  301

[Close]

BLAST of CU114916 vs. NCBI nr
Match: gi|566159845|ref|XP_002303068.2| (hypothetical protein POPTR_0002s24910g [Populus trichocarpa])

HSP 1 Score: 161.8 bits (408), Expect = 9.5e-37
Identity = 84/149 (56.38%), Postives = 107/149 (71.81%), Query Frame = -3


Query: 1   RCVYNGRLEILPCKDWELESIYELEVLGMIKEHITTVIGLRADSSVTDNWAMTNIRQAHL 60
           RC+YNGRLEI P KDWELESI+  EVL M++EH++TVIGL+A+SSV D+WA T +++  L
Sbjct: 179 RCIYNGRLEIRPSKDWELESIHSFEVLEMVREHVSTVIGLKANSSVADSWATTEVQRCRL 238

Query: 61  GRVYVASILYGYFLKSAILRHHLEQKLAIPNTHRNGGHPKTFLQFPE-MCLYGFRNLLSG 120
           GRVY ASILYGYFLKSA LRHHLE  L +P+   + GH  T LQFPE +  YG  NL+ G
Sbjct: 239 GRVYAASILYGYFLKSASLRHHLEWCLVLPHQDIHLGHRST-LQFPESLPSYGLTNLVFG 298

Query: 121 RLSNMLSVPHNQVLSSSQETEPEKLKRFL 180
            +SN  S      L +  ++E EKLK ++
Sbjct: 299 HISNKQSTSQGTRL-NRPKSEHEKLKCYM 325

Query: 181  240
           
Sbjct: 359  325

Query: 241  300
           
Sbjct: 419  325

Query: 301  360
           
Sbjct: 479  325

Query: 361  420
           
Sbjct: 539  325

Query: 421  445
           
Sbjct: 599  325

The following BLAST results are available for this feature:

BLAST of CU114916 vs. Swiss-Prot


Match Name	E-value	Identity	Description
UVB31_ARATH	1.7e-06	34.12	UV-B-induced protein At3g17800, chloroplastic OS=Arabidopsis thaliana GN=At3g178...	[more]

BLAST of CU114916 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K582_CUCSA	6.3e-80	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G352410 PE=4 SV=1	[more]
G7LF69_MEDTR	3.0e-37	57.43	DUF760 family protein OS=Medicago truncatula GN=MTR_8g012420 PE=4 SV=1	[more]
B9GQN1_POPTR	3.3e-36	56.38	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s24910g PE=4 SV=2	[more]
M5VPX9_PRUPE	4.3e-36	62.90	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007244mg PE=4 SV=1	[more]
I1JM64_SOYBN	2.1e-35	59.18	Uncharacterized protein OS=Glycine max GN=GLYMA_03G085900 PE=4 SV=1	[more]

BLAST of CU114916 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449464112\|ref\|XP_004149773.1\|	1.8e-80	100.00	PREDICTED: uncharacterized protein LOC101209314 [Cucumis sativus]	[more]
gi\|659116391\|ref\|XP_008458049.1\|	5.0e-78	97.30	PREDICTED: uncharacterized protein LOC103497590 [Cucumis melo]	[more]
gi\|357513325\|ref\|XP_003626951.1\|	6.6e-38	57.43	DUF760 family protein [Medicago truncatula]	[more]
gi\|502155925\|ref\|XP_004510240.1\|	4.3e-37	57.14	PREDICTED: uncharacterized protein LOC101489146 [Cicer arietinum]	[more]
gi\|566159845\|ref\|XP_002303068.2\|	9.5e-37	56.38	hypothetical protein POPTR_0002s24910g [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition
IPR008479	DUF760

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
Csa7G352410	Csa7G352410	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
FKNP3UI02KJSX5	FKNP3UI02KJSX5	EST
FKNP3UI02M8NNS	FKNP3UI02M8NNS	EST
FKNP3UI02N3SBN	FKNP3UI02N3SBN	EST
FKNP3UI02OD025	FKNP3UI02OD025	EST
FKNP3UI02OI2TB	FKNP3UI02OI2TB	EST

InterPro

Analysis Name: InterPro Annotations of cucumber unigene v3
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008479	Protein of unknown function DUF760	PFAM	PF05542	DUF760	coord: 20..90 score: 3.1
None	No IPR available	PANTHER	PTHR31808	FAMILY NOT NAMED	coord: 4..148 score: 1.0
None	No IPR available	PANTHER	PTHR31808:SF2	F21O3.2 PROTEIN-RELATED	coord: 4..148 score: 1.0