CU112049 (transcribed_cluster) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CU112049
Type	transcribed_cluster
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Equilibrative nucleoside transporter 4
Location	Chr1 : 11407863 .. 11408338 (+)
Sequence length	237

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

CGGCCGGGGGTCTACTTTAAATGAAGTGAGTATGGCGGTGAGTGACGAAGATGCTCATGTTGCAAGGCTTAAGGGGAAATATGCTGCAATGGTTGTGTGCTGGCTTCTTGGGAATGGATGCCTCTTTTCTTGGAACAGTATGCTGACCATTGAAGATTACTATGGCTATTTGTTCCCGAAATACCACTCTTCAAGAGTTCTTACTCTTGTGTATCAGCCGTTTGCCCTCGTAACAAT

Library


Library category	ESTs
fruit (8DPP) library	2

Homology

[Close]

BLAST of CU112049 vs. Swiss-Prot
Match: ENT3_ARATH (Equilibrative nucleotide transporter 3 OS=Arabidopsis thaliana GN=ENT3 PE=1 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 5.7e-17
Identity = 45/68 (66.18%), Postives = 48/68 (70.59%), Query Frame = 2


Query: 32  MAVSDEDAHVARLKGKYAAMVVCWLLGNGCLFSWNSMLTIEDYYGYLFPKYHSSRVLTLV 91
           MA   E+    +L+GKY AMVVC +LG G L SWNSMLTI DYY  +FP YH SRVLTLV
Sbjct: 1   MADRYENQPPEKLQGKYQAMVVCCILGIGSLVSWNSMLTIADYYYKVFPDYHPSRVLTLV 60

Query: 92  YQPFALVT 151
           YQPFAL T
Sbjct: 61  YQPFALGT 68

Query: 152  211
           
Sbjct: 121  68

Query: 212  236
           
Sbjct: 181  68

[Close]

BLAST of CU112049 vs. Swiss-Prot
Match: ENT2_ARATH (Equilibrative nucleotide transporter 2 OS=Arabidopsis thaliana GN=ENT2 PE=2 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 2.2e-16
Identity = 36/53 (67.92%), Postives = 41/53 (77.36%), Query Frame = 2


Query: 71  KGKYAAMVVCWLLGNGCLFSWNSMLTIEDYYGYLFPKYHSSRVLTLVYQPFAL 130
           KGK  A+ VCWLLG GCL +WNSMLTI DYY YLFP YH SR+LT++YQ F++
Sbjct: 13  KGKNYALAVCWLLGVGCLLAWNSMLTIVDYYAYLFPWYHPSRILTIIYQSFSI 65

Query: 131  190
           
Sbjct: 73   65

Query: 191  230
           
Sbjct: 133  65

[Close]

BLAST of CU112049 vs. Swiss-Prot
Match: ENT4_ARATH (Equilibrative nucleotide transporter 4 OS=Arabidopsis thaliana GN=ENT4 PE=1 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 2.2e-16
Identity = 43/68 (63.24%), Postives = 46/68 (67.65%), Query Frame = 2


Query: 32  MAVSDEDAHVARLKGKYAAMVVCWLLGNGCLFSWNSMLTIEDYYGYLFPKYHSSRVLTLV 91
           MA   E+     L+GKY AMVVC +LG G LFSWNSMLTI DYY  +FP YH SRV TL+
Sbjct: 1   MADGYENHAPENLQGKYQAMVVCCILGIGSLFSWNSMLTIADYYYQVFPDYHPSRVFTLI 60

Query: 92  YQPFALVT 151
           YQP AL T
Sbjct: 61  YQPIALGT 68

Query: 152  211
           
Sbjct: 121  68

Query: 212  236
           
Sbjct: 181  68

[Close]

BLAST of CU112049 vs. Swiss-Prot
Match: ENT5_ARATH (Equilibrative nucleotide transporter 5 OS=Arabidopsis thaliana GN=ENT5 PE=2 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 2.0e-14
Identity = 38/68 (55.88%), Postives = 44/68 (64.71%), Query Frame = 2


Query: 32  MAVSDEDAHVARLKGKYAAMVVCWLLGNGCLFSWNSMLTIEDYYGYLFPKYHSSRVLTLV 91
           M    E+     L GKY AMVVC +LG G L SWNS+L++ DYY  +FP YH SRVLT V
Sbjct: 1   MVARFENQAPENLHGKYQAMVVCCILGIGSLVSWNSLLSVGDYYYQVFPDYHPSRVLTFV 60

Query: 92  YQPFALVT 151
           YQPF++ T
Sbjct: 61  YQPFSIGT 68

Query: 152  211
           
Sbjct: 121  68

Query: 212  236
           
Sbjct: 181  68

[Close]

BLAST of CU112049 vs. Swiss-Prot
Match: ENT6_ARATH (Equilibrative nucleotide transporter 6 OS=Arabidopsis thaliana GN=ENT6 PE=1 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 2.6e-14
Identity = 37/54 (68.52%), Postives = 40/54 (74.07%), Query Frame = 2


Query: 65  RLKGKYAAMVVCWLLGNGCLFSWNSMLTIEDYYGYLFPKYHSSRVLTLVYQPFA 124
           +L+GKY AM+V  +LG G L SWNSMLT  DYY  +FP YH SRVLTLVYQPFA
Sbjct: 12  KLRGKYQAMIVYCILGFGSLISWNSMLTTADYYYKVFPDYHPSRVLTLVYQPFA 65

Query: 125  184
           
Sbjct: 72   65

Query: 185  227
           
Sbjct: 132  65

[Close]

BLAST of CU112049 vs. TrEMBL
Match: A0A0A0LW80_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G192690 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 2.5e-32
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 2


Query: 32  MAVSDEDAHVARLKGKYAAMVVCWLLGNGCLFSWNSMLTIEDYYGYLFPKYHSSRVLTLV 91
           MAVSDEDAHVARLKGKYAAMVVCWLLGNGCLFSWNSMLTIEDYYGYLFPKYHSSRVLTLV
Sbjct: 1   MAVSDEDAHVARLKGKYAAMVVCWLLGNGCLFSWNSMLTIEDYYGYLFPKYHSSRVLTLV 60

Query: 92  YQPFALVT 151
           YQPFALVT
Sbjct: 61  YQPFALVT 68

Query: 152  211
           
Sbjct: 121  68

Query: 212  236
           
Sbjct: 181  68

[Close]

BLAST of CU112049 vs. TrEMBL
Match: W9RAP5_9ROSA (Equilibrative nucleoside transporter 4 OS=Morus notabilis GN=L484_022213 PE=4 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 5.7e-24
Identity = 56/68 (82.35%), Postives = 60/68 (88.24%), Query Frame = 2


Query: 32  MAVSDEDAHVARLKGKYAAMVVCWLLGNGCLFSWNSMLTIEDYYGYLFPKYHSSRVLTLV 91
           MA  +E+   ARL+GKYAA+VVCWLLGNGCLFSWNSMLTIEDYYG LFP YHSSRVLTLV
Sbjct: 1   MANLEENGPPARLEGKYAAIVVCWLLGNGCLFSWNSMLTIEDYYGELFPHYHSSRVLTLV 60

Query: 92  YQPFALVT 151
           YQPFAL T
Sbjct: 61  YQPFALGT 68

Query: 152  211
           
Sbjct: 121  68

Query: 212  236
           
Sbjct: 181  68

[Close]

BLAST of CU112049 vs. TrEMBL
Match: A0A061E4K8_THECC (Major facilitator superfamily protein isoform 2 OS=Theobroma cacao GN=TCM_007894 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 1.7e-23
Identity = 53/57 (92.98%), Postives = 54/57 (94.74%), Query Frame = 2


Query: 65  RLKGKYAAMVVCWLLGNGCLFSWNSMLTIEDYYGYLFPKYHSSRVLTLVYQPFALVT 124
           RL+GKYAAMVVCWLLGNGCLFSWNSMLTIEDYYGYLFP YH SRVLTLVYQPFAL T
Sbjct: 10  RLEGKYAAMVVCWLLGNGCLFSWNSMLTIEDYYGYLFPHYHPSRVLTLVYQPFALGT 66

Query: 125  184
           
Sbjct: 70   66

Query: 185  236
           
Sbjct: 130  66

[Close]

BLAST of CU112049 vs. TrEMBL
Match: A0A061E2V7_THECC (Major facilitator superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_007894 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 1.7e-23
Identity = 53/57 (92.98%), Postives = 54/57 (94.74%), Query Frame = 2


Query: 65  RLKGKYAAMVVCWLLGNGCLFSWNSMLTIEDYYGYLFPKYHSSRVLTLVYQPFALVT 124
           RL+GKYAAMVVCWLLGNGCLFSWNSMLTIEDYYGYLFP YH SRVLTLVYQPFAL T
Sbjct: 10  RLEGKYAAMVVCWLLGNGCLFSWNSMLTIEDYYGYLFPHYHPSRVLTLVYQPFALGT 66

Query: 125  184
           
Sbjct: 70   66

Query: 185  236
           
Sbjct: 130  66

[Close]

BLAST of CU112049 vs. TrEMBL
Match: C6T8P0_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 2.2e-23
Identity = 52/57 (91.23%), Postives = 55/57 (96.49%), Query Frame = 2


Query: 65  RLKGKYAAMVVCWLLGNGCLFSWNSMLTIEDYYGYLFPKYHSSRVLTLVYQPFALVT 124
           RL+GKYAA+VVCWLLGNGCLFSWNSMLTIEDYYGYLFPKYH SRVLTLVYQPFA+ T
Sbjct: 9   RLEGKYAAIVVCWLLGNGCLFSWNSMLTIEDYYGYLFPKYHPSRVLTLVYQPFAVGT 65

Query: 125  184
           
Sbjct: 69   65

Query: 185  236
           
Sbjct: 129  65

[Close]

BLAST of CU112049 vs. NCBI nr
Match: gi|659118126|ref|XP_008458960.1| (PREDICTED: equilibrative nucleotide transporter 3-like isoform X1 [Cucumis melo])

HSP 1 Score: 152.1 bits (383), Expect = 3.9e-34
Identity = 73/75 (97.33%), Postives = 73/75 (97.33%), Query Frame = 2


Query: 11  STLNEVSMAVSDEDAHVARLKGKYAAMVVCWLLGNGCLFSWNSMLTIEDYYGYLFPKYHS 70
           STLNEVSM VSDEDA VARLKGKYAAMVVCWLLGNGCLFSWNSMLTIEDYYGYLFPKYHS
Sbjct: 2   STLNEVSMVVSDEDADVARLKGKYAAMVVCWLLGNGCLFSWNSMLTIEDYYGYLFPKYHS 61

Query: 71  SRVLTLVYQPFALVT 130
           SRVLTLVYQPFALVT
Sbjct: 62  SRVLTLVYQPFALVT 76

Query: 131  190
           
Sbjct: 122  76

Query: 191  236
           
Sbjct: 182  76

[Close]

BLAST of CU112049 vs. NCBI nr
Match: gi|700209976|gb|KGN65072.1| (hypothetical protein Csa_1G192690 [Cucumis sativus])

HSP 1 Score: 144.8 bits (364), Expect = 6.2e-32
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 2


Query: 32  MAVSDEDAHVARLKGKYAAMVVCWLLGNGCLFSWNSMLTIEDYYGYLFPKYHSSRVLTLV 91
           MAVSDEDAHVARLKGKYAAMVVCWLLGNGCLFSWNSMLTIEDYYGYLFPKYHSSRVLTLV
Sbjct: 1   MAVSDEDAHVARLKGKYAAMVVCWLLGNGCLFSWNSMLTIEDYYGYLFPKYHSSRVLTLV 60

Query: 92  YQPFALVT 151
           YQPFALVT
Sbjct: 61  YQPFALVT 68

Query: 152  211
           
Sbjct: 121  68

Query: 212  236
           
Sbjct: 181  68

[Close]

BLAST of CU112049 vs. NCBI nr
Match: gi|659118128|ref|XP_008458961.1| (PREDICTED: equilibrative nucleotide transporter 3-like isoform X2 [Cucumis melo])

HSP 1 Score: 139.8 bits (351), Expect = 2.0e-30
Identity = 66/68 (97.06%), Postives = 66/68 (97.06%), Query Frame = 2


Query: 32  MAVSDEDAHVARLKGKYAAMVVCWLLGNGCLFSWNSMLTIEDYYGYLFPKYHSSRVLTLV 91
           M VSDEDA VARLKGKYAAMVVCWLLGNGCLFSWNSMLTIEDYYGYLFPKYHSSRVLTLV
Sbjct: 1   MVVSDEDADVARLKGKYAAMVVCWLLGNGCLFSWNSMLTIEDYYGYLFPKYHSSRVLTLV 60

Query: 92  YQPFALVT 151
           YQPFALVT
Sbjct: 61  YQPFALVT 68

Query: 152  211
           
Sbjct: 121  68

Query: 212  236
           
Sbjct: 181  68

[Close]

BLAST of CU112049 vs. NCBI nr
Match: gi|1009127990|ref|XP_015880986.1| (PREDICTED: equilibrative nucleotide transporter 3-like [Ziziphus jujuba])

HSP 1 Score: 118.6 bits (296), Expect = 4.8e-24
Identity = 55/64 (85.94%), Postives = 57/64 (89.06%), Query Frame = 2


Query: 44  DEDAHVARLKGKYAAMVVCWLLGNGCLFSWNSMLTIEDYYGYLFPKYHSSRVLTLVYQPF 103
           DE+   ARL+GKY AMVVCWLLGNGCLFSWNSMLTIEDYYGYLFP YH SRVLTLVYQPF
Sbjct: 5   DENGPPARLEGKYGAMVVCWLLGNGCLFSWNSMLTIEDYYGYLFPDYHPSRVLTLVYQPF 64

Query: 104 ALVT 163
           AL T
Sbjct: 65  ALGT 68

Query: 164  223
           
Sbjct: 125  68

Query: 224  236
           
Sbjct: 185  68

[Close]

BLAST of CU112049 vs. NCBI nr
Match: gi|703096481|ref|XP_010095856.1| (Equilibrative nucleoside transporter 4 [Morus notabilis])

HSP 1 Score: 117.1 bits (292), Expect = 1.4e-23
Identity = 56/68 (82.35%), Postives = 60/68 (88.24%), Query Frame = 2


Query: 32  MAVSDEDAHVARLKGKYAAMVVCWLLGNGCLFSWNSMLTIEDYYGYLFPKYHSSRVLTLV 91
           MA  +E+   ARL+GKYAA+VVCWLLGNGCLFSWNSMLTIEDYYG LFP YHSSRVLTLV
Sbjct: 1   MANLEENGPPARLEGKYAAIVVCWLLGNGCLFSWNSMLTIEDYYGELFPHYHSSRVLTLV 60

Query: 92  YQPFALVT 151
           YQPFAL T
Sbjct: 61  YQPFALGT 68

Query: 152  211
           
Sbjct: 121  68

Query: 212  236
           
Sbjct: 181  68

The following BLAST results are available for this feature:

BLAST of CU112049 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ENT3_ARATH	5.7e-17	66.18	Equilibrative nucleotide transporter 3 OS=Arabidopsis thaliana GN=ENT3 PE=1 SV=1	[more]
ENT2_ARATH	2.2e-16	67.92	Equilibrative nucleotide transporter 2 OS=Arabidopsis thaliana GN=ENT2 PE=2 SV=1	[more]
ENT4_ARATH	2.2e-16	63.24	Equilibrative nucleotide transporter 4 OS=Arabidopsis thaliana GN=ENT4 PE=1 SV=1	[more]
ENT5_ARATH	2.0e-14	55.88	Equilibrative nucleotide transporter 5 OS=Arabidopsis thaliana GN=ENT5 PE=2 SV=1	[more]
ENT6_ARATH	2.6e-14	68.52	Equilibrative nucleotide transporter 6 OS=Arabidopsis thaliana GN=ENT6 PE=1 SV=1	[more]

BLAST of CU112049 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LW80_CUCSA	2.5e-32	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G192690 PE=4 SV=1	[more]
W9RAP5_9ROSA	5.7e-24	82.35	Equilibrative nucleoside transporter 4 OS=Morus notabilis GN=L484_022213 PE=4 SV...	[more]
A0A061E4K8_THECC	1.7e-23	92.98	Major facilitator superfamily protein isoform 2 OS=Theobroma cacao GN=TCM_007894...	[more]
A0A061E2V7_THECC	1.7e-23	92.98	Major facilitator superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_007894...	[more]
C6T8P0_SOYBN	2.2e-23	91.23	Putative uncharacterized protein OS=Glycine max PE=2 SV=1	[more]

BLAST of CU112049 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659118126\|ref\|XP_008458960.1\|	3.9e-34	97.33	PREDICTED: equilibrative nucleotide transporter 3-like isoform X1 [Cucumis melo]	[more]
gi\|700209976\|gb\|KGN65072.1\|	6.2e-32	100.00	hypothetical protein Csa_1G192690 [Cucumis sativus]	[more]
gi\|659118128\|ref\|XP_008458961.1\|	2.0e-30	97.06	PREDICTED: equilibrative nucleotide transporter 3-like isoform X2 [Cucumis melo]	[more]
gi\|1009127990\|ref\|XP_015880986.1\|	4.8e-24	85.94	PREDICTED: equilibrative nucleotide transporter 3-like [Ziziphus jujuba]	[more]
gi\|703096481\|ref\|XP_010095856.1\|	1.4e-23	82.35	Equilibrative nucleoside transporter 4 [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition
IPR002259	Eqnu_transpt

Vocabulary: **Molecular Function**
Term	Definition
GO:0005337	nucleoside transmembrane transporter activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006810	transport

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

GO Annotation

GO Assignments

This transcribed_cluster is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006810	transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005337	nucleoside transmembrane transporter activity

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
Csa1G192690	Csa1G192690	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
FKNP3UI02N2FMM	FKNP3UI02N2FMM	EST
FKNP3UI02O52ZR	FKNP3UI02O52ZR	EST

InterPro

Analysis Name: InterPro Annotations of cucumber unigene v3
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002259	Equilibrative nucleoside transporter	PANTHER	PTHR10332	EQUILIBRATIVE NUCLEOSIDE TRANSPORTER	coord: 5..79 score: 2.8