CU109449 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU109449
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionProtein of unknown function, DUF538
LocationChr2 : 7441162 .. 7443105 (-)
Sequence length261
The following sequences are available for this feature:

transcribed_cluster sequence

TTAAGGGAATTCGTGTAGATTTGTCCACCTCTGGTTTTAATTTCATTTCGACGTCGGCGTTGTTGTCAAGCAATTCTCTCTTTCCCTCTTTGAGTCCCCCATTGATTGCACGGCGGCTGATCCGGTTGATCGATCCATCGCCTTCAATGCTGCCTCTCTTGATATGGATCGTCCTCTTTCGACGAAGGAAGACCAAAGACATAATCCCCAGCTTGAAGTCAGTGAACTAAGGGCATCATCATAGATTAGCAATCAAGAATG
BLAST of CU109449 vs. TrEMBL
Match: A0A0A0LN19_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G99990 PE=4 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 1.2e-27
Identity = 65/66 (98.48%), Postives = 65/66 (98.48%), Query Frame = 2

Query: 44  HFDVGVVVKQFSLSLFESPIDCTAADPVDRSIAFNAASLDMDRPLSTKEDQRHNPQLEVS 103
           HFDVGVV KQFSLSLFESPIDCTAADPVDRSIAFNAASLDMDRPLSTKEDQRHNPQLEVS
Sbjct: 144 HFDVGVVDKQFSLSLFESPIDCTAADPVDRSIAFNAASLDMDRPLSTKEDQRHNPQLEVS 203

Query: 104 ELRASS 163
           ELRASS
Sbjct: 204 ELRASS 209

Query: 164 223
           
Sbjct: 264 209

Query: 224 242
           
Sbjct: 324 209

BLAST of CU109449 vs. NCBI nr
Match: gi|449442285|ref|XP_004138912.1| (PREDICTED: uncharacterized protein LOC101222871 [Cucumis sativus])

HSP 1 Score: 130.2 bits (326), Expect = 1.8e-27
Identity = 65/66 (98.48%), Postives = 65/66 (98.48%), Query Frame = 2

Query: 44  HFDVGVVVKQFSLSLFESPIDCTAADPVDRSIAFNAASLDMDRPLSTKEDQRHNPQLEVS 103
           HFDVGVV KQFSLSLFESPIDCTAADPVDRSIAFNAASLDMDRPLSTKEDQRHNPQLEVS
Sbjct: 144 HFDVGVVDKQFSLSLFESPIDCTAADPVDRSIAFNAASLDMDRPLSTKEDQRHNPQLEVS 203

Query: 104 ELRASS 163
           ELRASS
Sbjct: 204 ELRASS 209

Query: 164 223
           
Sbjct: 264 209

Query: 224 242
           
Sbjct: 324 209

BLAST of CU109449 vs. NCBI nr
Match: gi|659082203|ref|XP_008441718.1| (PREDICTED: uncharacterized protein LOC103485796 [Cucumis melo])

HSP 1 Score: 99.8 bits (247), Expect = 2.5e-18
Identity = 54/66 (81.82%), Postives = 56/66 (84.85%), Query Frame = 2

Query: 44  HFDVGVVVKQFSLSLFESPIDCTAADPVDRSIAFNAASLDMDRPLSTKEDQRHNPQLEVS 103
           HFDVGVV KQFSLSLFESP DCTAADPVD+S AFNAASLD DRP STKE Q  N QLE S
Sbjct: 122 HFDVGVVDKQFSLSLFESPPDCTAADPVDQSFAFNAASLDTDRPFSTKEAQ--NLQLEDS 181

Query: 104 ELRASS 163
           ELRA+S
Sbjct: 182 ELRATS 185

Query: 164 223
           
Sbjct: 242 185

Query: 224 242
           
Sbjct: 302 185

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LN19_CUCSA1.2e-2798.48Uncharacterized protein OS=Cucumis sativus GN=Csa_2G99990 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|449442285|ref|XP_004138912.1|1.8e-2798.48PREDICTED: uncharacterized protein LOC101222871 [Cucumis sativus][more]
gi|659082203|ref|XP_008441718.1|2.5e-1881.82PREDICTED: uncharacterized protein LOC103485796 [Cucumis melo][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa2G99990Csa2G99990gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
FKNP3UI02OFVWWFKNP3UI02OFVWWEST
H0124927H0124927EST