CU109101 (transcribed_cluster) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CU109101
Type	transcribed_cluster
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	BTB/POZ and TAZ domain-containing 1-like protein
Location	Chr1 : 3452790 .. 3453496 (-)
Sequence length	432

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

CGGCCGGGGAAGACCCACCTCTCTTTCTTTCTCTCATACTTCTCTTCCTCACACCAACAACACTCAATTTATTTTTCTCCATCTCCATCTCCATCTCCATCTCTCTCATGGAAGCCCTTCATCTTCCTTCCGAAATCCCACCCCCATTTTCTCGCCTCCCCTGTCAAGGATCGCAAATCGGATTTTCCAGGAGATGCCGGAGTCTGACATTCATATCGTTACCTCCGGTGGACTTCGTATACCTGCGCATTCTACCGTACTGGCCTCGGTTTCATCGGTGTTGGAAAACATGATCGAGCAACCGCGAAAGCACAGGAGCTCCGAGAAAGTGATTCAAATGCTTGGAGTTCCGTGTGAGGCAGTTGTTTCGTTCGTTCAATTCCTCTACACATCTAGGTGCCCTGAAGAATATCTAAAGAAATATGGAATTCA

Library


Library category	ESTs
fruit (8DPP) library	3

Homology

[Close]

BLAST of CU109101 vs. Swiss-Prot
Match: BT1_ARATH (BTB/POZ and TAZ domain-containing protein 1 OS=Arabidopsis thaliana GN=BT1 PE=1 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 1.4e-18
Identity = 49/88 (55.68%), Postives = 64/88 (72.73%), Query Frame = 2


Query: 173 ANRIFQEMPESDIHIVTSGGLRIPAHSTVLASVSSVLENMIEQPRKHR--SSEKVIQMLG 232
           AN+I  ++ E+D+ I+TSG   IPAHS +LASVS VL N+IE+PRK    SS+KVI++LG
Sbjct: 15  ANKISYDLVETDVEIITSGRRSIPAHSGILASVSPVLTNIIEKPRKIHGGSSKKVIKILG 74

Query: 233 VPCEAVVSFVQFLYTSRCPEEYLKKYGI 292
           VPC+AV  FV+FLY+    E  ++KYGI
Sbjct: 75  VPCDAVSVFVRFLYSPSVTENEMEKYGI 102

Query: 293  352
           
Sbjct: 135  102

Query: 353  412
           
Sbjct: 195  102

Query: 413  431
           
Sbjct: 255  102

[Close]

BLAST of CU109101 vs. Swiss-Prot
Match: BT2_ARATH (BTB/POZ and TAZ domain-containing protein 2 OS=Arabidopsis thaliana GN=BT2 PE=1 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 3.3e-15
Identity = 43/81 (53.09%), Postives = 60/81 (74.07%), Query Frame = 2


Query: 197 PESDIHIVTSGGLRIPAHSTVLASVSSVLENMIEQP-RKHRS--SEKVIQMLGVPCEAVV 256
           P SD+ IVTS   RIPAHS VLAS S VL N++++P R++R   S++VI++LGVPC+AV 
Sbjct: 32  PTSDVEIVTSDNRRIPAHSGVLASASPVLMNIMKKPMRRYRGCGSKRVIKILGVPCDAVS 91

Query: 257 SFVQFLYTSRCPEEYLKKYGI 316
            F++FLY+S   E+ +++YGI
Sbjct: 92  VFIKFLYSSSLTEDEMERYGI 112

Query: 317  376
           
Sbjct: 152  112

Query: 377  431
           
Sbjct: 212  112

[Close]

BLAST of CU109101 vs. Swiss-Prot
Match: BT3_ARATH (BTB/POZ and TAZ domain-containing protein 3 OS=Arabidopsis thaliana GN=BT3 PE=1 SV=2)

HSP 1 Score: 63.9 bits (154), Expect = 1.6e-09
Identity = 31/83 (37.35%), Postives = 51/83 (61.45%), Query Frame = 2


Query: 176 NRIFQEMPESDIHIVTSGGLRIPAHSTVLASVSSVLENMIEQPRKHRSSEKVIQMLGVPC 235
           +++F+E   +D ++ T      PAHS+VLA+ S V+  ++ Q R  ++    +++ GVPC
Sbjct: 45  DKLFKEGSGADTYVETDNKSHFPAHSSVLAAASPVIATLLNQSRD-KNGNTYLKIHGVPC 104

Query: 236 EAVVSFVQFLYTSRCPEEYLKKY 295
           EAV  F++FLY+S   EE +KK+
Sbjct: 105 EAVYMFIRFLYSSCYEEEEMKKF 126

Query: 296  355
           
Sbjct: 165  126

Query: 356  415
           
Sbjct: 225  126

Query: 416  425
           
Sbjct: 285  126

[Close]

BLAST of CU109101 vs. Swiss-Prot
Match: BT4_ARATH (BTB/POZ and TAZ domain-containing protein 4 OS=Arabidopsis thaliana GN=BT4 PE=1 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 2.2e-06
Identity = 27/83 (32.53%), Postives = 50/83 (60.24%), Query Frame = 2


Query: 176 NRIFQEMPESDIHIVTSGGLRIPAHSTVLASVSSVLENMIEQPRKHRSSEKVIQMLGVPC 235
           +R+F +  ++D+ I T  G  I AH+ +L + S+V++ M++Q ++H      I + GVP 
Sbjct: 51  DRLFNDGYKADVVIYTDNGSIIYAHANILGTASTVIKGMLKQAKRH-GKWHTISIRGVPH 110

Query: 236 EAVVSFVQFLYTSRCPEEYLKKY 295
           +AV  F++FLY+S   +E + ++
Sbjct: 111 DAVRVFIRFLYSSCYEKEEMNEF 132

Query: 296  355
           
Sbjct: 171  132

Query: 356  415
           
Sbjct: 231  132

Query: 416  425
           
Sbjct: 291  132

[Close]

BLAST of CU109101 vs. TrEMBL
Match: A0A0A0LPZ8_CUCSA (Protein binding protein OS=Cucumis sativus GN=Csa_1G032450 PE=4 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 4.4e-38
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 2


Query: 185 FQEMPESDIHIVTSGGLRIPAHSTVLASVSSVLENMIEQPRKHRSSEKVIQMLGVPCEAV 244
           FQEMPESDIHIVTSGGLRIPAHSTVLASVSSVLENMIEQPRKHRSSEKVIQMLGVPCEAV
Sbjct: 26  FQEMPESDIHIVTSGGLRIPAHSTVLASVSSVLENMIEQPRKHRSSEKVIQMLGVPCEAV 85

Query: 245 VSFVQFLYTSRCPEEYLKKYGI 304
           VSFVQFLYTSRCPEEYLKKYGI
Sbjct: 86  VSFVQFLYTSRCPEEYLKKYGI 107

Query: 305  364
           
Sbjct: 146  107

Query: 365  424
           
Sbjct: 206  107

Query: 425  431
           
Sbjct: 266  107

[Close]

BLAST of CU109101 vs. TrEMBL
Match: A0A0A0LPZ8_CUCSA (Protein binding protein OS=Cucumis sativus GN=Csa_1G032450 PE=4 SV=1)

HSP 1 Score: 38.9 bits (89), Expect = 6.2e+00
Identity = 16/16 (100.00%), Postives = 16/16 (100.00%), Query Frame = 1


Query: 139 HPHFLASPVKDRKSDF 187
           HPHFLASPVKDRKSDF
Sbjct: 11  HPHFLASPVKDRKSDF 26

HSP 2 Score: 123.2 bits (308), Expect = 2.5e-25
Identity = 61/93 (65.59%), Postives = 77/93 (82.80%), Query Frame = 2


Query: 152 SPPLSRIANRIFQEMPESDIHIVTSGGLRIPAHSTVLASVSSVLENMIEQPRKHRSSEKV 211
           SPP    A+   +E+PE D+ I+TSGGLRIPAHS +LASVS VLEN+I+QPRKHRSSE+V
Sbjct: 25  SPPAGG-ADPFRRELPEPDVWILTSGGLRIPAHSGILASVSPVLENIIDQPRKHRSSERV 84

Query: 212 IQMLGVPCEAVVSFVQFLYTSRCPEEYLKKYGI 271
           I +LGVPC+AV +FV FLY+SRC E+ ++KYGI
Sbjct: 85  IPILGVPCDAVSAFVGFLYSSRCTEDQMQKYGI 116

Query: 272  331
           
Sbjct: 145  116

Query: 332  391
           
Sbjct: 205  116

Query: 392  431
           
Sbjct: 265  116

[Close]

BLAST of CU109101 vs. TrEMBL
Match: A0A0B0PJK7_GOSAR (BTB/POZ and TAZ domain-containing 1-like protein OS=Gossypium arboreum GN=F383_31732 PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 7.2e-25
Identity = 56/80 (70.00%), Postives = 69/80 (86.25%), Query Frame = 2


Query: 191 EMPESDIHIVTSGGLRIPAHSTVLASVSSVLENMIEQPRKHRSSEKVIQMLGVPCEAVVS 250
           E+PE DIHI+TSGG RIPAHS++LA  S VLEN+IEQPRKHRSSE+VI +LGVPC+AV +
Sbjct: 15  ELPEPDIHILTSGGFRIPAHSSILAMASPVLENIIEQPRKHRSSERVIPILGVPCDAVSA 74

Query: 251 FVQFLYTSRCPEEYLKKYGI 310
           FV +LY+SRC E+ + KYGI
Sbjct: 75  FVDYLYSSRCKEDEIAKYGI 94

Query: 311  370
           
Sbjct: 135  94

Query: 371  430
           
Sbjct: 195  94

[Close]

BLAST of CU109101 vs. TrEMBL
Match: A0A0A0LWH0_CUCSA (Protein binding protein OS=Cucumis sativus GN=Csa_1G049460 PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 9.4e-25
Identity = 57/91 (62.64%), Postives = 76/91 (83.52%), Query Frame = 2


Query: 158 PLSRIANRIFQEMPESDIHIVTSGGLRIPAHSTVLASVSSVLENMIEQPRKHRSSEKVIQ 217
           P   I   IF+E+PE D+HI+ SGGLRIPAHS +LAS+S VLE++I++PRK R++EKVI 
Sbjct: 33  PAHTITPSIFRELPEPDVHILASGGLRIPAHSGILASISPVLEHVIDRPRKKRTAEKVIS 92

Query: 218 MLGVPCEAVVSFVQFLYTSRCPEEYLKKYGI 277
           +LGVP +AVVSFV+FLY+SRC  E+L+K+GI
Sbjct: 93  ILGVPSDAVVSFVRFLYSSRCTAEHLEKHGI 123

Query: 278  337
           
Sbjct: 153  123

Query: 338  397
           
Sbjct: 213  123

Query: 398  431
           
Sbjct: 273  123

[Close]

BLAST of CU109101 vs. TrEMBL
Match: A0A0D2PMI9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G062300 PE=4 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 1.6e-24
Identity = 56/80 (70.00%), Postives = 68/80 (85.00%), Query Frame = 2


Query: 191 EMPESDIHIVTSGGLRIPAHSTVLASVSSVLENMIEQPRKHRSSEKVIQMLGVPCEAVVS 250
           E+PE DIHI+TSGG RIPAHS++LA  S VLEN+IEQPRKHRSSE+VI +LGVPC+AV +
Sbjct: 15  ELPEPDIHILTSGGFRIPAHSSILAMASPVLENIIEQPRKHRSSERVIPILGVPCDAVSA 74

Query: 251 FVQFLYTSRCPEEYLKKYGI 310
            V +LY+SRC EE + KYGI
Sbjct: 75  LVDYLYSSRCKEEEIAKYGI 94

Query: 311  370
           
Sbjct: 135  94

Query: 371  430
           
Sbjct: 195  94

[Close]

BLAST of CU109101 vs. NCBI nr
Match: gi|449439605|ref|XP_004137576.1| (PREDICTED: BTB/POZ and TAZ domain-containing protein 1-like [Cucumis sativus])

HSP 1 Score: 166.0 bits (419), Expect = 4.8e-38
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 2


Query: 185 FQEMPESDIHIVTSGGLRIPAHSTVLASVSSVLENMIEQPRKHRSSEKVIQMLGVPCEAV 244
           FQEMPESDIHIVTSGGLRIPAHSTVLASVSSVLENMIEQPRKHRSSEKVIQMLGVPCEAV
Sbjct: 26  FQEMPESDIHIVTSGGLRIPAHSTVLASVSSVLENMIEQPRKHRSSEKVIQMLGVPCEAV 85

Query: 245 VSFVQFLYTSRCPEEYLKKYGI 304
           VSFVQFLYTSRCPEEYLKKYGI
Sbjct: 86  VSFVQFLYTSRCPEEYLKKYGI 107

Query: 305  364
           
Sbjct: 146  107

Query: 365  424
           
Sbjct: 206  107

Query: 425  431
           
Sbjct: 266  107

[Close]

BLAST of CU109101 vs. NCBI nr
Match: gi|659066340|ref|XP_008439713.1| (PREDICTED: BTB/POZ and TAZ domain-containing protein 1-like [Cucumis melo])

HSP 1 Score: 158.7 bits (400), Expect = 7.6e-36
Identity = 77/82 (93.90%), Postives = 80/82 (97.56%), Query Frame = 2


Query: 185 FQEMPESDIHIVTSGGLRIPAHSTVLASVSSVLENMIEQPRKHRSSEKVIQMLGVPCEAV 244
           FQE+PE DIHIVTS GLRIPAHST+LASVSSVLENMIEQPRKHRSSEKVIQ+LGVPCEAV
Sbjct: 26  FQELPEPDIHIVTSAGLRIPAHSTILASVSSVLENMIEQPRKHRSSEKVIQILGVPCEAV 85

Query: 245 VSFVQFLYTSRCPEEYLKKYGI 304
           VSFVQFLYTSRCPEEYLKKYGI
Sbjct: 86  VSFVQFLYTSRCPEEYLKKYGI 107

Query: 305  364
           
Sbjct: 146  107

Query: 365  424
           
Sbjct: 206  107

Query: 425  431
           
Sbjct: 266  107

[Close]

BLAST of CU109101 vs. NCBI nr
Match: gi|1009130673|ref|XP_015882428.1| (PREDICTED: BTB/POZ and TAZ domain-containing protein 1-like [Ziziphus jujuba])

HSP 1 Score: 126.3 bits (316), Expect = 4.2e-26
Identity = 59/81 (72.84%), Postives = 73/81 (90.12%), Query Frame = 2


Query: 188 QEMPESDIHIVTSGGLRIPAHSTVLASVSSVLENMIEQPRKHRSSEKVIQMLGVPCEAVV 247
           +E+PE D+ I+TSGGLRIPAHS++LASVS +LEN+I++PRKH SSEKVI +LGVPC+AVV
Sbjct: 27  RELPEPDVQILTSGGLRIPAHSSILASVSPILENIIDRPRKHTSSEKVIPVLGVPCDAVV 86

Query: 248 SFVQFLYTSRCPEEYLKKYGI 307
            FVQFLY+SRC EE L+KYGI
Sbjct: 87  VFVQFLYSSRCTEEDLEKYGI 107

Query: 308  367
           
Sbjct: 147  107

Query: 368  427
           
Sbjct: 207  107

Query: 428  431
           
Sbjct: 267  107

[Close]

BLAST of CU109101 vs. NCBI nr
Match: gi|702497458|ref|XP_010037482.1| (PREDICTED: BTB/POZ and TAZ domain-containing protein 1-like [Eucalyptus grandis])

HSP 1 Score: 123.6 bits (309), Expect = 2.7e-25
Identity = 61/93 (65.59%), Postives = 77/93 (82.80%), Query Frame = 2


Query: 152 SPPLSRIANRIFQEMPESDIHIVTSGGLRIPAHSTVLASVSSVLENMIEQPRKHRSSEKV 211
           SPP    A+   +E+PE D+ I+TSGGLRIPAHS +LASVS VLEN+I+QPRKHRSSE+V
Sbjct: 25  SPPAGG-ADPFRRELPEPDVWILTSGGLRIPAHSGILASVSPVLENIIDQPRKHRSSERV 84

Query: 212 IQMLGVPCEAVVSFVQFLYTSRCPEEYLKKYGI 271
           I +LGVPC+AV +FV FLY+SRC E+ ++KYGI
Sbjct: 85  IPILGVPCDAVSAFVGFLYSSRCTEDQMQKYGI 116

Query: 272  331
           
Sbjct: 145  116

Query: 332  391
           
Sbjct: 205  116

Query: 392  431
           
Sbjct: 265  116

[Close]

BLAST of CU109101 vs. NCBI nr
Match: gi|449469588|ref|XP_004152501.1| (PREDICTED: BTB/POZ and TAZ domain-containing protein 1 [Cucumis sativus])

HSP 1 Score: 122.1 bits (305), Expect = 7.9e-25
Identity = 57/91 (62.64%), Postives = 76/91 (83.52%), Query Frame = 2


Query: 158 PLSRIANRIFQEMPESDIHIVTSGGLRIPAHSTVLASVSSVLENMIEQPRKHRSSEKVIQ 217
           P   I   IF+E+PE D+HI+ SGGLRIPAHS +LAS+S VLE++I++PRK R++EKVI 
Sbjct: 33  PAHTITPSIFRELPEPDVHILASGGLRIPAHSGILASISPVLEHVIDRPRKKRTAEKVIS 92

Query: 218 MLGVPCEAVVSFVQFLYTSRCPEEYLKKYGI 277
           +LGVP +AVVSFV+FLY+SRC  E+L+K+GI
Sbjct: 93  ILGVPSDAVVSFVRFLYSSRCTAEHLEKHGI 123

Query: 278  337
           
Sbjct: 153  123

Query: 338  397
           
Sbjct: 213  123

Query: 398  431
           
Sbjct: 273  123

The following BLAST results are available for this feature:

BLAST of CU109101 vs. Swiss-Prot


Match Name	E-value	Identity	Description
BT1_ARATH	1.4e-18	55.68	BTB/POZ and TAZ domain-containing protein 1 OS=Arabidopsis thaliana GN=BT1 PE=1 ...	[more]
BT2_ARATH	3.3e-15	53.09	BTB/POZ and TAZ domain-containing protein 2 OS=Arabidopsis thaliana GN=BT2 PE=1 ...	[more]
BT3_ARATH	1.6e-09	37.35	BTB/POZ and TAZ domain-containing protein 3 OS=Arabidopsis thaliana GN=BT3 PE=1 ...	[more]
BT4_ARATH	2.2e-06	32.53	BTB/POZ and TAZ domain-containing protein 4 OS=Arabidopsis thaliana GN=BT4 PE=1 ...	[more]

BLAST of CU109101 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LPZ8_CUCSA	4.4e-38	100.00	Protein binding protein OS=Cucumis sativus GN=Csa_1G032450 PE=4 SV=1	[more]
A0A0A0LPZ8_CUCSA	6.2e+00	100.00	Protein binding protein OS=Cucumis sativus GN=Csa_1G032450 PE=4 SV=1	[more]
A0A0B0PJK7_GOSAR	7.2e-25	70.00	BTB/POZ and TAZ domain-containing 1-like protein OS=Gossypium arboreum GN=F383_3...	[more]
A0A0A0LWH0_CUCSA	9.4e-25	62.64	Protein binding protein OS=Cucumis sativus GN=Csa_1G049460 PE=4 SV=1	[more]
A0A0D2PMI9_GOSRA	1.6e-24	70.00	Uncharacterized protein OS=Gossypium raimondii GN=B456_001G062300 PE=4 SV=1	[more]

BLAST of CU109101 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449439605\|ref\|XP_004137576.1\|	4.8e-38	100.00	PREDICTED: BTB/POZ and TAZ domain-containing protein 1-like [Cucumis sativus]	[more]
gi\|659066340\|ref\|XP_008439713.1\|	7.6e-36	93.90	PREDICTED: BTB/POZ and TAZ domain-containing protein 1-like [Cucumis melo]	[more]
gi\|1009130673\|ref\|XP_015882428.1\|	4.2e-26	72.84	PREDICTED: BTB/POZ and TAZ domain-containing protein 1-like [Ziziphus jujuba]	[more]
gi\|702497458\|ref\|XP_010037482.1\|	2.7e-25	65.59	PREDICTED: BTB/POZ and TAZ domain-containing protein 1-like [Eucalyptus grandis]	[more]
gi\|449469588\|ref\|XP_004152501.1\|	7.9e-25	62.64	PREDICTED: BTB/POZ and TAZ domain-containing protein 1 [Cucumis sativus]	[more]

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
Csa1G032450	Csa1G032450	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
FKNP3UI02K1CMO	FKNP3UI02K1CMO	EST
FKNP3UI02KMLHX	FKNP3UI02KMLHX	EST
FKNP3UI02LOUWH	FKNP3UI02LOUWH	EST