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The following sequences are available for this feature:
transcribed_cluster sequence CCGTCATCGACCAAAGCCCCCCTCGCCCTACCATTTCCCTAACATTATATTCGACCATGACGATGACCACAAGCCTCGTCCTCTTTCAATATCATCCCCGCCGCAGCTCCCGCTCTGGCTTGACCCTCCACCAAATCCTAACTCCTTTTTCTCTGCTGCCCCCGCCATCCACACCTTCTCTGAAAACCCTACATTCTTCCCAGAAAATCAATACCCTTTTTTGTCGGAGGCGTTAACGACGGCCTCTTCGTACACCGTCGCACCCCACATGTCTGCCACCGCACTTCTCCAAAAGGCCGCTCAAATGGGGCCGACCGTAACCCCCACCATATCGCCAATTCTCTTCAATGCCCCCACTGCGACCACCGGCAGGGGATATGGAATGATCAACTCCACCGCTGCCGTTGTGGGATTATCAGATGGCCGTTCGACGATGAAGCCATTGATGGGCGGAGCAAAGGAAGAAATTGGAGGGCATAATTTGACCAGAGATTTTCTCGGCGTCGGAAATCAGGTGGTGCATCTCACCCCGGTGGGTTCCAATCAATACGGTGATCAGAGCCGCCGCAATTAGAGAGAAGATTTTTAGTTTCAGCTCAACCACACACTGGTAGAAGAAAAAAACATTGTATTATGGATAATATAGAAATAAATTAAATGAATGAAATTTTAGACCC
BLAST of CU112547 vs. TrEMBL
Match: A0A0A0LSI1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G085390 PE=4 SV=1) HSP 1 Score: 318.5 bits (815), Expect = 6.3e-84 Identity = 159/184 (86.41%), Postives = 160/184 (86.96%), Query Frame = 2
Query: 20 PSPYHFPNIIFDHDDDHKXXXXXXXXXXXXXXXXXXXXXXNSFFSAAPAIHTFSENPTFF 79
P +HFPNIIFDHDDDHK NSFFSAAPAIHTFSENPTFF
Sbjct: 192 PLAHHFPNIIFDHDDDHKPRPLSISSPPQLPLWLDPPPNPNSFFSAAPAIHTFSENPTFF 251
Query: 80 PENQYPFLSEALTTASSYTVAPHMSATALLQKAAQMGPTVTPTISPILFNAPTATTGRGY 139
PENQYPFLSEALTTASSYTVAPHMSATALLQKAAQMGPTVTPTISPILFNAPTATTGRGY
Sbjct: 252 PENQYPFLSEALTTASSYTVAPHMSATALLQKAAQMGPTVTPTISPILFNAPTATTGRGY 311
Query: 140 GMINSTAAVVGLSDGRSTMKPLMGGAKEEIGGHNLTRDFLGVGNQVVHLTPVGSNQYGDQ 199
GMINSTAAVVGLSDGRSTMKPLMGGAKEEIGGHNLTRDFLGVGNQVVHLTPVGSNQYGDQ
Sbjct: 312 GMINSTAAVVGLSDGRSTMKPLMGGAKEEIGGHNLTRDFLGVGNQVVHLTPVGSNQYGDQ 371
Query: 200 SRRN 259
SRRN
Sbjct: 372 SRRN 375
Query: 260 319
Sbjct: 432 375
Query: 320 379
Sbjct: 492 375
Query: 380 439
Sbjct: 552 375
Query: 440 499
Sbjct: 612 375
Query: 500 559
Sbjct: 672 375
Query: 560 572
Sbjct: 732 375
BLAST of CU112547 vs. NCBI nr
Match: gi|449462075|ref|XP_004148767.1| (PREDICTED: protein indeterminate-domain 2 [Cucumis sativus]) HSP 1 Score: 312.0 bits (798), Expect = 8.5e-82 Identity = 159/184 (86.41%), Postives = 160/184 (86.96%), Query Frame = 2
Query: 20 PSPYHFPNIIFDHDDDHKXXXXXXXXXXXXXXXXXXXXXXNSFFSAAPAIHTFSENPTFF 79
P +HFPNIIFDHDDDHK NSFFSAAPAIHTFSENPTFF
Sbjct: 240 PLAHHFPNIIFDHDDDHKPRPLSISSPPQLPLWLDPPPNPNSFFSAAPAIHTFSENPTFF 299
Query: 80 PENQYPFLSEALTTASSYTVAPHMSATALLQKAAQMGPTVTPTISPILFNAPTATTGRGY 139
PENQYPFLSEALTTASSYTVAPHMSATALLQKAAQMGPTVTPTISPILFNAPTATTGRGY
Sbjct: 300 PENQYPFLSEALTTASSYTVAPHMSATALLQKAAQMGPTVTPTISPILFNAPTATTGRGY 359
Query: 140 GMINSTAAVVGLSDGRSTMKPLMGGAKEEIGGHNLTRDFLGVGNQVVHLTPVGSNQYGDQ 199
GMINSTAAVVGLSDGRSTMKPLMGGAKEEIGGHNLTRDFLGVGNQVVHLTPVGSNQYGDQ
Sbjct: 360 GMINSTAAVVGLSDGRSTMKPLMGGAKEEIGGHNLTRDFLGVGNQVVHLTPVGSNQYGDQ 419
Query: 200 SRRN 259
SRRN
Sbjct: 420 SRRN 423
Query: 260 319
Sbjct: 480 423
Query: 320 379
Sbjct: 540 423
Query: 380 439
Sbjct: 600 423
Query: 440 499
Sbjct: 660 423
Query: 500 559
Sbjct: 720 423
Query: 560 572
Sbjct: 780 423
BLAST of CU112547 vs. NCBI nr
Match: gi|700209647|gb|KGN64743.1| (hypothetical protein Csa_1G085390 [Cucumis sativus]) HSP 1 Score: 312.0 bits (798), Expect = 8.5e-82 Identity = 159/184 (86.41%), Postives = 160/184 (86.96%), Query Frame = 2
Query: 20 PSPYHFPNIIFDHDDDHKXXXXXXXXXXXXXXXXXXXXXXNSFFSAAPAIHTFSENPTFF 79
P +HFPNIIFDHDDDHK NSFFSAAPAIHTFSENPTFF
Sbjct: 192 PLAHHFPNIIFDHDDDHKPRPLSISSPPQLPLWLDPPPNPNSFFSAAPAIHTFSENPTFF 251
Query: 80 PENQYPFLSEALTTASSYTVAPHMSATALLQKAAQMGPTVTPTISPILFNAPTATTGRGY 139
PENQYPFLSEALTTASSYTVAPHMSATALLQKAAQMGPTVTPTISPILFNAPTATTGRGY
Sbjct: 252 PENQYPFLSEALTTASSYTVAPHMSATALLQKAAQMGPTVTPTISPILFNAPTATTGRGY 311
Query: 140 GMINSTAAVVGLSDGRSTMKPLMGGAKEEIGGHNLTRDFLGVGNQVVHLTPVGSNQYGDQ 199
GMINSTAAVVGLSDGRSTMKPLMGGAKEEIGGHNLTRDFLGVGNQVVHLTPVGSNQYGDQ
Sbjct: 312 GMINSTAAVVGLSDGRSTMKPLMGGAKEEIGGHNLTRDFLGVGNQVVHLTPVGSNQYGDQ 371
Query: 200 SRRN 259
SRRN
Sbjct: 372 SRRN 375
Query: 260 319
Sbjct: 432 375
Query: 320 379
Sbjct: 492 375
Query: 380 439
Sbjct: 552 375
Query: 440 499
Sbjct: 612 375
Query: 500 559
Sbjct: 672 375
Query: 560 572
Sbjct: 732 375
BLAST of CU112547 vs. NCBI nr
Match: gi|659072182|ref|XP_008463785.1| (PREDICTED: zinc finger protein JACKDAW-like [Cucumis melo]) HSP 1 Score: 295.4 bits (755), Expect = 8.2e-77 Identity = 150/181 (82.87%), Postives = 155/181 (85.64%), Query Frame = 2
Query: 29 YHFPNIIFDHDDDHKXXXXXXXXXXXXXXXXXXXXXXNSFFSAAPAIHTFSENPTFFPEN 88
+HFPNIIFDHDDDHK NSFFSAAPAIHTFSENPTFFPEN
Sbjct: 192 HHFPNIIFDHDDDHKPPPLSLSSQPQLPLWLDPPPNSNSFFSAAPAIHTFSENPTFFPEN 251
Query: 89 QYPFLSEALTTASSYTVAPHMSATALLQKAAQMGPTVTPTISPILFNAPTATTGRGYGMI 148
QYPFLSE LTTASSYTVAPHMSATALLQKAAQMGPT+TPTISPILFNAPTATTGRGYGMI
Sbjct: 252 QYPFLSEPLTTASSYTVAPHMSATALLQKAAQMGPTLTPTISPILFNAPTATTGRGYGMI 311
Query: 149 NSTAAVVGLSDGRSTMKPLMGGAKEEIGGHNLTRDFLGVGNQVVHLTPVGSNQYGDQSRR 208
NSTAAV GLSDG STMKPLMGGAKEEIGG NLTRDFLGVGNQV+HLTPVGSN+YGDQSRR
Sbjct: 312 NSTAAVAGLSDGCSTMKPLMGGAKEEIGGQNLTRDFLGVGNQVMHLTPVGSNRYGDQSRR 371
Query: 209 N 268
+
Sbjct: 372 S 372
Query: 269 328
Sbjct: 432 372
Query: 329 388
Sbjct: 492 372
Query: 389 448
Sbjct: 552 372
Query: 449 508
Sbjct: 612 372
Query: 509 568
Sbjct: 672 372
Query: 569 572
Sbjct: 732 372
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0LSI1_CUCSA | 6.3e-84 | 86.41 | Uncharacterized protein OS=Cucumis sativus GN=Csa_1G085390 PE=4 SV=1 | [more] |
This transcribed_cluster is associated with the following gene feature(s):
The following EST feature(s) are a part of this transcribed_cluster:
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