CU112602 (transcribed_cluster) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CU112602
Type	transcribed_cluster
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Unknown protein
Location	Chr7 : 16759175 .. 16760561 (+)
Sequence length	343

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

CCAGTCGTCGGACTTGCCGTTCTGAACATCGTAACAACTTGGTTGCTCCGTGAAAATTCCTATGTCCTCCGGCGCCCTTAGGCTGTTTGATTCTCCTACAATCTGAATGTTACGGAAGTAGCCGGCTTTGCCGAAGCCCTCACCGGGGAAGTGGCCGCTACCCATCTGGGGTGGAAGTATGTTGGCCGTCGGATTCAGAGTTAACGACTTCGCCGCCCCATTCGATCATGGAGGCGCTGTCGGTGAGATAAGAAAATAAGAAGGCCGGCCAATACCCTAAAACGTACTTATTTCCGAATTGCATCCACCAGTTTCCTTCTTTAGGGTCCTTCCAAATGAGCAA

Library


Library category	ESTs
fruit (8DPP) library	1
gynoecious flower library	1

Homology

[Close]

BLAST of CU112602 vs. TrEMBL
Match: A0A0A0KBL1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G430210 PE=4 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 3.3e-28
Identity = 59/61 (96.72%), Postives = 59/61 (96.72%), Query Frame = -1


Query: 161 LLIWKDPKEGNWWMQFGNKYVLGYWPAFLFSYLTDSASMIEWGGEVVNSESDGQHTSTPD 220
           LLIWKDPKEGNWWMQFGNKYVLGYWPAFLFSYLTDSASMIEWGGEVVNSESDGQHTST  
Sbjct: 289 LLIWKDPKEGNWWMQFGNKYVLGYWPAFLFSYLTDSASMIEWGGEVVNSESDGQHTSTQM 348

Query: 221 G 280
           G
Sbjct: 349 G 349

Query: 281  340
           
Sbjct: 409  349

Query: 341  344
           
Sbjct: 469  349

[Close]

BLAST of CU112602 vs. TrEMBL
Match: A0A0A0KBL1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G430210 PE=4 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 2.9e-24
Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = -2


Query: 4   QMGSGHFPGEGFGKAGYFRNIQIVGESNSLRAPEDIGIFTEQPSCYDVQNGKSDD 63
           QMGSGHFPGEGFGKAGYFRNIQIVGESNSLRAPEDIGIFTEQPSCYDVQNGKSDD
Sbjct: 347 QMGSGHFPGEGFGKAGYFRNIQIVGESNSLRAPEDIGIFTEQPSCYDVQNGKSDD 401

Query: 64   123
           
Sbjct: 407  401

Query: 124  169
           
Sbjct: 467  401

HSP 2 Score: 130.2 bits (326), Expect = 1.6e-27
Identity = 63/95 (66.32%), Postives = 68/95 (71.58%), Query Frame = -1


Query: 68  LLIWKDPKEGNWWMQFGNKYVLGYWPAFLFSYLTDSASMIEWGGEVVNSESDGQHTSTPD 127
           +L+WKDPKEGNWWMQFGN YVLGYWPAFLFSYL DSASMIEWGGEVVNSE DGQHTST  
Sbjct: 293 ILVWKDPKEGNWWMQFGNDYVLGYWPAFLFSYLGDSASMIEWGGEVVNSEPDGQHTSTQM 352

Query: 128 G*RPLPR*GLRQS---RLLP*HSDCRRIKQPKGAG 187
           G    P  G  +S   R +        +K PKG G
Sbjct: 353 GSGHFPEEGFSKSSYFRNIQIVDSSNNLKAPKGIG 387

Query: 188  247
           
Sbjct: 413  387

Query: 248  307
           
Sbjct: 473  387

Query: 308  344
           
Sbjct: 533  387

[Close]

BLAST of CU112602 vs. TrEMBL
Match: A5BPH6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_036996 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 6.0e-14
Identity = 38/55 (69.09%), Postives = 44/55 (80.00%), Query Frame = -2


Query: 4   QMGSGHFPGEGFGKAGYFRNIQIVGESNSLRAPEDIGIFTEQPSCYDVQNGKSDD 63
           QMGSGHFP EGF K+ YFRNIQIV  SN+L+AP+ IG FTEQ +CYDVQ G + D
Sbjct: 351 QMGSGHFPEEGFSKSSYFRNIQIVDSSNNLKAPKGIGTFTEQSNCYDVQTGSNGD 405

Query: 64   123
           
Sbjct: 411  405

Query: 124  169
           
Sbjct: 471  405

HSP 2 Score: 130.2 bits (326), Expect = 1.6e-27
Identity = 63/95 (66.32%), Postives = 68/95 (71.58%), Query Frame = -1


Query: 68  LLIWKDPKEGNWWMQFGNKYVLGYWPAFLFSYLTDSASMIEWGGEVVNSESDGQHTSTPD 127
           +L+WKDPKEGNWWMQFGN YVLGYWPAFLFSYL DSASMIEWGGEVVNSE DGQHTST  
Sbjct: 282 ILVWKDPKEGNWWMQFGNDYVLGYWPAFLFSYLGDSASMIEWGGEVVNSEPDGQHTSTQM 341

Query: 128 G*RPLPR*GLRQS---RLLP*HSDCRRIKQPKGAG 187
           G    P  G  +S   R +        +K PKG G
Sbjct: 342 GSGHFPEEGFSKSSYFRNIQIVDSSNNLKAPKGIG 376

Query: 188  247
           
Sbjct: 402  376

Query: 248  307
           
Sbjct: 462  376

Query: 308  344
           
Sbjct: 522  376

[Close]

BLAST of CU112602 vs. TrEMBL
Match: D7SLL3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g00410 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 6.0e-14
Identity = 38/55 (69.09%), Postives = 44/55 (80.00%), Query Frame = -2


Query: 4   QMGSGHFPGEGFGKAGYFRNIQIVGESNSLRAPEDIGIFTEQPSCYDVQNGKSDD 63
           QMGSGHFP EGF K+ YFRNIQIV  SN+L+AP+ IG FTEQ +CYDVQ G + D
Sbjct: 340 QMGSGHFPEEGFSKSSYFRNIQIVDSSNNLKAPKGIGTFTEQSNCYDVQTGSNGD 394

Query: 64   123
           
Sbjct: 400  394

Query: 124  169
           
Sbjct: 460  394

HSP 2 Score: 129.8 bits (325), Expect = 2.1e-27
Identity = 58/73 (79.45%), Postives = 63/73 (86.30%), Query Frame = -1


Query: 125 LLIWKDPKEGNWWMQFGNKYVLGYWPAFLFSYLTDSASMIEWGGEVVNSESDGQHTSTPD 184
           LL+WKDPKEGNWW+QFGN YVLGYWPAFLFSYL+DSASMIEWGGEVVNSESDGQHTST  
Sbjct: 293 LLVWKDPKEGNWWLQFGNSYVLGYWPAFLFSYLSDSASMIEWGGEVVNSESDGQHTSTQM 352

Query: 185 G*RPLPR*GLRQS 244
           G    P+ G  +S
Sbjct: 353 GSGHFPKEGFGKS 365

Query: 245  304
           
Sbjct: 413  365

Query: 305  344
           
Sbjct: 473  365

[Close]

BLAST of CU112602 vs. TrEMBL
Match: A0A0D2NDL6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G241400 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 6.0e-14
Identity = 38/52 (73.08%), Postives = 43/52 (82.69%), Query Frame = -2


Query: 13  QMGSGHFPGEGFGKAGYFRNIQIVGESNSLRAPEDIGIFTEQPSCYDVQNGK 72
           QMGSGHFP EGFGK+ YF+NIQIV  SN+LR P+DI  FTEQ +CYDVQ GK
Sbjct: 351 QMGSGHFPKEGFGKSSYFKNIQIVDGSNNLRVPKDIATFTEQSNCYDVQTGK 402

Query: 73   132
           
Sbjct: 411  402

Query: 133  169
           
Sbjct: 471  402

HSP 2 Score: 129.8 bits (325), Expect = 2.1e-27
Identity = 58/73 (79.45%), Postives = 63/73 (86.30%), Query Frame = -1


Query: 125 LLIWKDPKEGNWWMQFGNKYVLGYWPAFLFSYLTDSASMIEWGGEVVNSESDGQHTSTPD 184
           LL+WKDPKEGNWW+QFGN YVLGYWPAFLFSYL+DSASMIEWGGEVVNSESDGQHTST  
Sbjct: 209 LLVWKDPKEGNWWLQFGNSYVLGYWPAFLFSYLSDSASMIEWGGEVVNSESDGQHTSTQM 268

Query: 185 G*RPLPR*GLRQS 244
           G    P+ G  +S
Sbjct: 269 GSGHFPKEGFGKS 281

Query: 245  304
           
Sbjct: 329  281

Query: 305  344
           
Sbjct: 389  281

[Close]

BLAST of CU112602 vs. NCBI nr
Match: gi|449436230|ref|XP_004135896.1| (PREDICTED: uncharacterized protein LOC101218833 [Cucumis sativus])

HSP 1 Score: 133.3 bits (334), Expect = 2.7e-28
Identity = 59/61 (96.72%), Postives = 59/61 (96.72%), Query Frame = -1


Query: 161 LLIWKDPKEGNWWMQFGNKYVLGYWPAFLFSYLTDSASMIEWGGEVVNSESDGQHTSTPD 220
           LLIWKDPKEGNWWMQFGNKYVLGYWPAFLFSYLTDSASMIEWGGEVVNSESDGQHTST  
Sbjct: 289 LLIWKDPKEGNWWMQFGNKYVLGYWPAFLFSYLTDSASMIEWGGEVVNSESDGQHTSTQM 348

Query: 221 G 280
           G
Sbjct: 349 G 349

Query: 281  340
           
Sbjct: 409  349

Query: 341  344
           
Sbjct: 469  349

[Close]

BLAST of CU112602 vs. NCBI nr
Match: gi|659122585|ref|XP_008461220.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103499872 [Cucumis melo])

HSP 1 Score: 133.3 bits (334), Expect = 2.7e-28
Identity = 59/61 (96.72%), Postives = 59/61 (96.72%), Query Frame = -1


Query: 161 LLIWKDPKEGNWWMQFGNKYVLGYWPAFLFSYLTDSASMIEWGGEVVNSESDGQHTSTPD 220
           LLIWKDPKEGNWWMQFGNKYVLGYWPAFLFSYLTDSASMIEWGGEVVNSESDGQHTST  
Sbjct: 290 LLIWKDPKEGNWWMQFGNKYVLGYWPAFLFSYLTDSASMIEWGGEVVNSESDGQHTSTQM 349

Query: 221 G 280
           G
Sbjct: 350 G 350

Query: 281  340
           
Sbjct: 410  350

Query: 341  344
           
Sbjct: 470  350

[Close]

BLAST of CU112602 vs. NCBI nr
Match: gi|147798997|emb|CAN72570.1| (hypothetical protein VITISV_036996 [Vitis vinifera])

HSP 1 Score: 132.9 bits (333), Expect = 3.6e-28
Identity = 63/95 (66.32%), Postives = 68/95 (71.58%), Query Frame = -1


Query: 68  LLIWKDPKEGNWWMQFGNKYVLGYWPAFLFSYLTDSASMIEWGGEVVNSESDGQHTSTPD 127
           +L+WKDPKEGNWWMQFGN YVLGYWPAFLFSYL DSASMIEWGGEVVNSE DGQHTST  
Sbjct: 293 ILVWKDPKEGNWWMQFGNDYVLGYWPAFLFSYLGDSASMIEWGGEVVNSEPDGQHTSTQM 352

Query: 128 G*RPLPR*GLRQS---RLLP*HSDCRRIKQPKGAG 187
           G    P  G  +S   R +        +K PKG G
Sbjct: 353 GSGHFPEEGFSKSSYFRNIQIVDSSNNLKAPKGIG 387

Query: 188  247
           
Sbjct: 413  387

Query: 248  307
           
Sbjct: 473  387

Query: 308  344
           
Sbjct: 533  387

[Close]

BLAST of CU112602 vs. NCBI nr
Match: gi|297746485|emb|CBI16541.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 132.9 bits (333), Expect = 3.6e-28
Identity = 63/95 (66.32%), Postives = 68/95 (71.58%), Query Frame = -1


Query: 68  LLIWKDPKEGNWWMQFGNKYVLGYWPAFLFSYLTDSASMIEWGGEVVNSESDGQHTSTPD 127
           +L+WKDPKEGNWWMQFGN YVLGYWPAFLFSYL DSASMIEWGGEVVNSE DGQHTST  
Sbjct: 282 ILVWKDPKEGNWWMQFGNDYVLGYWPAFLFSYLGDSASMIEWGGEVVNSEPDGQHTSTQM 341

Query: 128 G*RPLPR*GLRQS---RLLP*HSDCRRIKQPKGAG 187
           G    P  G  +S   R +        +K PKG G
Sbjct: 342 GSGHFPEEGFSKSSYFRNIQIVDSSNNLKAPKGIG 376

Query: 188  247
           
Sbjct: 402  376

Query: 248  307
           
Sbjct: 462  376

Query: 308  344
           
Sbjct: 522  376

[Close]

BLAST of CU112602 vs. NCBI nr
Match: gi|225435772|ref|XP_002285729.1| (PREDICTED: uncharacterized protein LOC100267227 [Vitis vinifera])

HSP 1 Score: 132.9 bits (333), Expect = 3.6e-28
Identity = 63/95 (66.32%), Postives = 68/95 (71.58%), Query Frame = -1


Query: 68  LLIWKDPKEGNWWMQFGNKYVLGYWPAFLFSYLTDSASMIEWGGEVVNSESDGQHTSTPD 127
           +L+WKDPKEGNWWMQFGN YVLGYWPAFLFSYL DSASMIEWGGEVVNSE DGQHTST  
Sbjct: 293 ILVWKDPKEGNWWMQFGNDYVLGYWPAFLFSYLGDSASMIEWGGEVVNSEPDGQHTSTQM 352

Query: 128 G*RPLPR*GLRQS---RLLP*HSDCRRIKQPKGAG 187
           G    P  G  +S   R +        +K PKG G
Sbjct: 353 GSGHFPEEGFSKSSYFRNIQIVDSSNNLKAPKGIG 387

Query: 188  247
           
Sbjct: 413  387

Query: 248  307
           
Sbjct: 473  387

Query: 308  344
           
Sbjct: 533  387

The following BLAST results are available for this feature:

BLAST of CU112602 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KBL1_CUCSA	3.3e-28	96.72	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G430210 PE=4 SV=1	[more]
A0A0A0KBL1_CUCSA	2.9e-24	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G430210 PE=4 SV=1	[more]
A5BPH6_VITVI	6.0e-14	69.09	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_036996 PE=4 SV=1	[more]
D7SLL3_VITVI	6.0e-14	69.09	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g00410 PE=4 SV=...	[more]
A0A0D2NDL6_GOSRA	6.0e-14	73.08	Uncharacterized protein OS=Gossypium raimondii GN=B456_001G241400 PE=4 SV=1	[more]

BLAST of CU112602 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449436230\|ref\|XP_004135896.1\|	2.7e-28	96.72	PREDICTED: uncharacterized protein LOC101218833 [Cucumis sativus]	[more]
gi\|659122585\|ref\|XP_008461220.1\|	2.7e-28	96.72	PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103499872 [Cucumis me...	[more]
gi\|147798997\|emb\|CAN72570.1\|	3.6e-28	66.32	hypothetical protein VITISV_036996 [Vitis vinifera]	[more]
gi\|297746485\|emb\|CBI16541.3\|	3.6e-28	66.32	unnamed protein product [Vitis vinifera]	[more]
gi\|225435772\|ref\|XP_002285729.1\|	3.6e-28	66.32	PREDICTED: uncharacterized protein LOC100267227 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition
IPR004314	Neprosin

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
Csa7G430210	Csa7G430210	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
FKNP3UI02NRXF7	FKNP3UI02NRXF7	EST
G0068005	G0068005	EST

InterPro

Analysis Name: InterPro Annotations of cucumber unigene v3
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004314	Domain of unknown function DUF239	PFAM	PF03080	DUF239	coord: 2..113 score: 1.2
None	No IPR available	PANTHER	PTHR31589	FAMILY NOT NAMED	coord: 1..114 score: 4.5
None	No IPR available	PANTHER	PTHR31589:SF24	SUBFAMILY NOT NAMED	coord: 1..114 score: 4.5