CU110142 (transcribed_cluster) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CU110142
Type	transcribed_cluster
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Zinc finger CCCH domain-containing protein 43
Location	Chr1 : 5725758 .. 5728209 (+)
Sequence length	558

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

TGATGTCGATGGGGAGGTTGATGCCGGCGACGGCGACGGCGGTGAGGTGGAAAGGAAAGGGGACTGGAGAGGCAAAAGCAATCAGTACCCAGTACGGCCTGATGCTGAGGATTGTGCCTTTTACCTTAAGACCGGAACTTGCAAGTTCGGGTCATTTTGCAAATTCAATCACCCTGTTCGAAAGAAAAACCAGGTTTGTTTCTGAGAAATTGAAATATGAGGATGATTCAACTGGGACAGCAAACAGAACAGAATGCAAGTTTTACTTGAGGACTGGGGGTTGTAAATTTGGAAATGCCTGTAGATATAACCACACGAGACCAAGAGCGTTAACAAGCCCAATTCTAGAGCTTAACTTCCTTGGTCTGCCAATCCGACCAGATGAAAAAGAATGTCCCTATTACATGCGCACAGGATCCTGCAAATATGGAGCAAACTGCAAGTTTAATCATCCTGATCCTACAACCGTTGCTGGATCTGAATCTCTTTCAGGATATAACAATGGAGTTCCCCCTACAAGGTGCATCCCAATCACAGATCACATCATGGACTTCACCA

Library


Library category	ESTs
fruit (8DPP) library	6
gynoecious flower library	1
hermaphrodite flower library	2

Homology

[Close]

BLAST of CU110142 vs. Swiss-Prot
Match: C3H43_ARATH (Zinc finger CCCH domain-containing protein 43 OS=Arabidopsis thaliana GN=At3g48440 PE=2 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 5.1e-32
Identity = 61/102 (59.80%), Postives = 74/102 (72.55%), Query Frame = 3


Query: 207 KLKYEDDSTGTANRTECKFYLRTGGCKFGNACRYNHTRPRALTSPILELNFLGLPIRPDE 266
           K++ ++D  G     +CK+Y RTGGCK+G  CR+NHT P++  +   ELNFLGLP+RP E
Sbjct: 148 KVREKEDDGGKLGLIDCKYYFRTGGCKYGETCRFNHTIPKSGLASAPELNFLGLPLRPGE 207

Query: 267 KECPYYMRTGSCKYGANCKFNHPDPTTVAGSESLS-GYNNGV 326
            ECPYYMR GSCKYGA CKFNHPDPTT+ G++S S   NNGV
Sbjct: 208 VECPYYMRNGSCKYGAECKFNHPDPTTIGGTDSPSFRGNNGV 249

Query: 327  386
           
Sbjct: 268  249

Query: 387  446
           
Sbjct: 328  249

Query: 447  506
           
Sbjct: 388  249

Query: 507  510
           
Sbjct: 448  249

HSP 2 Score: 79.0 bits (193), Expect = 6.2e-14
Identity = 32/70 (45.71%), Postives = 43/70 (61.43%), Query Frame = 3


Query: 243 NRTECKFYLRTGGCKFGNACRYNHTRPRALTSPILELNFLGLPIRPDEKECPYYMRTGSC 302
           ++ EC +Y++TG CKF   C+Y+H + R    P   LN  GLP+RPD+  C YY R G C
Sbjct: 348 DQPECSYYMKTGDCKFKFNCKYHHPKNRLPKLPPYALNDKGLPLRPDQNICTYYSRYGIC 407

Query: 303 KYGANCKFNH 362
           K+G  C+F+H
Sbjct: 408 KFGPACRFDH 417

Query: 363  422
           
Sbjct: 468  417

Query: 423  453
           
Sbjct: 528  417

HSP 3 Score: 69.3 bits (168), Expect = 4.9e-11
Identity = 27/39 (69.23%), Postives = 32/39 (82.05%), Query Frame = 2


Query: 80  NQYPVRPDAEDCAFYLKTGTCKFGSFCKFNHPVRKKNQV 139
           N YPVRP AEDC+FY++TG+CKFGS CKFNHP+ +K Q+
Sbjct: 105 NVYPVRPGAEDCSFYMRTGSCKFGSSCKFNHPLARKFQI 143

Query: 140  197
           
Sbjct: 165  143

HSP 4 Score: 69.3 bits (168), Expect = 4.9e-11
Identity = 34/78 (43.59%), Postives = 41/78 (52.56%), Query Frame = 3


Query: 252 ECKFYLRTGGCKFGNACRYNHTRPRALTSPILELNFLGLPIRPDEK--------ECPYYM 311
           +C FY+RTG CKFG++C++NH  P A    I   N     +R  E         +C YY 
Sbjct: 115 DCSFYMRTGSCKFGSSCKFNH--PLARKFQIARDN----KVREKEDDGGKLGLIDCKYYF 174

Query: 312 RTGSCKYGANCKFNHPDP 371
           RTG CKYG  C+FNH  P
Sbjct: 175 RTGGCKYGETCRFNHTIP 186

Query: 372  431
           
Sbjct: 235  186

Query: 432  462
           
Sbjct: 295  186

HSP 5 Score: 55.5 bits (132), Expect = 7.4e-07
Identity = 19/29 (65.52%), Postives = 24/29 (82.76%), Query Frame = 3


Query: 369 PIRPDEKECPYYMRTGSCKYGANCKFNHP 428
           P+RP  ++C +YMRTGSCK+G++CKFNHP
Sbjct: 108 PVRPGAEDCSFYMRTGSCKFGSSCKFNHP 136

Query: 429  456
           
Sbjct: 168  136

HSP 6 Score: 50.8 bits (120), Expect = 1.8e-05
Identity = 18/29 (62.07%), Postives = 21/29 (72.41%), Query Frame = 3


Query: 369 PIRPDEKECPYYMRTGSCKYGANCKFNHP 428
           P RPD+ EC YYM+TG CK+  NCK++HP
Sbjct: 344 PERPDQPECSYYMKTGDCKFKFNCKYHHP 372

Query: 429  456
           
Sbjct: 404  372

HSP 7 Score: 46.6 bits (109), Expect = 3.4e-04
Identity = 15/29 (51.72%), Postives = 21/29 (72.41%), Query Frame = 2


Query: 89  PVRPDAEDCAFYLKTGTCKFGSFCKFNHP 148
           P+RP   +C +Y++ G+CK+G+ CKFNHP
Sbjct: 202 PLRPGEVECPYYMRNGSCKYGAECKFNHP 230

Query: 149  176
           
Sbjct: 262  230

HSP 8 Score: 42.0 bits (97), Expect = 8.5e-03
Identity = 15/31 (48.39%), Postives = 19/31 (61.29%), Query Frame = 2


Query: 89  PVRPDAEDCAFYLKTGTCKFGSFCKFNHPVR 148
           P+RPD   C +Y + G CKFG  C+F+H V+
Sbjct: 390 PLRPDQNICTYYSRYGICKFGPACRFDHSVQ 420

Query: 149  182
           
Sbjct: 450  420

[Close]

BLAST of CU110142 vs. Swiss-Prot
Match: C3H67_ARATH (Zinc finger CCCH domain-containing protein 67 OS=Arabidopsis thaliana GN=At5g63260 PE=2 SV=2)

HSP 1 Score: 131.7 bits (330), Expect = 8.1e-30
Identity = 57/109 (52.29%), Postives = 74/109 (67.89%), Query Frame = 3


Query: 183 RKTRFVSEKLKYEDDSTGTANRTECKFYLRTGGCKFGNACRYNHTRPRALTSPILELNFL 242
           RK +   E+++  D+        ECK+Y RTGGCK+G +CR++H +     + + ELNFL
Sbjct: 130 RKLQIGRERVRERDEDVENPKLMECKYYFRTGGCKYGESCRFSHMKEHNSPASVPELNFL 189

Query: 243 GLPIRPDEKECPYYMRTGSCKYGANCKFNHPDPTTVAGSES-LSGYNNG 302
           GLPIRP EKECP+YMR GSCK+G++CKFNHPDPT + G +S L   NNG
Sbjct: 190 GLPIRPGEKECPFYMRNGSCKFGSDCKFNHPDPTAIGGVDSPLYRGNNG 238

Query: 303  362
           
Sbjct: 250  238

Query: 363  422
           
Sbjct: 310  238

Query: 423  482
           
Sbjct: 370  238

Query: 483  507
           
Sbjct: 430  238

HSP 2 Score: 81.3 bits (199), Expect = 1.3e-14
Identity = 34/81 (41.98%), Postives = 46/81 (56.79%), Query Frame = 3


Query: 243 NRTECKFYLRTGGCKFGNACRYNHTRPRALTSPILELNFLGLPIRPDEKECPYYMRTGSC 302
           ++ EC +YL+TG CKF   C+Y+H + R         N  GLP+RPD+  C +Y R G C
Sbjct: 336 DQPECTYYLKTGDCKFKYKCKYHHPKNRLPKQAAFSFNDKGLPLRPDQSMCTHYSRYGIC 395

Query: 303 KYGANCKFNHPDPTTVAGSES 362
           K+G  C+F+H  P T + S S
Sbjct: 396 KFGPACRFDHSIPPTFSPSSS 416

Query: 363  422
           
Sbjct: 456  416

Query: 423  482
           
Sbjct: 516  416

Query: 483  486
           
Sbjct: 576  416

HSP 3 Score: 71.6 bits (174), Expect = 1.0e-11
Identity = 27/37 (72.97%), Postives = 33/37 (89.19%), Query Frame = 2


Query: 86  YPVRPDAEDCAFYLKTGTCKFGSFCKFNHPVRKKNQV 145
           YPVRPD+EDC+FY++TG+CK+GS CKFNHPVR+K Q+
Sbjct: 98  YPVRPDSEDCSFYMRTGSCKYGSSCKFNHPVRRKLQI 134

Query: 146  197
           
Sbjct: 158  134

HSP 4 Score: 68.6 bits (166), Expect = 8.4e-11
Identity = 29/68 (42.65%), Postives = 39/68 (57.35%), Query Frame = 3


Query: 252 ECKFYLRTGGCKFGNACRYNHTRPRALTSPILELNFLGLPI-RPDEKECPYYMRTGSCKY 311
           +C FY+RTG CK+G++C++NH   R L      +      +  P   EC YY RTG CKY
Sbjct: 106 DCSFYMRTGSCKYGSSCKFNHPVRRKLQIGRERVRERDEDVENPKLMECKYYFRTGGCKY 165

Query: 312 GANCKFNH 371
           G +C+F+H
Sbjct: 166 GESCRFSH 173

Query: 372  431
           
Sbjct: 226  173

Query: 432  453
           
Sbjct: 286  173

HSP 5 Score: 60.1 bits (144), Expect = 3.0e-08
Identity = 21/29 (72.41%), Postives = 25/29 (86.21%), Query Frame = 3


Query: 369 PIRPDEKECPYYMRTGSCKYGANCKFNHP 428
           P+RPD ++C +YMRTGSCKYG++CKFNHP
Sbjct: 99  PVRPDSEDCSFYMRTGSCKYGSSCKFNHP 127

Query: 429  456
           
Sbjct: 159  127

HSP 6 Score: 52.0 bits (123), Expect = 8.2e-06
Identity = 18/29 (62.07%), Postives = 22/29 (75.86%), Query Frame = 2


Query: 89  PVRPDAEDCAFYLKTGTCKFGSFCKFNHP 148
           P+RP  ++C FY++ G+CKFGS CKFNHP
Sbjct: 192 PIRPGEKECPFYMRNGSCKFGSDCKFNHP 220

Query: 149  176
           
Sbjct: 252  220

HSP 7 Score: 47.8 bits (112), Expect = 1.5e-04
Identity = 17/31 (54.84%), Postives = 22/31 (70.97%), Query Frame = 2


Query: 83  QYPVRPDAEDCAFYLKTGTCKFGSFCKFNHP 142
           ++P RPD  +C +YLKTG CKF   CK++HP
Sbjct: 330 EFPERPDQPECTYYLKTGDCKFKYKCKYHHP 360

Query: 143  176
           
Sbjct: 390  360

HSP 8 Score: 47.4 bits (111), Expect = 2.0e-04
Identity = 16/29 (55.17%), Postives = 20/29 (68.97%), Query Frame = 3


Query: 369 PIRPDEKECPYYMRTGSCKYGANCKFNHP 428
           P RPD+ EC YY++TG CK+   CK++HP
Sbjct: 332 PERPDQPECTYYLKTGDCKFKYKCKYHHP 360

Query: 429  456
           
Sbjct: 392  360

HSP 9 Score: 39.7 bits (91), Expect = 4.2e-02
Identity = 14/30 (46.67%), Postives = 17/30 (56.67%), Query Frame = 2


Query: 89  PVRPDAEDCAFYLKTGTCKFGSFCKFNHPV 148
           P+RPD   C  Y + G CKFG  C+F+H +
Sbjct: 378 PLRPDQSMCTHYSRYGICKFGPACRFDHSI 407

Query: 149  179
           
Sbjct: 438  407

[Close]

BLAST of CU110142 vs. Swiss-Prot
Match: C3H65_ORYSJ (Zinc finger CCCH domain-containing protein 65 OS=Oryza sativa subsp. japonica GN=Os12g0278800 PE=2 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.2e-25
Identity = 56/114 (49.12%), Postives = 68/114 (59.65%), Query Frame = 3


Query: 180 ERKTRFVSEKLKYEDDSTGTANRTECKFYLRTGGCKFGNACRYNHT--RPRALTSPILEL 239
           E++  F+SE    E          ECK+Y   GGCKFG AC+Y H   +     +  ++L
Sbjct: 228 EKRKEFISEGSSQE----------ECKYYSTPGGCKFGKACKYLHRDGKEGKTDAEKVDL 287

Query: 240 NFLGLPIRPDEKECPYYMRTGSCKYGANCKFNHPDPTTVAGSESLSGYNNGVPP 299
           NFLGLP+RP EKECPYYMRTGSCKY  NCKF+HPDP+ VA  +    + NG  P
Sbjct: 288 NFLGLPLRPGEKECPYYMRTGSCKYATNCKFHHPDPSNVASKDPQLEHENGDAP 331

Query: 300  359
           
Sbjct: 348  331

Query: 360  419
           
Sbjct: 408  331

Query: 420  479
           
Sbjct: 468  331

Query: 480  516
           
Sbjct: 528  331

HSP 2 Score: 75.1 bits (183), Expect = 9.0e-13
Identity = 35/78 (44.87%), Postives = 46/78 (58.97%), Query Frame = 3


Query: 252 ECKFYLRTGGCKFGNACRYNHTRPRALTSPILELNFLGLPIRPDEKECPYYMRTGSCKYG 311
           EC+ ++++G CKF   C+Y+H  PR+   P   L+ LGLPI+PD+  C YY R G CK+G
Sbjct: 438 ECQHFVKSGFCKFRMKCKYHH--PRSPVPPAGALSPLGLPIKPDQPVCTYYGRYGVCKFG 497

Query: 312 ANCKFNHP---DPTTVAG 371
             C +NHP    P   AG
Sbjct: 498 PACAYNHPFNFSPVPAAG 513

Query: 372  431
           
Sbjct: 558  513

Query: 432  477
           
Sbjct: 618  513

HSP 3 Score: 53.9 bits (128), Expect = 2.1e-06
Identity = 20/35 (57.14%), Postives = 24/35 (68.57%), Query Frame = 2


Query: 83  QYPVRPDAEDCAFYLKTGTCKFGSFCKFNHPVRKK 142
           ++P RP   DC +Y+K G+C+FG  CKFNHP RKK
Sbjct: 104 RFPRRPGEPDCTYYVKFGSCRFGMKCKFNHPARKK 138

Query: 143  188
           
Sbjct: 164  138

HSP 4 Score: 49.7 bits (117), Expect = 4.1e-05
Identity = 22/45 (48.89%), Postives = 26/45 (57.78%), Query Frame = 3


Query: 369 PIRPDEKECPYYMRTGSCKYGANCKFNHP---DPTTVAGSESLSG 428
           P RP E +C YY++ GSC++G  CKFNHP     + V GS   SG
Sbjct: 106 PRRPGEPDCTYYVKFGSCRFGMKCKFNHPARKKKSRVKGSNGGSG 150

Query: 429  488
           
Sbjct: 166  150

Query: 489  495
           
Sbjct: 226  150

HSP 5 Score: 45.4 bits (106), Expect = 7.6e-04
Identity = 14/29 (48.28%), Postives = 22/29 (75.86%), Query Frame = 2


Query: 89  PVRPDAEDCAFYLKTGTCKFGSFCKFNHP 148
           P+RP  ++C +Y++TG+CK+ + CKF+HP
Sbjct: 283 PLRPGEKECPYYMRTGSCKYATNCKFHHP 311

Query: 149  176
           
Sbjct: 343  311

HSP 6 Score: 42.0 bits (97), Expect = 8.5e-03
Identity = 15/33 (45.45%), Postives = 21/33 (63.64%), Query Frame = 2


Query: 77  SNQYPVRPDAEDCAFYLKTGTCKFGSFCKFNHP 136
           S +YP RP   +C  ++K+G CKF   CK++HP
Sbjct: 427 SEEYPERPGQPECQHFVKSGFCKFRMKCKYHHP 459

Query: 137  176
           
Sbjct: 487  459

HSP 7 Score: 41.6 bits (96), Expect = 1.1e-02
Identity = 14/29 (48.28%), Postives = 17/29 (58.62%), Query Frame = 2


Query: 89  PVRPDAEDCAFYLKTGTCKFGSFCKFNHP 148
           P++PD   C +Y + G CKFG  C +NHP
Sbjct: 475 PIKPDQPVCTYYGRYGVCKFGPACAYNHP 503

Query: 149  176
           
Sbjct: 535  503

[Close]

BLAST of CU110142 vs. Swiss-Prot
Match: C3H63_ORYSJ (Zinc finger CCCH domain-containing protein 63 OS=Oryza sativa subsp. japonica GN=Os11g0472000 PE=2 SV=2)

HSP 1 Score: 104.8 bits (260), Expect = 1.1e-21
Identity = 46/109 (42.20%), Postives = 68/109 (62.39%), Query Frame = 3


Query: 180 ERKTRFVSEKLKYEDDSTGTANRTECKFYLRTGGCKFGNACRYNHTRPRALTSPILELNF 239
           +RK    + ++K E        + EC++YL+TG CKFG  C+++H R +A  +  ++LN 
Sbjct: 84  DRKMAVAAARMKGEYPQR--IGQPECQYYLKTGTCKFGATCKFHHPREKAAIATRVQLNA 143

Query: 240 LGLPIRPDEKECPYYMRTGSCKYGANCKFNHPDPTTVAGSESLSGYNNG 299
           LG P+RP+EKEC YY+RTG CK+G+ CKF+HP P+    +   S Y+ G
Sbjct: 144 LGYPLRPNEKECAYYLRTGQCKFGSTCKFHHPQPSNTMVAVRGSVYSPG 190

Query: 300  359
           
Sbjct: 204  190

Query: 360  419
           
Sbjct: 264  190

Query: 420  479
           
Sbjct: 324  190

Query: 480  507
           
Sbjct: 384  190

HSP 2 Score: 92.8 bits (229), Expect = 4.2e-18
Identity = 37/78 (47.44%), Postives = 52/78 (66.67%), Query Frame = 3


Query: 243 NRTECKFYLRTGGCKFGNACRYNHTRPRALTSPILELNFLGLPIRPDEKECPYYMRTGSC 302
           ++ EC+FY++TG CKFG  C+++H + R + +P   L+ LGLP+RP E  C +Y R G C
Sbjct: 311 DQPECQFYMKTGDCKFGAVCKFHHPKERIIPTPNCALSSLGLPLRPGEPICTFYSRYGIC 370

Query: 303 KYGANCKFNHPDPTTVAG 362
           K+G NCKF+HP  T + G
Sbjct: 371 KFGPNCKFDHPMGTVMYG 388

Query: 363  422
           
Sbjct: 431  388

Query: 423  477
           
Sbjct: 491  388

HSP 3 Score: 73.2 bits (178), Expect = 3.4e-12
Identity = 29/68 (42.65%), Postives = 41/68 (60.29%), Query Frame = 3


Query: 252 ECKFYLRTGGCKFGNACRYNHTRPRALTSPILELNFLGLPIRPDEKECPYYMRTGSCKYG 311
           +C +Y+RTG C+FG  C++NH   R +      +     P R  + EC YY++TG+CK+G
Sbjct: 61  DCSYYMRTGLCRFGMTCKFNHPADRKMAVAAARMKG-EYPQRIGQPECQYYLKTGTCKFG 120

Query: 312 ANCKFNHP 371
           A CKF+HP
Sbjct: 121 ATCKFHHP 127

Query: 372  431
           
Sbjct: 181  127

Query: 432  456
           
Sbjct: 241  127

HSP 4 Score: 55.8 bits (133), Expect = 5.7e-07
Identity = 20/30 (66.67%), Postives = 25/30 (83.33%), Query Frame = 2


Query: 86  YPVRPDAEDCAFYLKTGTCKFGSFCKFNHP 145
           YP+RP+ ++CA+YL+TG CKFGS CKF+HP
Sbjct: 144 YPLRPNEKECAYYLRTGQCKFGSTCKFHHP 173

Query: 146  176
           
Sbjct: 204  173

HSP 5 Score: 53.1 bits (126), Expect = 3.7e-06
Identity = 19/30 (63.33%), Postives = 22/30 (73.33%), Query Frame = 2


Query: 86  YPVRPDAEDCAFYLKTGTCKFGSFCKFNHP 145
           +P RPD  +C FY+KTG CKFG+ CKF+HP
Sbjct: 306 FPERPDQPECQFYMKTGDCKFGAVCKFHHP 335

Query: 146  176
           
Sbjct: 366  335

HSP 6 Score: 52.4 bits (124), Expect = 6.3e-06
Identity = 19/29 (65.52%), Postives = 22/29 (75.86%), Query Frame = 3


Query: 369 PIRPDEKECPYYMRTGSCKYGANCKFNHP 428
           P RPD+ EC +YM+TG CK+GA CKF+HP
Sbjct: 307 PERPDQPECQFYMKTGDCKFGAVCKFHHP 335

Query: 429  456
           
Sbjct: 367  335

HSP 7 Score: 51.2 bits (121), Expect = 1.4e-05
Identity = 20/34 (58.82%), Postives = 23/34 (67.65%), Query Frame = 2


Query: 83  QYPVRPDAEDCAFYLKTGTCKFGSFCKFNHPVRK 142
           +YP R    +C +YLKTGTCKFG+ CKF+HP  K
Sbjct: 97  EYPQRIGQPECQYYLKTGTCKFGATCKFHHPREK 130

Query: 143  185
           
Sbjct: 157  130

HSP 8 Score: 50.4 bits (119), Expect = 2.4e-05
Identity = 19/41 (46.34%), Postives = 25/41 (60.98%), Query Frame = 2


Query: 74  KSNQYPVRPDAEDCAFYLKTGTCKFGSFCKFNHPVRKKNQV 133
           ++  YP R    DC++Y++TG C+FG  CKFNHP  +K  V
Sbjct: 49  EAGPYPERIGEPDCSYYMRTGLCRFGMTCKFNHPADRKMAV 89

Query: 134  193
           
Sbjct: 109  89

Query: 194  197
           
Sbjct: 169  89

HSP 9 Score: 47.8 bits (112), Expect = 1.5e-04
Identity = 18/29 (62.07%), Postives = 19/29 (65.52%), Query Frame = 3


Query: 369 PIRPDEKECPYYMRTGSCKYGANCKFNHP 428
           P R  E +C YYMRTG C++G  CKFNHP
Sbjct: 54  PERIGEPDCSYYMRTGLCRFGMTCKFNHP 82

Query: 429  456
           
Sbjct: 114  82

HSP 10 Score: 42.4 bits (98), Expect = 6.5e-03
Identity = 16/30 (53.33%), Postives = 18/30 (60.00%), Query Frame = 2


Query: 89  PVRPDAEDCAFYLKTGTCKFGSFCKFNHPV 148
           P+RP    C FY + G CKFG  CKF+HP+
Sbjct: 353 PLRPGEPICTFYSRYGICKFGPNCKFDHPM 382

Query: 149  179
           
Sbjct: 413  382

[Close]

BLAST of CU110142 vs. Swiss-Prot
Match: C3H66_ORYSJ (Zinc finger CCCH domain-containing protein 66 OS=Oryza sativa subsp. japonica GN=Os12g0405100 PE=2 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 5.3e-21
Identity = 42/89 (47.19%), Postives = 59/89 (66.29%), Query Frame = 3


Query: 252 ECKFYLRTGGCKFGNACRYNHTRPRALTSPILELNFLGLPIRPDEKECPYYMRTGSCKYG 311
           EC++YL+TG CKFG  C+++H R +A  +  ++LN LG P+RP+EKEC YY+RTG CK+ 
Sbjct: 116 ECQYYLKTGTCKFGATCKFHHPREKAALANRVQLNVLGYPMRPNEKECAYYLRTGQCKFA 175

Query: 312 ANCKFNHPDPTTVAGSESLSGYNNGVPPT 371
           + CKF+HP P+    +   S Y+ G   T
Sbjct: 176 STCKFHHPQPSNTMVAVRNSMYSPGQSAT 204

Query: 372  431
           
Sbjct: 236  204

Query: 432  491
           
Sbjct: 296  204

Query: 492  519
           
Sbjct: 356  204

HSP 2 Score: 95.9 bits (237), Expect = 4.9e-19
Identity = 39/79 (49.37%), Postives = 53/79 (67.09%), Query Frame = 3


Query: 243 NRTECKFYLRTGGCKFGNACRYNHTRPRALTSPILELNFLGLPIRPDEKECPYYMRTGSC 302
           ++ EC+FY++TG CKFG  C+++H + R + +P   LN LGLP+RP E  C +Y R G C
Sbjct: 320 DQPECQFYMKTGDCKFGAVCKFHHPKERLVPAPNCALNSLGLPLRPGEPVCTFYSRYGIC 379

Query: 303 KYGANCKFNHPDPTTVAGS 362
           K+G NCKF+HP  T + GS
Sbjct: 380 KFGPNCKFDHPMGTLMYGS 398

Query: 363  422
           
Sbjct: 440  398

Query: 423  480
           
Sbjct: 500  398

HSP 3 Score: 76.6 bits (187), Expect = 3.1e-13
Identity = 31/68 (45.59%), Postives = 42/68 (61.76%), Query Frame = 3


Query: 252 ECKFYLRTGGCKFGNACRYNHTRPRALTSPILELNFLGLPIRPDEKECPYYMRTGSCKYG 311
           +C +Y+RTG C+FG  C++NH   R L      +N    P R  + EC YY++TG+CK+G
Sbjct: 71  DCSYYMRTGLCRFGMTCKFNHPPNRKLAVAAARMNG-EYPYRVGQPECQYYLKTGTCKFG 130

Query: 312 ANCKFNHP 371
           A CKF+HP
Sbjct: 131 ATCKFHHP 137

Query: 372  431
           
Sbjct: 191  137

Query: 432  456
           
Sbjct: 251  137

HSP 4 Score: 54.3 bits (129), Expect = 1.6e-06
Identity = 20/32 (62.50%), Postives = 23/32 (71.88%), Query Frame = 2


Query: 80  NQYPVRPDAEDCAFYLKTGTCKFGSFCKFNHP 139
           N +P RPD  +C FY+KTG CKFG+ CKF+HP
Sbjct: 313 NIFPERPDQPECQFYMKTGDCKFGAVCKFHHP 344

Query: 140  176
           
Sbjct: 373  344

HSP 5 Score: 53.5 bits (127), Expect = 2.8e-06
Identity = 19/30 (63.33%), Postives = 24/30 (80.00%), Query Frame = 2


Query: 86  YPVRPDAEDCAFYLKTGTCKFGSFCKFNHP 145
           YP+RP+ ++CA+YL+TG CKF S CKF+HP
Sbjct: 154 YPMRPNEKECAYYLRTGQCKFASTCKFHHP 183

Query: 146  176
           
Sbjct: 214  183

HSP 6 Score: 52.4 bits (124), Expect = 6.3e-06
Identity = 20/36 (55.56%), Postives = 24/36 (66.67%), Query Frame = 2


Query: 77  SNQYPVRPDAEDCAFYLKTGTCKFGSFCKFNHPVRK 136
           + +YP R    +C +YLKTGTCKFG+ CKF+HP  K
Sbjct: 105 NGEYPYRVGQPECQYYLKTGTCKFGATCKFHHPREK 140

Query: 137  185
           
Sbjct: 165  140

HSP 7 Score: 52.4 bits (124), Expect = 6.3e-06
Identity = 19/29 (65.52%), Postives = 22/29 (75.86%), Query Frame = 3


Query: 369 PIRPDEKECPYYMRTGSCKYGANCKFNHP 428
           P RPD+ EC +YM+TG CK+GA CKF+HP
Sbjct: 316 PERPDQPECQFYMKTGDCKFGAVCKFHHP 344

Query: 429  456
           
Sbjct: 376  344

HSP 8 Score: 51.2 bits (121), Expect = 1.4e-05
Identity = 19/38 (50.00%), Postives = 24/38 (63.16%), Query Frame = 2


Query: 74  KSNQYPVRPDAEDCAFYLKTGTCKFGSFCKFNHPVRKK 133
           +S  YP R    DC++Y++TG C+FG  CKFNHP  +K
Sbjct: 59  ESTPYPERIGEPDCSYYMRTGLCRFGMTCKFNHPPNRK 96

Query: 134  188
           
Sbjct: 119  96

HSP 9 Score: 47.8 bits (112), Expect = 1.5e-04
Identity = 18/29 (62.07%), Postives = 19/29 (65.52%), Query Frame = 3


Query: 369 PIRPDEKECPYYMRTGSCKYGANCKFNHP 428
           P R  E +C YYMRTG C++G  CKFNHP
Sbjct: 64  PERIGEPDCSYYMRTGLCRFGMTCKFNHP 92

Query: 429  456
           
Sbjct: 124  92

HSP 10 Score: 42.4 bits (98), Expect = 6.5e-03
Identity = 16/30 (53.33%), Postives = 18/30 (60.00%), Query Frame = 2


Query: 89  PVRPDAEDCAFYLKTGTCKFGSFCKFNHPV 148
           P+RP    C FY + G CKFG  CKF+HP+
Sbjct: 362 PLRPGEPVCTFYSRYGICKFGPNCKFDHPM 391

Query: 149  179
           
Sbjct: 422  391

[Close]

BLAST of CU110142 vs. TrEMBL
Match: A0A0A0LU93_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G050060 PE=4 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 9.9e-59
Identity = 110/131 (83.97%), Postives = 113/131 (86.26%), Query Frame = 3


Query: 120 FTLRPELASSGHFANSITLFERKTRFVSEKLKYEDDSTGTANRTECKFYLRTGGCKFGNA 179
           F L+      G F        +K + VSEKLKYEDDSTGTANRTECKFYLRTGGCKFGNA
Sbjct: 147 FYLKTGTCKFGSFCKFNHPVRKKNQVVSEKLKYEDDSTGTANRTECKFYLRTGGCKFGNA 206

Query: 180 CRYNHTRPRALTSPILELNFLGLPIRPDEKECPYYMRTGSCKYGANCKFNHPDPTTVAGS 239
           CRYNHTRPRALTSPILELNFLGLPIRPDEKECPYYMRTGSCKYGANCKFNHPDPTTVAGS
Sbjct: 207 CRYNHTRPRALTSPILELNFLGLPIRPDEKECPYYMRTGSCKYGANCKFNHPDPTTVAGS 266

Query: 240 ESLSGYNNGVP 299
           ESLSGYNNGVP
Sbjct: 267 ESLSGYNNGVP 277

Query: 300  359
           
Sbjct: 327  277

Query: 360  419
           
Sbjct: 387  277

Query: 420  479
           
Sbjct: 447  277

Query: 480  513
           
Sbjct: 507  277

[Close]

BLAST of CU110142 vs. TrEMBL
Match: A0A0A0LU93_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G050060 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 2.0e-14
Identity = 40/97 (41.24%), Postives = 55/97 (56.70%), Query Frame = 3


Query: 222 DDSTGTANRTECKFYLRTGGCKFGNACRYNHTRPRALTSPILELNFLGLPIRPDEKECPY 281
           D+      + EC ++L+TG CKF + C+Y+H + R    P   LN  GLP+RPD+  C Y
Sbjct: 353 DEYPERPGQPECSYFLKTGDCKFKSLCKYHHPKNRNPKLPTCTLNDKGLPLRPDQNVCTY 412

Query: 282 YMRTGSCKYGANCKFNH---PDPTTVAGSESLSGYNN 341
           Y R G CK+G +CKF+H   P  +TV   E    Y N
Sbjct: 413 YRRYGICKFGPSCKFDHPFLPSSSTVGELEQQPHYGN 449

Query: 342  401
           
Sbjct: 473  449

Query: 402  461
           
Sbjct: 533  449

Query: 462  504
           
Sbjct: 593  449

HSP 2 Score: 53.1 bits (126), Expect = 4.1e-04
Identity = 17/29 (58.62%), Postives = 26/29 (89.66%), Query Frame = 3


Query: 369 PIRPDEKECPYYMRTGSCKYGANCKFNHP 428
           P+RPD ++C +Y++TG+CK+G+ CKFNHP
Sbjct: 137 PVRPDAEDCAFYLKTGTCKFGSFCKFNHP 165

Query: 429  456
           
Sbjct: 197  165

HSP 3 Score: 53.1 bits (126), Expect = 4.1e-04
Identity = 17/29 (58.62%), Postives = 26/29 (89.66%), Query Frame = 2


Query: 89  PVRPDAEDCAFYLKTGTCKFGSFCKFNHP 148
           P+RPD ++C +Y++TG+CK+G+ CKFNHP
Sbjct: 230 PIRPDEKECPYYMRTGSCKYGANCKFNHP 258

Query: 149  176
           
Sbjct: 290  258

HSP 4 Score: 49.3 bits (116), Expect = 5.9e-03
Identity = 17/32 (53.12%), Postives = 25/32 (78.12%), Query Frame = 2


Query: 80  NQYPVRPDAEDCAFYLKTGTCKFGSFCKFNHP 139
           ++YP RP   +C+++LKTG CKF S CK++HP
Sbjct: 353 DEYPERPGQPECSYFLKTGDCKFKSLCKYHHP 384

Query: 140  176
           
Sbjct: 413  384

HSP 5 Score: 44.3 bits (103), Expect = 1.9e-01
Identity = 16/29 (55.17%), Postives = 20/29 (68.97%), Query Frame = 2


Query: 89  PVRPDAEDCAFYLKTGTCKFGSFCKFNHP 148
           P+RPD   C +Y + G CKFG  CKF+HP
Sbjct: 402 PLRPDQNVCTYYRRYGICKFGPSCKFDHP 430

Query: 149  176
           
Sbjct: 462  430

HSP 6 Score: 37.0 bits (84), Expect = 3.0e+01
Identity = 16/16 (100.00%), Postives = 16/16 (100.00%), Query Frame = 1


Query: 511 PLQGASQSQITSWTSP 559
           PLQGASQSQITSWTSP
Sbjct: 277 PLQGASQSQITSWTSP 292

HSP 7 Score: 227.3 bits (578), Expect = 1.6e-56
Identity = 106/131 (80.92%), Postives = 111/131 (84.73%), Query Frame = 3


Query: 120 FTLRPELASSGHFANSITLFERKTRFVSEKLKYEDDSTGTANRTECKFYLRTGGCKFGNA 179
           F L+      G F        +K + VSEKLKY+DDS GTAN+TECKFYLRTGGCKFGNA
Sbjct: 149 FYLKTGTCKFGSFCKFNHPVRKKNQVVSEKLKYDDDSAGTANKTECKFYLRTGGCKFGNA 208

Query: 180 CRYNHTRPRALTSPILELNFLGLPIRPDEKECPYYMRTGSCKYGANCKFNHPDPTTVAGS 239
           CRYNHTR RALTSPILELNFLGLPIRPDEKECPYYMRTGSCKYGANCKFNHPDPTTVAGS
Sbjct: 209 CRYNHTRSRALTSPILELNFLGLPIRPDEKECPYYMRTGSCKYGANCKFNHPDPTTVAGS 268

Query: 240 ESLSGYNNGVP 299
           ESLSGYNNGVP
Sbjct: 269 ESLSGYNNGVP 279

Query: 300  359
           
Sbjct: 329  279

Query: 360  419
           
Sbjct: 389  279

Query: 420  479
           
Sbjct: 449  279

Query: 480  513
           
Sbjct: 509  279

[Close]

BLAST of CU110142 vs. TrEMBL
Match: E5GBX3_CUCME (Nucleic acid binding protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 2.5e-14
Identity = 40/97 (41.24%), Postives = 55/97 (56.70%), Query Frame = 3


Query: 222 DDSTGTANRTECKFYLRTGGCKFGNACRYNHTRPRALTSPILELNFLGLPIRPDEKECPY 281
           D+      + EC ++L+TG CKF + C+Y+H + R    P   LN  GLP+RPD+  C Y
Sbjct: 355 DEYPERPGQPECSYFLKTGDCKFKSLCKYHHPKNRNPKLPTCTLNDKGLPLRPDQNVCTY 414

Query: 282 YMRTGSCKYGANCKFNH---PDPTTVAGSESLSGYNN 341
           Y R G CK+G +CKF+H   P  +TV   E    Y N
Sbjct: 415 YSRYGICKFGPSCKFDHPFLPTSSTVGELEQQPHYGN 451

Query: 342  401
           
Sbjct: 475  451

Query: 402  461
           
Sbjct: 535  451

Query: 462  504
           
Sbjct: 595  451

HSP 2 Score: 53.1 bits (126), Expect = 4.1e-04
Identity = 17/29 (58.62%), Postives = 26/29 (89.66%), Query Frame = 2


Query: 89  PVRPDAEDCAFYLKTGTCKFGSFCKFNHP 148
           P+RPD ++C +Y++TG+CK+G+ CKFNHP
Sbjct: 232 PIRPDEKECPYYMRTGSCKYGANCKFNHP 260

Query: 149  176
           
Sbjct: 292  260

HSP 3 Score: 51.6 bits (122), Expect = 1.2e-03
Identity = 16/29 (55.17%), Postives = 26/29 (89.66%), Query Frame = 3


Query: 369 PIRPDEKECPYYMRTGSCKYGANCKFNHP 428
           P+RP+ ++C +Y++TG+CK+G+ CKFNHP
Sbjct: 139 PVRPEAEDCAFYLKTGTCKFGSFCKFNHP 167

Query: 429  456
           
Sbjct: 199  167

HSP 4 Score: 49.3 bits (116), Expect = 5.9e-03
Identity = 17/32 (53.12%), Postives = 25/32 (78.12%), Query Frame = 2


Query: 80  NQYPVRPDAEDCAFYLKTGTCKFGSFCKFNHP 139
           ++YP RP   +C+++LKTG CKF S CK++HP
Sbjct: 355 DEYPERPGQPECSYFLKTGDCKFKSLCKYHHP 386

Query: 140  176
           
Sbjct: 415  386

HSP 5 Score: 44.3 bits (103), Expect = 1.9e-01
Identity = 16/29 (55.17%), Postives = 20/29 (68.97%), Query Frame = 2


Query: 89  PVRPDAEDCAFYLKTGTCKFGSFCKFNHP 148
           P+RPD   C +Y + G CKFG  CKF+HP
Sbjct: 404 PLRPDQNVCTYYSRYGICKFGPSCKFDHP 432

Query: 149  176
           
Sbjct: 464  432

HSP 6 Score: 37.0 bits (84), Expect = 3.0e+01
Identity = 16/16 (100.00%), Postives = 16/16 (100.00%), Query Frame = 1


Query: 511 PLQGASQSQITSWTSP 559
           PLQGASQSQITSWTSP
Sbjct: 279 PLQGASQSQITSWTSP 294

HSP 7 Score: 174.1 bits (440), Expect = 1.6e-40
Identity = 76/110 (69.09%), Postives = 88/110 (80.00%), Query Frame = 3


Query: 183 RKTRFVSEKLKYEDDSTGTANRTECKFYLRTGGCKFGNACRYNHTRPRALTSPILELNFL 242
           RK + V EK+K +D+ST   ++TECK+YLRTGGCKFG ACRYNH+R +   +PILELNFL
Sbjct: 182 RKNQAVKEKVKEKDESTEKPSQTECKYYLRTGGCKFGKACRYNHSRAKTAVAPILELNFL 241

Query: 243 GLPIRPDEKECPYYMRTGSCKYGANCKFNHPDPTTVAGSESLSGYNNGVP 302
           GLPIRP EKECPYYMR GSCKYGANC+FNHPDPTT    +  SGY NG P
Sbjct: 242 GLPIRPGEKECPYYMRNGSCKYGANCRFNHPDPTTAGACDPPSGYGNGGP 291

Query: 303  362
           
Sbjct: 302  291

Query: 363  422
           
Sbjct: 362  291

Query: 423  482
           
Sbjct: 422  291

Query: 483  513
           
Sbjct: 482  291

[Close]

BLAST of CU110142 vs. TrEMBL
Match: A0A061FXU4_THECC (Zinc finger C-x8-C-x5-C-x3-H type family protein, putative OS=Theobroma cacao GN=TCM_014550 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.5e-11
Identity = 31/41 (75.61%), Postives = 37/41 (90.24%), Query Frame = 2


Query: 71  GKSNQYPVRPDAEDCAFYLKTGTCKFGSFCKFNHPVRKKNQ 130
           G+ + YPVRP+AEDCA+Y+KTG CKFGS CKFNHPVR+KNQ
Sbjct: 145 GRRSHYPVRPEAEDCAYYMKTGLCKFGSNCKFNHPVRRKNQ 185

Query: 131  190
           
Sbjct: 205  185

Query: 191  194
           
Sbjct: 265  185

HSP 2 Score: 76.3 bits (186), Expect = 4.5e-11
Identity = 33/87 (37.93%), Postives = 52/87 (59.77%), Query Frame = 3


Query: 252 ECKFYLRTGGCKFGNACRYNHTRPRALTSPILELNFLGLPIRPDEKECPYYMRTGSCKYG 311
           EC ++++TG CKF + C+Y+H + R        L+  GLP+RPD+  C +Y R G CK+G
Sbjct: 386 ECSYFMKTGDCKFKSNCKYHHPKNRVAKPSPCTLSDKGLPLRPDQSICSHYSRYGICKFG 445

Query: 312 ANCKFNH---PDPTTVAGSESLSGYNN 371
             CKF+H     P+ V+G +    ++N
Sbjct: 446 PACKFDHSVQAAPSVVSGLDQPLPFSN 472

Query: 372  431
           
Sbjct: 506  472

Query: 432  491
           
Sbjct: 566  472

Query: 492  504
           
Sbjct: 626  472

HSP 3 Score: 56.6 bits (135), Expect = 3.7e-05
Identity = 19/29 (65.52%), Postives = 26/29 (89.66%), Query Frame = 3


Query: 369 PIRPDEKECPYYMRTGSCKYGANCKFNHP 428
           P+RP+ ++C YYM+TG CK+G+NCKFNHP
Sbjct: 151 PVRPEAEDCAYYMKTGLCKFGSNCKFNHP 179

Query: 429  456
           
Sbjct: 211  179

HSP 4 Score: 52.0 bits (123), Expect = 9.1e-04
Identity = 20/50 (40.00%), Postives = 30/50 (60.00%), Query Frame = 3


Query: 306 YNHTRPRALTSPILELNFLGLPIRPDEKECPYYMRTGSCKYGANCKFNHP 365
           Y H +P+ L            P+RP + EC Y+M+TG CK+ +NCK++HP
Sbjct: 366 YTHHQPQMLVDEF--------PVRPGQPECSYFMKTGDCKFKSNCKYHHP 407

Query: 366  425
           
Sbjct: 426  407

Query: 426  456
           
Sbjct: 486  407

HSP 5 Score: 47.4 bits (111), Expect = 2.2e-02
Identity = 14/29 (48.28%), Postives = 24/29 (82.76%), Query Frame = 2


Query: 89  PVRPDAEDCAFYLKTGTCKFGSFCKFNHP 148
           P+RP  ++C +Y++ G+CK+G+ C+FNHP
Sbjct: 244 PIRPGEKECPYYMRNGSCKYGANCRFNHP 272

Query: 149  176
           
Sbjct: 304  272

HSP 6 Score: 42.0 bits (97), Expect = 9.4e-01
Identity = 16/31 (51.61%), Postives = 21/31 (67.74%), Query Frame = 2


Query: 89  PVRPDAEDCAFYLKTGTCKFGSFCKFNHPVR 148
           P+RPD   C+ Y + G CKFG  CKF+H V+
Sbjct: 425 PLRPDQSICSHYSRYGICKFGPACKFDHSVQ 455

Query: 149  182
           
Sbjct: 485  455

HSP 7 Score: 167.5 bits (423), Expect = 1.5e-38
Identity = 74/108 (68.52%), Postives = 84/108 (77.78%), Query Frame = 3


Query: 183 RKTRFVSEKLKYEDDSTGTANRTECKFYLRTGGCKFGNACRYNHTRPRALTSPILELNFL 242
           RK + V EKLK  D+ST    +TECK+YLRTGGCKFG ACRYNH+R ++ T PILELNFL
Sbjct: 166 RKNQGVQEKLKENDESTEKPGQTECKYYLRTGGCKFGKACRYNHSRAKSSTDPILELNFL 225

Query: 243 GLPIRPDEKECPYYMRTGSCKYGANCKFNHPDPTTVAGSESLSGYNNG 302
           GLPIR  EKECPYYMR GSCKYGANC+FNHPDPTT    +  + Y NG
Sbjct: 226 GLPIRQGEKECPYYMRNGSCKYGANCRFNHPDPTTTGACDPPAAYGNG 273

Query: 303  362
           
Sbjct: 286  273

Query: 363  422
           
Sbjct: 346  273

Query: 423  482
           
Sbjct: 406  273

Query: 483  507
           
Sbjct: 466  273

[Close]

BLAST of CU110142 vs. TrEMBL
Match: A0A0B0NF00_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_04055 PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 4.5e-11
Identity = 31/43 (72.09%), Postives = 37/43 (86.05%), Query Frame = 2


Query: 65  WRGKSNQYPVRPDAEDCAFYLKTGTCKFGSFCKFNHPVRKKNQ 124
           + G  + YPVRPDAE+CA+Y+KTG CKFGS CKFNHPVR+KNQ
Sbjct: 127 FEGVRSHYPVRPDAENCAYYMKTGLCKFGSNCKFNHPVRRKNQ 169

Query: 125  184
           
Sbjct: 187  169

Query: 185  194
           
Sbjct: 247  169

HSP 2 Score: 74.7 bits (182), Expect = 1.3e-10
Identity = 34/91 (37.36%), Postives = 51/91 (56.04%), Query Frame = 3


Query: 252 ECKFYLRTGGCKFGNACRYNHTRPRALTSPILELNFLGLPIRPDEKECPYYMRTGSCKYG 311
           EC ++L+TG CKF + C+Y+H + R        L+  GLP+RPD+  C +Y R G CK+G
Sbjct: 374 ECSYFLKTGDCKFKSNCKYHHPKNRFAKPAPCALSDKGLPLRPDQSICSHYSRYGICKFG 433

Query: 312 ANCKFNH----PDPTTVAGSESLSGYNNGVP 371
             CKF+H       T V+  E    +++  P
Sbjct: 434 PACKFDHSMQAAPSTAVSELEQPPSFSHSAP 464

Query: 372  431
           
Sbjct: 494  464

Query: 432  491
           
Sbjct: 554  464

Query: 492  513
           
Sbjct: 614  464

HSP 3 Score: 57.4 bits (137), Expect = 2.2e-05
Identity = 20/29 (68.97%), Postives = 25/29 (86.21%), Query Frame = 3


Query: 369 PIRPDEKECPYYMRTGSCKYGANCKFNHP 428
           P+RPD + C YYM+TG CK+G+NCKFNHP
Sbjct: 135 PVRPDAENCAYYMKTGLCKFGSNCKFNHP 163

Query: 429  456
           
Sbjct: 195  163

HSP 4 Score: 48.9 bits (115), Expect = 7.7e-03
Identity = 17/32 (53.12%), Postives = 26/32 (81.25%), Query Frame = 2


Query: 80  NQYPVRPDAEDCAFYLKTGTCKFGSFCKFNHP 139
           +++PVRP   +C+++LKTG CKF S CK++HP
Sbjct: 364 DEFPVRPGQPECSYFLKTGDCKFKSNCKYHHP 395

Query: 140  176
           
Sbjct: 424  395

HSP 5 Score: 44.3 bits (103), Expect = 1.9e-01
Identity = 13/29 (44.83%), Postives = 23/29 (79.31%), Query Frame = 2


Query: 89  PVRPDAEDCAFYLKTGTCKFGSFCKFNHP 148
           P+R   ++C +Y++ G+CK+G+ C+FNHP
Sbjct: 228 PIRQGEKECPYYMRNGSCKYGANCRFNHP 256

Query: 149  176
           
Sbjct: 288  256

HSP 6 Score: 42.0 bits (97), Expect = 9.4e-01
Identity = 17/42 (40.48%), Postives = 24/42 (57.14%), Query Frame = 2


Query: 89  PVRPDAEDCAFYLKTGTCKFGSFCKFNHPVRKKNQVCF*EIE 148
           P+RPD   C+ Y + G CKFG  CKF+H ++        E+E
Sbjct: 413 PLRPDQSICSHYSRYGICKFGPACKFDHSMQAAPSTAVSELE 454

Query: 149  208
           
Sbjct: 473  454

Query: 209  215
           
Sbjct: 533  454

HSP 7 Score: 166.0 bits (419), Expect = 4.3e-38
Identity = 73/108 (67.59%), Postives = 85/108 (78.70%), Query Frame = 3


Query: 183 RKTRFVSEKLKYEDDSTGTANRTECKFYLRTGGCKFGNACRYNHTRPRALTSPILELNFL 242
           R T+ V EK+K E +ST   ++TECK+YLRTGGCKFGNACR+NH+  ++ TSPILE NFL
Sbjct: 141 RTTQAVKEKVKEEVESTEKPSQTECKYYLRTGGCKFGNACRFNHSTAKSSTSPILEFNFL 200

Query: 243 GLPIRPDEKECPYYMRTGSCKYGANCKFNHPDPTTVAGSESLSGYNNG 302
           GLPIR  EKECPYYMR GSCKYGANC+FNHPDPT     +  SGY NG
Sbjct: 201 GLPIRQGEKECPYYMRNGSCKYGANCRFNHPDPTAAGACDPTSGYGNG 248

Query: 303  362
           
Sbjct: 261  248

Query: 363  422
           
Sbjct: 321  248

Query: 423  482
           
Sbjct: 381  248

Query: 483  507
           
Sbjct: 441  248

[Close]

BLAST of CU110142 vs. NCBI nr
Match: gi|449469596|ref|XP_004152505.1| (PREDICTED: zinc finger CCCH domain-containing protein 43 isoform X2 [Cucumis sativus])

HSP 1 Score: 236.9 bits (603), Expect = 2.9e-59
Identity = 110/131 (83.97%), Postives = 113/131 (86.26%), Query Frame = 3


Query: 120 FTLRPELASSGHFANSITLFERKTRFVSEKLKYEDDSTGTANRTECKFYLRTGGCKFGNA 179
           F L+      G F        +K + VSEKLKYEDDSTGTANRTECKFYLRTGGCKFGNA
Sbjct: 147 FYLKTGTCKFGSFCKFNHPVRKKNQVVSEKLKYEDDSTGTANRTECKFYLRTGGCKFGNA 206

Query: 180 CRYNHTRPRALTSPILELNFLGLPIRPDEKECPYYMRTGSCKYGANCKFNHPDPTTVAGS 239
           CRYNHTRPRALTSPILELNFLGLPIRPDEKECPYYMRTGSCKYGANCKFNHPDPTTVAGS
Sbjct: 207 CRYNHTRPRALTSPILELNFLGLPIRPDEKECPYYMRTGSCKYGANCKFNHPDPTTVAGS 266

Query: 240 ESLSGYNNGVP 299
           ESLSGYNNGVP
Sbjct: 267 ESLSGYNNGVP 277

Query: 300  359
           
Sbjct: 327  277

Query: 360  419
           
Sbjct: 387  277

Query: 420  479
           
Sbjct: 447  277

Query: 480  513
           
Sbjct: 507  277

[Close]

BLAST of CU110142 vs. NCBI nr
Match: gi|778657993|ref|XP_011651926.1| (PREDICTED: zinc finger CCCH domain-containing protein 43 isoform X1 [Cucumis sativus])

HSP 1 Score: 231.1 bits (588), Expect = 1.6e-57
Identity = 110/135 (81.48%), Postives = 113/135 (83.70%), Query Frame = 3


Query: 120 FTLRPELASSGHFANSITLFERKTRFVSEKLKYEDDSTGTANRTECK----FYLRTGGCK 179
           F L+      G F        +K + VSEKLKYEDDSTGTANRTECK    FYLRTGGCK
Sbjct: 147 FYLKTGTCKFGSFCKFNHPVRKKNQVVSEKLKYEDDSTGTANRTECKVSIVFYLRTGGCK 206

Query: 180 FGNACRYNHTRPRALTSPILELNFLGLPIRPDEKECPYYMRTGSCKYGANCKFNHPDPTT 239
           FGNACRYNHTRPRALTSPILELNFLGLPIRPDEKECPYYMRTGSCKYGANCKFNHPDPTT
Sbjct: 207 FGNACRYNHTRPRALTSPILELNFLGLPIRPDEKECPYYMRTGSCKYGANCKFNHPDPTT 266

Query: 240 VAGSESLSGYNNGVP 299
           VAGSESLSGYNNGVP
Sbjct: 267 VAGSESLSGYNNGVP 281

Query: 300  359
           
Sbjct: 327  281

Query: 360  419
           
Sbjct: 387  281

Query: 420  479
           
Sbjct: 447  281

Query: 480  513
           
Sbjct: 507  281

[Close]

BLAST of CU110142 vs. NCBI nr
Match: gi|659067397|ref|XP_008439243.1| (PREDICTED: zinc finger CCCH domain-containing protein 43 [Cucumis melo])

HSP 1 Score: 229.6 bits (584), Expect = 4.6e-57
Identity = 106/131 (80.92%), Postives = 111/131 (84.73%), Query Frame = 3


Query: 120 FTLRPELASSGHFANSITLFERKTRFVSEKLKYEDDSTGTANRTECKFYLRTGGCKFGNA 179
           F L+      G F        +K + VSEKLKY+DDS GTAN+TECKFYLRTGGCKFGNA
Sbjct: 149 FYLKTGTCKFGSFCKFNHPVRKKNQVVSEKLKYDDDSAGTANKTECKFYLRTGGCKFGNA 208

Query: 180 CRYNHTRPRALTSPILELNFLGLPIRPDEKECPYYMRTGSCKYGANCKFNHPDPTTVAGS 239
           CRYNHTR RALTSPILELNFLGLPIRPDEKECPYYMRTGSCKYGANCKFNHPDPTTVAGS
Sbjct: 209 CRYNHTRSRALTSPILELNFLGLPIRPDEKECPYYMRTGSCKYGANCKFNHPDPTTVAGS 268

Query: 240 ESLSGYNNGVP 299
           ESLSGYNNGVP
Sbjct: 269 ESLSGYNNGVP 279

Query: 300  359
           
Sbjct: 329  279

Query: 360  419
           
Sbjct: 389  279

Query: 420  479
           
Sbjct: 449  279

Query: 480  513
           
Sbjct: 509  279

[Close]

BLAST of CU110142 vs. NCBI nr
Match: gi|778657996|ref|XP_011651936.1| (PREDICTED: zinc finger CCCH domain-containing protein 43 isoform X3 [Cucumis sativus])

HSP 1 Score: 191.0 bits (484), Expect = 1.8e-45
Identity = 85/89 (95.51%), Postives = 87/89 (97.75%), Query Frame = 3


Query: 246 RTECKFYLRTGGCKFGNACRYNHTRPRALTSPILELNFLGLPIRPDEKECPYYMRTGSCK 305
           R + +FYLRTGGCKFGNACRYNHTRPRALTSPILELNFLGLPIRPDEKECPYYMRTGSCK
Sbjct: 167 RKKNQFYLRTGGCKFGNACRYNHTRPRALTSPILELNFLGLPIRPDEKECPYYMRTGSCK 226

Query: 306 YGANCKFNHPDPTTVAGSESLSGYNNGVP 365
           YGANCKFNHPDPTTVAGSESLSGYNNGVP
Sbjct: 227 YGANCKFNHPDPTTVAGSESLSGYNNGVP 255

Query: 366  425
           
Sbjct: 287  255

Query: 426  485
           
Sbjct: 347  255

Query: 486  513
           
Sbjct: 407  255

[Close]

BLAST of CU110142 vs. NCBI nr
Match: gi|590669733|ref|XP_007037859.1| (Zinc finger C-x8-C-x5-C-x3-H type family protein, putative [Theobroma cacao])

HSP 1 Score: 175.6 bits (444), Expect = 7.8e-41
Identity = 76/110 (69.09%), Postives = 88/110 (80.00%), Query Frame = 3


Query: 183 RKTRFVSEKLKYEDDSTGTANRTECKFYLRTGGCKFGNACRYNHTRPRALTSPILELNFL 242
           RK + V EK+K +D+ST   ++TECK+YLRTGGCKFG ACRYNH+R +   +PILELNFL
Sbjct: 182 RKNQAVKEKVKEKDESTEKPSQTECKYYLRTGGCKFGKACRYNHSRAKTAVAPILELNFL 241

Query: 243 GLPIRPDEKECPYYMRTGSCKYGANCKFNHPDPTTVAGSESLSGYNNGVP 302
           GLPIRP EKECPYYMR GSCKYGANC+FNHPDPTT    +  SGY NG P
Sbjct: 242 GLPIRPGEKECPYYMRNGSCKYGANCRFNHPDPTTAGACDPPSGYGNGGP 291

Query: 303  362
           
Sbjct: 302  291

Query: 363  422
           
Sbjct: 362  291

Query: 423  482
           
Sbjct: 422  291

Query: 483  513
           
Sbjct: 482  291

The following BLAST results are available for this feature:

BLAST of CU110142 vs. Swiss-Prot


Match Name	E-value	Identity	Description
C3H43_ARATH	5.1e-32	59.80	Zinc finger CCCH domain-containing protein 43 OS=Arabidopsis thaliana GN=At3g484...	[more]
C3H67_ARATH	8.1e-30	52.29	Zinc finger CCCH domain-containing protein 67 OS=Arabidopsis thaliana GN=At5g632...	[more]
C3H65_ORYSJ	1.2e-25	49.12	Zinc finger CCCH domain-containing protein 65 OS=Oryza sativa subsp. japonica GN...	[more]
C3H63_ORYSJ	1.1e-21	42.20	Zinc finger CCCH domain-containing protein 63 OS=Oryza sativa subsp. japonica GN...	[more]
C3H66_ORYSJ	5.3e-21	47.19	Zinc finger CCCH domain-containing protein 66 OS=Oryza sativa subsp. japonica GN...	[more]

BLAST of CU110142 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LU93_CUCSA	9.9e-59	83.97	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G050060 PE=4 SV=1	[more]
A0A0A0LU93_CUCSA	2.0e-14	41.24	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G050060 PE=4 SV=1	[more]
E5GBX3_CUCME	2.5e-14	41.24	Nucleic acid binding protein OS=Cucumis melo subsp. melo PE=4 SV=1	[more]
A0A061FXU4_THECC	1.5e-11	75.61	Zinc finger C-x8-C-x5-C-x3-H type family protein, putative OS=Theobroma cacao GN...	[more]
A0A0B0NF00_GOSAR	4.5e-11	72.09	Uncharacterized protein OS=Gossypium arboreum GN=F383_04055 PE=4 SV=1	[more]

BLAST of CU110142 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449469596\|ref\|XP_004152505.1\|	2.9e-59	83.97	PREDICTED: zinc finger CCCH domain-containing protein 43 isoform X2 [Cucumis sat...	[more]
gi\|778657993\|ref\|XP_011651926.1\|	1.6e-57	81.48	PREDICTED: zinc finger CCCH domain-containing protein 43 isoform X1 [Cucumis sat...	[more]
gi\|659067397\|ref\|XP_008439243.1\|	4.6e-57	80.92	PREDICTED: zinc finger CCCH domain-containing protein 43 [Cucumis melo]	[more]
gi\|778657996\|ref\|XP_011651936.1\|	1.8e-45	95.51	PREDICTED: zinc finger CCCH domain-containing protein 43 isoform X3 [Cucumis sat...	[more]
gi\|590669733\|ref\|XP_007037859.1\|	7.8e-41	69.09	Zinc finger C-x8-C-x5-C-x3-H type family protein, putative [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition
IPR000571	Znf_CCCH

Vocabulary: **Molecular Function**
Term	Definition
GO:0046872	metal ion binding

GO Annotation

GO Assignments

This transcribed_cluster is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
Csa1G050060	Csa1G050060	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
FKNP3UI02K85YP	FKNP3UI02K85YP	EST
FKNP3UI02L9CS4	FKNP3UI02L9CS4	EST
FKNP3UI02LHYB9	FKNP3UI02LHYB9	EST
FKNP3UI02NXNVZ	FKNP3UI02NXNVZ	EST
FKNP3UI02O0R67	FKNP3UI02O0R67	EST
FKNP3UI02O27CC	FKNP3UI02O27CC	EST
G0148375	G0148375	EST
H0024388	H0024388	EST
H0036091	H0036091	EST

InterPro

Analysis Name: InterPro Annotations of cucumber unigene v3
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000571	Zinc finger, CCCH-type	GENE3D	G3DSA:4.10.1000.10		coord: 132..151 score: 1.3E-6coord: 86..106 score: 1.
IPR000571	Zinc finger, CCCH-type	PFAM	PF00642	zf-CCCH	coord: 128..152 score: 4.7E-12coord: 83..105 score: 7.
IPR000571	Zinc finger, CCCH-type	SMART	SM00356	c3hfinal6	coord: 128..153 score: 5.4E-7coord: 81..107 score: 2.
IPR000571	Zinc finger, CCCH-type	PROFILE	PS50103	ZF_C3H1	coord: 80..108 score: 14.483coord: 126..154 score: 16
IPR000571	Zinc finger, CCCH-type	unknown	SSF90229	CCCH zinc finger	coord: 83..108 score: 4.45E-6coord: 126..153 score: 2.7
None	No IPR available	PANTHER	PTHR12506	PROTEIN PHOSPHATASE RELATED	coord: 75..169 score: 1.3
None	No IPR available	PANTHER	PTHR12506:SF20	ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 43	coord: 75..169 score: 1.3