CU111064 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU111064
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionPhosphatidic acid phosphatase family protein isoform 1
LocationChr4 : 10868456 .. 10868766 (+)
Sequence length320
The following sequences are available for this feature:

transcribed_cluster sequence

CGGCCGGGGGGCAGCATTTTCTTGCTTCGTCCACCACTTCAAGTTTGCATCGCCCGTTCCTAATTCGATTCTCTCCCTGGCGACAAATCTTACTTGTTTTTCTCCGATCTCACGCATTCGAATTCCTTTCCTCTCCGATCCGATCTATTTATGGTTCTCTCCTTCTAGTTCCTCCTTTGAAATTTGATTCCACTAATTCCATGGCGGCGGCACCACTCAAGGCTGTGTCTTTGACCCATGTCCGCTACCAGAGGGGAGATCAGCTCGGCCATTTCTTAGCTTGGGTTTCTTTGGTCCCCGTCTTCATTAGTCTTGGTGGA
BLAST of CU111064 vs. Swiss-Prot
Match: LPPG_ARATH (Lipid phosphate phosphatase gamma, chloroplastic OS=Arabidopsis thaliana GN=LPPG PE=1 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 4.8e-11
Identity = 31/35 (88.57%), Postives = 32/35 (91.43%), Query Frame = 3

Query: 216 LKAVSLTHVRYQRGDQLGHFLAWVSLVPVFISLGG 275
           LKAV+LTHVRY+ GDQLGHFLAW+SLVPVFISLGG
Sbjct: 8   LKAVTLTHVRYRPGDQLGHFLAWISLVPVFISLGG 42

Query: 276 321
           
Sbjct: 68  42

BLAST of CU111064 vs. TrEMBL
Match: A0A0A0L0F3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G280490 PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 1.6e-13
Identity = 40/40 (100.00%), Postives = 40/40 (100.00%), Query Frame = 3

Query: 201 MAAAPLKAVSLTHVRYQRGDQLGHFLAWVSLVPVFISLGG 260
           MAAAPLKAVSLTHVRYQRGDQLGHFLAWVSLVPVFISLGG
Sbjct: 1   MAAAPLKAVSLTHVRYQRGDQLGHFLAWVSLVPVFISLGG 40

Query: 261 320
           
Sbjct: 61  40

BLAST of CU111064 vs. TrEMBL
Match: A0A067DZ31_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g027358mg PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 2.6e-11
Identity = 35/40 (87.50%), Postives = 38/40 (95.00%), Query Frame = 3

Query: 201 MAAAPLKAVSLTHVRYQRGDQLGHFLAWVSLVPVFISLGG 260
           MA  PLKAV+LTHVRY++GDQLGHFLAWVSLVPVFISLGG
Sbjct: 1   MATPPLKAVTLTHVRYRKGDQLGHFLAWVSLVPVFISLGG 40

Query: 261 320
           
Sbjct: 61  40

BLAST of CU111064 vs. TrEMBL
Match: V4SXZ4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012685mg PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 2.6e-11
Identity = 35/40 (87.50%), Postives = 38/40 (95.00%), Query Frame = 3

Query: 201 MAAAPLKAVSLTHVRYQRGDQLGHFLAWVSLVPVFISLGG 260
           MA  PLKAV+LTHVRY++GDQLGHFLAWVSLVPVFISLGG
Sbjct: 1   MATPPLKAVTLTHVRYRKGDQLGHFLAWVSLVPVFISLGG 40

Query: 261 320
           
Sbjct: 61  40

BLAST of CU111064 vs. TrEMBL
Match: A0A061ET08_THECC (Phosphatidic acid phosphatase family protein isoform 3 (Fragment) OS=Theobroma cacao GN=TCM_022106 PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 9.8e-11
Identity = 34/36 (94.44%), Postives = 36/36 (100.00%), Query Frame = 3

Query: 213 PLKAVSLTHVRYQRGDQLGHFLAWVSLVPVFISLGG 272
           PLKAV+LTHVRYQRGD+LGHFLAWVSLVPVFISLGG
Sbjct: 71  PLKAVTLTHVRYQRGDRLGHFLAWVSLVPVFISLGG 106

Query: 273 321
           
Sbjct: 131 106

BLAST of CU111064 vs. TrEMBL
Match: A0A061ESH3_THECC (Phosphatidic acid phosphatase family protein isoform 1 OS=Theobroma cacao GN=TCM_022106 PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 9.8e-11
Identity = 34/36 (94.44%), Postives = 36/36 (100.00%), Query Frame = 3

Query: 213 PLKAVSLTHVRYQRGDQLGHFLAWVSLVPVFISLGG 272
           PLKAV+LTHVRYQRGD+LGHFLAWVSLVPVFISLGG
Sbjct: 80  PLKAVTLTHVRYQRGDRLGHFLAWVSLVPVFISLGG 115

Query: 273 321
           
Sbjct: 140 115

BLAST of CU111064 vs. NCBI nr
Match: gi|449448826|ref|XP_004142166.1| (PREDICTED: lipid phosphate phosphatase gamma, chloroplastic [Cucumis sativus])

HSP 1 Score: 84.3 bits (207), Expect = 1.4e-13
Identity = 40/40 (100.00%), Postives = 40/40 (100.00%), Query Frame = 3

Query: 201 MAAAPLKAVSLTHVRYQRGDQLGHFLAWVSLVPVFISLGG 260
           MAAAPLKAVSLTHVRYQRGDQLGHFLAWVSLVPVFISLGG
Sbjct: 1   MAAAPLKAVSLTHVRYQRGDQLGHFLAWVSLVPVFISLGG 40

Query: 261 320
           
Sbjct: 61  40

BLAST of CU111064 vs. NCBI nr
Match: gi|659097780|ref|XP_008449810.1| (PREDICTED: lipid phosphate phosphatase gamma, chloroplastic [Cucumis melo])

HSP 1 Score: 84.3 bits (207), Expect = 1.4e-13
Identity = 40/40 (100.00%), Postives = 40/40 (100.00%), Query Frame = 3

Query: 201 MAAAPLKAVSLTHVRYQRGDQLGHFLAWVSLVPVFISLGG 260
           MAAAPLKAVSLTHVRYQRGDQLGHFLAWVSLVPVFISLGG
Sbjct: 1   MAAAPLKAVSLTHVRYQRGDQLGHFLAWVSLVPVFISLGG 40

Query: 261 320
           
Sbjct: 61  40

BLAST of CU111064 vs. NCBI nr
Match: gi|641828962|gb|KDO48096.1| (hypothetical protein CISIN_1g027358mg [Citrus sinensis])

HSP 1 Score: 77.0 bits (188), Expect = 2.2e-11
Identity = 35/40 (87.50%), Postives = 38/40 (95.00%), Query Frame = 3

Query: 201 MAAAPLKAVSLTHVRYQRGDQLGHFLAWVSLVPVFISLGG 260
           MA  PLKAV+LTHVRY++GDQLGHFLAWVSLVPVFISLGG
Sbjct: 1   MATPPLKAVTLTHVRYRKGDQLGHFLAWVSLVPVFISLGG 40

Query: 261 320
           
Sbjct: 61  40

BLAST of CU111064 vs. NCBI nr
Match: gi|567872491|ref|XP_006428835.1| (hypothetical protein CICLE_v10012685mg [Citrus clementina])

HSP 1 Score: 77.0 bits (188), Expect = 2.2e-11
Identity = 35/40 (87.50%), Postives = 38/40 (95.00%), Query Frame = 3

Query: 201 MAAAPLKAVSLTHVRYQRGDQLGHFLAWVSLVPVFISLGG 260
           MA  PLKAV+LTHVRY++GDQLGHFLAWVSLVPVFISLGG
Sbjct: 1   MATPPLKAVTLTHVRYRKGDQLGHFLAWVSLVPVFISLGG 40

Query: 261 320
           
Sbjct: 61  40

BLAST of CU111064 vs. NCBI nr
Match: gi|568854047|ref|XP_006480647.1| (PREDICTED: lipid phosphate phosphatase gamma, chloroplastic [Citrus sinensis])

HSP 1 Score: 77.0 bits (188), Expect = 2.2e-11
Identity = 35/40 (87.50%), Postives = 38/40 (95.00%), Query Frame = 3

Query: 201 MAAAPLKAVSLTHVRYQRGDQLGHFLAWVSLVPVFISLGG 260
           MA  PLKAV+LTHVRY++GDQLGHFLAWVSLVPVFISLGG
Sbjct: 1   MATPPLKAVTLTHVRYRKGDQLGHFLAWVSLVPVFISLGG 40

Query: 261 320
           
Sbjct: 61  40

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
LPPG_ARATH4.8e-1188.57Lipid phosphate phosphatase gamma, chloroplastic OS=Arabidopsis thaliana GN=LPPG... [more]
Match NameE-valueIdentityDescription
A0A0A0L0F3_CUCSA1.6e-13100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G280490 PE=4 SV=1[more]
A0A067DZ31_CITSI2.6e-1187.50Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g027358mg PE=4 SV=1[more]
V4SXZ4_9ROSI2.6e-1187.50Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012685mg PE=4 SV=1[more]
A0A061ET08_THECC9.8e-1194.44Phosphatidic acid phosphatase family protein isoform 3 (Fragment) OS=Theobroma c... [more]
A0A061ESH3_THECC9.8e-1194.44Phosphatidic acid phosphatase family protein isoform 1 OS=Theobroma cacao GN=TCM... [more]
Match NameE-valueIdentityDescription
gi|449448826|ref|XP_004142166.1|1.4e-13100.00PREDICTED: lipid phosphate phosphatase gamma, chloroplastic [Cucumis sativus][more]
gi|659097780|ref|XP_008449810.1|1.4e-13100.00PREDICTED: lipid phosphate phosphatase gamma, chloroplastic [Cucumis melo][more]
gi|641828962|gb|KDO48096.1|2.2e-1187.50hypothetical protein CISIN_1g027358mg [Citrus sinensis][more]
gi|567872491|ref|XP_006428835.1|2.2e-1187.50hypothetical protein CICLE_v10012685mg [Citrus clementina][more]
gi|568854047|ref|XP_006480647.1|2.2e-1187.50PREDICTED: lipid phosphate phosphatase gamma, chloroplastic [Citrus sinensis][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa4G280490Csa4G280490gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
FKNP3UI02N760JFKNP3UI02N760JEST
FKNP3UI02NE1T3FKNP3UI02NE1T3EST
FKNP3UI02O19FXFKNP3UI02O19FXEST
H0111022H0111022EST