CU114314 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU114314
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr2 : 8992786 .. 8993007 (-)
Sequence length231
The following sequences are available for this feature:

transcribed_cluster sequence

GGGCGAGGAGGTAGGGTTCTAGCTTCGTTCAAACCCAGACTGTCGTAAAACCCATACTGCACACTCCAACAAGAAGGAAGAACCAACATGGGGCGTAGGATGCCGTTGGCCGGAATGGAAACCTCTATCATGGCTACCGACTCTGTAGAATTCATTGGCGTTTCTGTTCCTTCTTCCTCATCAAGAGAGGCTGCCATTACTTCCGTTGCTTCTCAAGCTACCACCTCATTG
Library categoryESTs
gynoecious flower library2
BLAST of CU114314 vs. TrEMBL
Match: A0A0A0LLC2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G150000 PE=4 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 7.4e-16
Identity = 48/48 (100.00%), Postives = 48/48 (100.00%), Query Frame = 1

Query: 88  MGRRMPLAGMETSIMATDSVEFIGVSVPSSSSREAAITSVASQATTSL 147
           MGRRMPLAGMETSIMATDSVEFIGVSVPSSSSREAAITSVASQATTSL
Sbjct: 1   MGRRMPLAGMETSIMATDSVEFIGVSVPSSSSREAAITSVASQATTSL 48

Query: 148 207
           
Sbjct: 61  48

Query: 208 232
           
Sbjct: 121 48

BLAST of CU114314 vs. NCBI nr
Match: gi|778668501|ref|XP_011649106.1| (PREDICTED: nuclear pore complex protein NUP160 isoform X1 [Cucumis sativus])

HSP 1 Score: 85.1 bits (209), Expect = 5.8e-14
Identity = 48/48 (100.00%), Postives = 48/48 (100.00%), Query Frame = 1

Query: 88  MGRRMPLAGMETSIMATDSVEFIGVSVPSSSSREAAITSVASQATTSL 147
           MGRRMPLAGMETSIMATDSVEFIGVSVPSSSSREAAITSVASQATTSL
Sbjct: 1   MGRRMPLAGMETSIMATDSVEFIGVSVPSSSSREAAITSVASQATTSL 48

Query: 148 207
           
Sbjct: 61  48

Query: 208 232
           
Sbjct: 121 48

BLAST of CU114314 vs. NCBI nr
Match: gi|700206388|gb|KGN61507.1| (hypothetical protein Csa_2G150000 [Cucumis sativus])

HSP 1 Score: 85.1 bits (209), Expect = 5.8e-14
Identity = 48/48 (100.00%), Postives = 48/48 (100.00%), Query Frame = 1

Query: 88  MGRRMPLAGMETSIMATDSVEFIGVSVPSSSSREAAITSVASQATTSL 147
           MGRRMPLAGMETSIMATDSVEFIGVSVPSSSSREAAITSVASQATTSL
Sbjct: 1   MGRRMPLAGMETSIMATDSVEFIGVSVPSSSSREAAITSVASQATTSL 48

Query: 148 207
           
Sbjct: 61  48

Query: 208 232
           
Sbjct: 121 48

BLAST of CU114314 vs. NCBI nr
Match: gi|778668504|ref|XP_011649107.1| (PREDICTED: nuclear pore complex protein NUP160 isoform X2 [Cucumis sativus])

HSP 1 Score: 85.1 bits (209), Expect = 5.8e-14
Identity = 48/48 (100.00%), Postives = 48/48 (100.00%), Query Frame = 1

Query: 88  MGRRMPLAGMETSIMATDSVEFIGVSVPSSSSREAAITSVASQATTSL 147
           MGRRMPLAGMETSIMATDSVEFIGVSVPSSSSREAAITSVASQATTSL
Sbjct: 1   MGRRMPLAGMETSIMATDSVEFIGVSVPSSSSREAAITSVASQATTSL 48

Query: 148 207
           
Sbjct: 61  48

Query: 208 232
           
Sbjct: 121 48

BLAST of CU114314 vs. NCBI nr
Match: gi|778668507|ref|XP_011649108.1| (PREDICTED: nuclear pore complex protein NUP160 isoform X3 [Cucumis sativus])

HSP 1 Score: 85.1 bits (209), Expect = 5.8e-14
Identity = 48/48 (100.00%), Postives = 48/48 (100.00%), Query Frame = 1

Query: 88  MGRRMPLAGMETSIMATDSVEFIGVSVPSSSSREAAITSVASQATTSL 147
           MGRRMPLAGMETSIMATDSVEFIGVSVPSSSSREAAITSVASQATTSL
Sbjct: 1   MGRRMPLAGMETSIMATDSVEFIGVSVPSSSSREAAITSVASQATTSL 48

Query: 148 207
           
Sbjct: 61  48

Query: 208 232
           
Sbjct: 121 48

BLAST of CU114314 vs. NCBI nr
Match: gi|778668511|ref|XP_011649109.1| (PREDICTED: nuclear pore complex protein NUP160 isoform X4 [Cucumis sativus])

HSP 1 Score: 85.1 bits (209), Expect = 5.8e-14
Identity = 48/48 (100.00%), Postives = 48/48 (100.00%), Query Frame = 1

Query: 88  MGRRMPLAGMETSIMATDSVEFIGVSVPSSSSREAAITSVASQATTSL 147
           MGRRMPLAGMETSIMATDSVEFIGVSVPSSSSREAAITSVASQATTSL
Sbjct: 1   MGRRMPLAGMETSIMATDSVEFIGVSVPSSSSREAAITSVASQATTSL 48

Query: 148 207
           
Sbjct: 61  48

Query: 208 232
           
Sbjct: 121 48

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LLC2_CUCSA7.4e-16100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G150000 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|778668501|ref|XP_011649106.1|5.8e-14100.00PREDICTED: nuclear pore complex protein NUP160 isoform X1 [Cucumis sativus][more]
gi|700206388|gb|KGN61507.1|5.8e-14100.00hypothetical protein Csa_2G150000 [Cucumis sativus][more]
gi|778668504|ref|XP_011649107.1|5.8e-14100.00PREDICTED: nuclear pore complex protein NUP160 isoform X2 [Cucumis sativus][more]
gi|778668507|ref|XP_011649108.1|5.8e-14100.00PREDICTED: nuclear pore complex protein NUP160 isoform X3 [Cucumis sativus][more]
gi|778668511|ref|XP_011649109.1|5.8e-14100.00PREDICTED: nuclear pore complex protein NUP160 isoform X4 [Cucumis sativus][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa2G150000Csa2G150000gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
G0006664G0006664EST
G0184915G0184915EST