CU110541 (transcribed_cluster) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CU110541
Type	transcribed_cluster
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Unknown protein
Location	Chr1 : 4727576 .. 4731332 (-)
Sequence length	683

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

TGATAACAAAGGGAAATTGACCATATATTGAGCTAGATGAGATGTCACTGTTACAAGACAAGGGGGCAATGCTCAAATCTAAGCACAATAAAGCGTGTGGCCAATATCAAATGTGAATTTATCAGCCATTCACAAAATCCAGAGTGAACTCATAACTCAACTAAATACAATTCAGAATACGTTTTCTTACCGTTATTTTCCTCGTCCAGCCGGCCCCAAATATGAAAACCACATTAGATTCCCCAGCTCGGTATGCGTCGAGGATCTCCCGAACAATCAGTAATCATCAATCGAGATCTTCCTGCATTGGCTCGGAAGAACCCTGGCTTCCCCTATTTCTGGAGCTAGGTTCGTCGTTATTTCCACTGTTGTTGCCACCTCCACTATTACTAGTCTCAGCAGCTGAACCAAATCCTCTGAAGGGCCAAGGAAAAGCTATCCTCCTAACCCTCCGCTCTCCCATTTGTTGAGTCTGCGAGTTCTCGTCAGAATTAGGATCGCTTCCGACAACATTTTCCCCACCAGTGGAAGAATCCCCAAAGGGTTGACTTTCGCTTTGACTCCGATTAGGAGCTGAAGACCCACGAGTTCTTTGCTCGTAATCGGGATCATCTGTGGGCAATTCATATCGACATACTGGACAAGAATTATGCAATTCCAACCAAGGAATTATACAATCTGCA

Library


Library category	ESTs
fruit (8DPP) library	2
gynoecious flower library	5
hermaphrodite flower library	2

Homology

[Close]

BLAST of CU110541 vs. Swiss-Prot
Match: RING1_GOSHI (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum GN=RING1 PE=1 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 4.8e-16
Identity = 42/91 (46.15%), Postives = 54/91 (59.34%), Query Frame = -2


Query: 407 DCIIPWLELHNSCPVCRYELPTDDPDYEQRTRGSSAPNRSQSESQPFGDSSTGGENVVGS 466
           DC++PWLELHNSCPVCR+ELPTDDPDYE+R RG+                ++GG +   S
Sbjct: 249 DCLLPWLELHNSCPVCRHELPTDDPDYERRVRGA--------------QGTSGGNDGDNS 308

Query: 467 DPNSDENSQTQQMGERRVRRIAFPWPFRGFG 526
              SD +++T +    R  RI+ PWPF+  G
Sbjct: 309 GQRSDGDNRTVE----RSFRISLPWPFQARG 321

Query: 527  586
           
Sbjct: 369  321

Query: 587  646
           
Sbjct: 429  321

Query: 647  680
           
Sbjct: 489  321

[Close]

BLAST of CU110541 vs. Swiss-Prot
Match: RNG1L_ARATH (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.3e-13
Identity = 43/99 (43.43%), Postives = 47/99 (47.47%), Query Frame = -2


Query: 398 DCIIPWLELHNSCPVCRYELPTDDPDYEQRTRGSSAPNRSQSESQPFGDSSTGGENVVGS 457
           DC++PWLELHNSCPVCR+ELPTDDPDYE R++GS                        G 
Sbjct: 241 DCLLPWLELHNSCPVCRFELPTDDPDYENRSQGSQGS---------------------GD 300

Query: 458 DPNSDENSQTQQMGERRVRRIAFPWPFR-----GFGSAA 517
              S E  QT +        I  PWPFR     G GS A
Sbjct: 301 GQGSVEGQQTPRFS------IQLPWPFRRQDGSGSGSGA 312

Query: 518  577
           
Sbjct: 361  312

Query: 578  637
           
Sbjct: 421  312

Query: 638  680
           
Sbjct: 481  312

[Close]

BLAST of CU110541 vs. Swiss-Prot
Match: RHC1A_ARATH (Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana GN=RHC1A PE=2 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.3e-08
Identity = 41/129 (31.78%), Postives = 57/129 (44.19%), Query Frame = -2


Query: 296 ADCIIPWLELHNSCPVCRYELPTDDPDYEQRTRGSSAPNRSQSESQPFGDSSTGGENVVG 355
           +DCI+PWL  HNSCPVCR ELP+           +S P+ SQ+ + P         N   
Sbjct: 214 SDCIVPWLVQHNSCPVCRQELPS-----------ASGPSSSQNRTTP-------TRNYRS 273

Query: 356 SDPNSDENSQTQQMGERRVRRIAFPWPFRGFGSAAETXXXXXXXXXXXXDEPSSRNRGSQ 415
           S  +S  NS  ++ G  R    +  WPFR  GS++                 S++NRG  
Sbjct: 274 SSSSSSSNS--RENGNERRNPFSSFWPFRSSGSSSS----------------STQNRGGT 306

Query: 416 GSSEPMQED 475
            +S+   E+
Sbjct: 334 RNSDTSDEN 306

Query: 476  535
           
Sbjct: 394  306

Query: 536  595
           
Sbjct: 454  306

Query: 596  655
           
Sbjct: 514  306

Query: 656  683
           
Sbjct: 574  306

[Close]

BLAST of CU110541 vs. Swiss-Prot
Match: RN181_HUMAN (E3 ubiquitin-protein ligase RNF181 OS=Homo sapiens GN=RNF181 PE=1 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 4.1e-07
Identity = 22/42 (52.38%), Postives = 26/42 (61.90%), Query Frame = -2


Query: 557 ADCIIPWLELHNSCPVCRYELPTDDPDYEQRTRGSSAPNRSQ 616
           + CI+PWL   NSCP+CRYELPTDD  YE+  R  +   + Q
Sbjct: 100 SSCILPWLSKTNSCPLCRYELPTDDDTYEEHRRDKARKQQQQ 141

Query: 617  676
           
Sbjct: 160  141

Query: 677  683
           
Sbjct: 220  141

[Close]

BLAST of CU110541 vs. Swiss-Prot
Match: RN181_XENLA (E3 ubiquitin-protein ligase RNF181 OS=Xenopus laevis GN=rnf181 PE=2 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 2.6e-06
Identity = 20/28 (71.43%), Postives = 22/28 (78.57%), Query Frame = -2


Query: 593 CIIPWLELHNSCPVCRYELPTDDPDYEQ 652
           CI+PWL   NSCP+CR+ELPTD PDYE+
Sbjct: 105 CILPWLGKTNSCPLCRHELPTDSPDYEE 132

Query: 653  677
           
Sbjct: 165  132

[Close]

BLAST of CU110541 vs. TrEMBL
Match: A0A0A0LTV3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G043100 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 8.1e-63
Identity = 119/131 (90.84%), Postives = 119/131 (90.84%), Query Frame = -2


Query: 290 ADCIIPWLELHNSCPVCRYELPTDDPDYEQRTRGSSAPNRSQSESQPFGDSSTGGENVVG 349
           ADCIIPWLELHNSCPVCRYELPTDDPDYEQRTRGSSAPNRSQSESQPFGDSSTGGENVVG
Sbjct: 248 ADCIIPWLELHNSCPVCRYELPTDDPDYEQRTRGSSAPNRSQSESQPFGDSSTGGENVVG 307

Query: 350 SDPNSDENSQTQQMGERRVRRIAFPWPFRGFGSAAETXXXXXXXXXXXXDEPSSRNRGSQ 409
           SDPNSDENSQTQQMGERRVRRIAFPWPFRGFGSAAET            DEPSSRNRGSQ
Sbjct: 308 SDPNSDENSQTQQMGERRVRRIAFPWPFRGFGSAAETSNSGGGNNSGNNDEPSSRNRGSQ 367

Query: 410 GSSEPMQEDLD 469
           GSSEPMQEDLD
Sbjct: 368 GSSEPMQEDLD 378

Query: 470  529
           
Sbjct: 428  378

Query: 530  589
           
Sbjct: 488  378

Query: 590  649
           
Sbjct: 548  378

Query: 650  683
           
Sbjct: 608  378

[Close]

BLAST of CU110541 vs. TrEMBL
Match: W9T1E8_9ROSA (E3 ubiquitin-protein ligase RING1 OS=Morus notabilis GN=L484_000879 PE=4 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 2.3e-25
Identity = 71/137 (51.82%), Postives = 82/137 (59.85%), Query Frame = -2


Query: 290 ADCIIPWLELHNSCPVCRYELPTDDPDYEQRTRGSSAPNRSQSESQPFGDSSTGGE-NVV 349
           ++CI+PWLELHNSCPVCRYELPTDDPDYEQR RG+S P      +  F  S  GG  N V
Sbjct: 243 SECILPWLELHNSCPVCRYELPTDDPDYEQRNRGTSTPANQSQAAGGFNISVGGGSINAV 302

Query: 350 ----GSDPNSDENSQTQQMGERRVRRIAFPWPFRGFGSAAETXXXXXXXXXXXXDEPSSR 409
               GS   S EN QT +M ERR   I+ P  FR FGS AET            +  +S 
Sbjct: 303 GDGSGSGATSGENPQTPRMVERRF-TISLPQLFRVFGSTAETSNTGSGNNNGNNEGSNSE 362

Query: 410 NRGSQGS-SEPMQEDLD 469
           NRG+Q + SEP  EDLD
Sbjct: 363 NRGNQSTGSEPRHEDLD 378

Query: 470  529
           
Sbjct: 423  378

Query: 530  589
           
Sbjct: 483  378

Query: 590  649
           
Sbjct: 543  378

Query: 650  683
           
Sbjct: 603  378

[Close]

BLAST of CU110541 vs. TrEMBL
Match: A0A067E4G7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g0186891mg PE=4 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 5.7e-24
Identity = 66/136 (48.53%), Postives = 79/136 (58.09%), Query Frame = -2


Query: 290 DCIIPWLELHNSCPVCRYELPTDDPDYEQRTRGSSAPNRSQSESQPFGDS-----STGGE 349
           DCI+PWLELHNSCPVCRYELPTDDPDYEQR  G+   N + + +     S       GG 
Sbjct: 222 DCIMPWLELHNSCPVCRYELPTDDPDYEQRRNGNGNGNNNSNNNNSMNQSFNLGFGFGGG 281

Query: 350 NVVGSDPNSDENSQTQQMGERRVRRIAFPWPFRGFGSAAETXXXXXXXXXXXXD-EPSSR 409
              G+D  S  N++T +  ERR+ RI+ PWPF  F S AET            D + +S 
Sbjct: 282 GSGGNDGESGGNAETPRTVERRL-RISLPWPFNAFASRAETSGNSGSGSGGTNDGDSTSG 341

Query: 410 NRGSQGSSEPMQEDLD 469
           NRG    SEP QEDLD
Sbjct: 342 NRG----SEPRQEDLD 352

Query: 470  529
           
Sbjct: 402  352

Query: 530  589
           
Sbjct: 462  352

Query: 590  649
           
Sbjct: 522  352

Query: 650  680
           
Sbjct: 582  352

[Close]

BLAST of CU110541 vs. TrEMBL
Match: V4TXR0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020902mg PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 2.8e-23
Identity = 67/133 (50.38%), Postives = 81/133 (60.90%), Query Frame = -2


Query: 290 DCIIPWLELHNSCPVCRYELPTDDPDYEQRTRGS--SAPNRSQSESQPFG-DSSTGGENV 349
           DCI+PWLELHNSCPVCRYELPTDDPDYEQR  G+  +  N + S +Q F      GG   
Sbjct: 222 DCIMPWLELHNSCPVCRYELPTDDPDYEQRRNGNGDNNSNNNNSMNQSFNLGFGFGGGGS 281

Query: 350 VGSDPNSDENSQTQQMGERRVRRIAFPWPFRGFGSAAETXXXXXXXXXXXXDEPSSRNRG 409
            G+D  S  N++T +  ERR+ RI+ PWPF  F S AET            D  S+   G
Sbjct: 282 GGNDGESGGNAETPRTVERRL-RISLPWPFNAFASRAETSGNSGSGSGGTNDGDST--SG 341

Query: 410 SQGSSEPMQEDLD 469
           ++G SEP QEDLD
Sbjct: 342 TRG-SEPRQEDLD 350

Query: 470  529
           
Sbjct: 402  350

Query: 530  589
           
Sbjct: 462  350

Query: 590  649
           
Sbjct: 522  350

Query: 650  680
           
Sbjct: 582  350

[Close]

BLAST of CU110541 vs. TrEMBL
Match: A0A068TRB9_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00022708001 PE=4 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 1.1e-22
Identity = 66/144 (45.83%), Postives = 77/144 (53.47%), Query Frame = -2


Query: 290 ADCIIPWLELHNSCPVCRYELPTDDPDYEQRTRGSSAPNRSQSESQPFG-------DSST 349
           +DCI+PWLELHNSCPVCRYELPTDDPDYE R  G    N S S  + FG       +  T
Sbjct: 250 SDCILPWLELHNSCPVCRYELPTDDPDYESRRNGQQGGNNSTSNVRSFGINIRTDDNLGT 309

Query: 350 GGENVVGSDPNSDENSQTQQMGERRVRRIAFPWPFRGFGSAAETXXXXXXXXXXXXDEPS 409
           G   + G   N  EN QT +  ERR  RI+ PW FRGFGS AET            +  S
Sbjct: 310 GSGGLSGGAVN-QENPQTPRTVERRF-RISLPWLFRGFGSPAETSGSGGAANSDGGNNGS 369

Query: 410 SRNRGSQGSS------EPMQEDLD 469
            +N  + G S      +   EDLD
Sbjct: 370 RQNNNNSGGSNTDSGGQARMEDLD 391

Query: 470  529
           
Sbjct: 430  391

Query: 530  589
           
Sbjct: 490  391

Query: 590  649
           
Sbjct: 550  391

Query: 650  683
           
Sbjct: 610  391

[Close]

BLAST of CU110541 vs. NCBI nr
Match: gi|449439501|ref|XP_004137524.1| (PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus])

HSP 1 Score: 242.7 bits (618), Expect = 6.4e-61
Identity = 119/131 (90.84%), Postives = 119/131 (90.84%), Query Frame = -2


Query: 290 ADCIIPWLELHNSCPVCRYELPTDDPDYEQRTRGSSAPNRSQSESQPFGDSSTGGENVVG 349
           ADCIIPWLELHNSCPVCRYELPTDDPDYEQRTRGSSAPNRSQSESQPFGDSSTGGENVVG
Sbjct: 248 ADCIIPWLELHNSCPVCRYELPTDDPDYEQRTRGSSAPNRSQSESQPFGDSSTGGENVVG 307

Query: 350 SDPNSDENSQTQQMGERRVRRIAFPWPFRGFGSAAETXXXXXXXXXXXXDEPSSRNRGSQ 409
           SDPNSDENSQTQQMGERRVRRIAFPWPFRGFGSAAET            DEPSSRNRGSQ
Sbjct: 308 SDPNSDENSQTQQMGERRVRRIAFPWPFRGFGSAAETSNSGGGNNSGNNDEPSSRNRGSQ 367

Query: 410 GSSEPMQEDLD 469
           GSSEPMQEDLD
Sbjct: 368 GSSEPMQEDLD 378

Query: 470  529
           
Sbjct: 428  378

Query: 530  589
           
Sbjct: 488  378

Query: 590  649
           
Sbjct: 548  378

Query: 650  683
           
Sbjct: 608  378

[Close]

BLAST of CU110541 vs. NCBI nr
Match: gi|659066950|ref|XP_008467256.1| (PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis melo])

HSP 1 Score: 238.0 bits (606), Expect = 1.6e-59
Identity = 117/131 (89.31%), Postives = 117/131 (89.31%), Query Frame = -2


Query: 290 ADCIIPWLELHNSCPVCRYELPTDDPDYEQRTRGSSAPNRSQSESQPFGDSSTGGENVVG 349
           ADCIIPWLELHNSCPVCRYELPTDDPDYEQRTR SSAPNRSQSESQPFGDSSTGGENVVG
Sbjct: 247 ADCIIPWLELHNSCPVCRYELPTDDPDYEQRTRASSAPNRSQSESQPFGDSSTGGENVVG 306

Query: 350 SDPNSDENSQTQQMGERRVRRIAFPWPFRGFGSAAETXXXXXXXXXXXXDEPSSRNRGSQ 409
           SDPNSDENSQTQQMGERRVRRIAFPWPFRGFGSAAET            DEPSSRNRGSQ
Sbjct: 307 SDPNSDENSQTQQMGERRVRRIAFPWPFRGFGSAAETSNSGGGNNSGNNDEPSSRNRGSQ 366

Query: 410 GSSEPMQEDLD 469
            SSEPMQEDLD
Sbjct: 367 SSSEPMQEDLD 377

Query: 470  529
           
Sbjct: 427  377

Query: 530  589
           
Sbjct: 487  377

Query: 590  649
           
Sbjct: 547  377

Query: 650  683
           
Sbjct: 607  377

[Close]

BLAST of CU110541 vs. NCBI nr
Match: gi|703069031|ref|XP_010088395.1| (E3 ubiquitin-protein ligase RING1 [Morus notabilis])

HSP 1 Score: 118.2 bits (295), Expect = 1.8e-23
Identity = 71/137 (51.82%), Postives = 82/137 (59.85%), Query Frame = -2


Query: 290 ADCIIPWLELHNSCPVCRYELPTDDPDYEQRTRGSSAPNRSQSESQPFGDSSTGGE-NVV 349
           ++CI+PWLELHNSCPVCRYELPTDDPDYEQR RG+S P      +  F  S  GG  N V
Sbjct: 243 SECILPWLELHNSCPVCRYELPTDDPDYEQRNRGTSTPANQSQAAGGFNISVGGGSINAV 302

Query: 350 ----GSDPNSDENSQTQQMGERRVRRIAFPWPFRGFGSAAETXXXXXXXXXXXXDEPSSR 409
               GS   S EN QT +M ERR   I+ P  FR FGS AET            +  +S 
Sbjct: 303 GDGSGSGATSGENPQTPRMVERRF-TISLPQLFRVFGSTAETSNTGSGNNNGNNEGSNSE 362

Query: 410 NRGSQGS-SEPMQEDLD 469
           NRG+Q + SEP  EDLD
Sbjct: 363 NRGNQSTGSEPRHEDLD 378

Query: 470  529
           
Sbjct: 423  378

Query: 530  589
           
Sbjct: 483  378

Query: 590  649
           
Sbjct: 543  378

Query: 650  683
           
Sbjct: 603  378

[Close]

BLAST of CU110541 vs. NCBI nr
Match: gi|641829626|gb|KDO48740.1| (hypothetical protein CISIN_1g0186891mg [Citrus sinensis])

HSP 1 Score: 113.2 bits (282), Expect = 5.9e-22
Identity = 66/136 (48.53%), Postives = 79/136 (58.09%), Query Frame = -2


Query: 290 DCIIPWLELHNSCPVCRYELPTDDPDYEQRTRGSSAPNRSQSESQPFGDS-----STGGE 349
           DCI+PWLELHNSCPVCRYELPTDDPDYEQR  G+   N + + +     S       GG 
Sbjct: 222 DCIMPWLELHNSCPVCRYELPTDDPDYEQRRNGNGNGNNNSNNNNSMNQSFNLGFGFGGG 281

Query: 350 NVVGSDPNSDENSQTQQMGERRVRRIAFPWPFRGFGSAAETXXXXXXXXXXXXD-EPSSR 409
              G+D  S  N++T +  ERR+ RI+ PWPF  F S AET            D + +S 
Sbjct: 282 GSGGNDGESGGNAETPRTVERRL-RISLPWPFNAFASRAETSGNSGSGSGGTNDGDSTSG 341

Query: 410 NRGSQGSSEPMQEDLD 469
           NRG    SEP QEDLD
Sbjct: 342 NRG----SEPRQEDLD 352

Query: 470  529
           
Sbjct: 402  352

Query: 530  589
           
Sbjct: 462  352

Query: 590  649
           
Sbjct: 522  352

Query: 650  680
           
Sbjct: 582  352

[Close]

BLAST of CU110541 vs. NCBI nr
Match: gi|568881069|ref|XP_006493415.1| (PREDICTED: E3 ubiquitin-protein ligase RING1 [Citrus sinensis])

HSP 1 Score: 113.2 bits (282), Expect = 5.9e-22
Identity = 66/136 (48.53%), Postives = 79/136 (58.09%), Query Frame = -2


Query: 290 DCIIPWLELHNSCPVCRYELPTDDPDYEQRTRGSSAPNRSQSESQPFGDS-----STGGE 349
           DCI+PWLELHNSCPVCRYELPTDDPDYEQR  G+   N + + +     S       GG 
Sbjct: 222 DCIMPWLELHNSCPVCRYELPTDDPDYEQRRNGNGNGNNNSNNNNSMNQSFNLGFGFGGG 281

Query: 350 NVVGSDPNSDENSQTQQMGERRVRRIAFPWPFRGFGSAAETXXXXXXXXXXXXD-EPSSR 409
              G+D  S  N++T +  ERR+ RI+ PWPF  F S AET            D + +S 
Sbjct: 282 GSGGNDGESGGNAETPRTVERRL-RISLPWPFNAFASRAETSGNSGSGSGGTNDGDSTSG 341

Query: 410 NRGSQGSSEPMQEDLD 469
           NRG    SEP QEDLD
Sbjct: 342 NRG----SEPRQEDLD 352

Query: 470  529
           
Sbjct: 402  352

Query: 530  589
           
Sbjct: 462  352

Query: 590  649
           
Sbjct: 522  352

Query: 650  680
           
Sbjct: 582  352

The following BLAST results are available for this feature:

BLAST of CU110541 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RING1_GOSHI	4.8e-16	46.15	E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum GN=RING1 PE=1 SV=1	[more]
RNG1L_ARATH	1.3e-13	43.43	E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana GN=At3g19950 PE=1...	[more]
RHC1A_ARATH	1.3e-08	31.78	Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana GN=RHC1A PE=2...	[more]
RN181_HUMAN	4.1e-07	52.38	E3 ubiquitin-protein ligase RNF181 OS=Homo sapiens GN=RNF181 PE=1 SV=1	[more]
RN181_XENLA	2.6e-06	71.43	E3 ubiquitin-protein ligase RNF181 OS=Xenopus laevis GN=rnf181 PE=2 SV=1	[more]

BLAST of CU110541 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LTV3_CUCSA	8.1e-63	90.84	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G043100 PE=4 SV=1	[more]
W9T1E8_9ROSA	2.3e-25	51.82	E3 ubiquitin-protein ligase RING1 OS=Morus notabilis GN=L484_000879 PE=4 SV=1	[more]
A0A067E4G7_CITSI	5.7e-24	48.53	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g0186891mg PE=4 SV=1	[more]
V4TXR0_9ROSI	2.8e-23	50.38	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020902mg PE=4 SV=1	[more]
A0A068TRB9_COFCA	1.1e-22	45.83	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00022708001 PE=4 SV=1	[more]

BLAST of CU110541 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449439501\|ref\|XP_004137524.1\|	6.4e-61	90.84	PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]	[more]
gi\|659066950\|ref\|XP_008467256.1\|	1.6e-59	89.31	PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis melo]	[more]
gi\|703069031\|ref\|XP_010088395.1\|	1.8e-23	51.82	E3 ubiquitin-protein ligase RING1 [Morus notabilis]	[more]
gi\|641829626\|gb\|KDO48740.1\|	5.9e-22	48.53	hypothetical protein CISIN_1g0186891mg [Citrus sinensis]	[more]
gi\|568881069\|ref\|XP_006493415.1\|	5.9e-22	48.53	PREDICTED: E3 ubiquitin-protein ligase RING1 [Citrus sinensis]	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition
IPR013083	Znf_RING/FYVE/PHD

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
Csa1G043100	Csa1G043100	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
FKNP3UI02MA5VD	FKNP3UI02MA5VD	EST
FKNP3UI02MCAMQ	FKNP3UI02MCAMQ	EST
G0009081	G0009081	EST
G0041096	G0041096	EST
G0046981	G0046981	EST
G0114067	G0114067	EST
G0116218	G0116218	EST
H0049690	H0049690	EST
H0090311	H0090311	EST

InterPro

Analysis Name: InterPro Annotations of cucumber unigene v3
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 3..29 score: 4.
None	No IPR available	PANTHER	PTHR22763	RING ZINC FINGER PROTEIN	coord: 2..131 score: 2.1
None	No IPR available	PANTHER	PTHR22763:SF5	E3 UBIQUITIN-PROTEIN LIGASE CIP8	coord: 2..131 score: 2.1
None	No IPR available	unknown	SSF57850	RING/U-box	coord: 3..26 score: 3.5