CU107689 (transcribed_cluster) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CU107689
Type	transcribed_cluster
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Unknown protein
Location	Chr4 : 9246725 .. 9247859 (+)
Sequence length	815

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

TTTTTTTTTCCTTAAACTCAAAAACATGAATCTAATTCTATTTCTGAAATCCAACATCTTGTTTGGCTTCCCTCTAGGCACCCACTCATCAAGTATGAATAAAACATATGCTTAAGCTACATTTTTGATTTTACACTATGTCCAAGGGACTTGAATAAACTACATGGACCAAAATATTTATGAAGTTCAACGACTAAAAGCTTAAACTACAATGCTTTCTTCTATTAACTTGATGCAACCTCAAAACTAAACTTTGCTAATTAACAATGCCAAGACTAAACGAACCAAACTGTTGTTTTAATTGATTGAAGCTCATGCCAGCAGAAAGAGTCTGTGAAGATCCAAGAACTGAGATGGATACTATAAATATGAACCTCTCTTTGTGGGAATTAGCAGATTGAGAGTTTAGGTTGAGAAGGAGAGATGGGAGACCCGTCACTGCTACGGTATTCTCCACACCACGCATCTTGAACCTGAGCAGCAAACTGCAAATTCCAGAGGACATCTTCAAGTGAAGGTCTGGTGACTGGATCCTTGAGCAGGCACCTGACACATACTTCCATCATTGTCTTCAATGATTGATCTAAGCATTCGTTTTGAATGCTCGGATCAACTATGCTCCTTCGAGCAATGCTATCGGATGAAATGGCTTCTTGTAACTTCTCTCTTAGAACATTAATTTCGTTTTTCGTATTTGAGTGCTCGCCCACGGATGATTTCTAGTAATATTACTCCAAAGTCGTAGATGTCAGCTTGAGCTTCCTGATTGATCCTTTCATGGCAGCCAGGATCTTTGGATCCACCGGAAGAAACTC

Library


Library category	ESTs
Cucumber fruit library	1
gynoecious flower library	4
hermaphrodite flower library	3

Homology

[Close]

BLAST of CU107689 vs. Swiss-Prot
Match: Y3037_ARATH (Probable inactive leucine-rich repeat receptor-like protein kinase At3g03770 OS=Arabidopsis thaliana GN=At3g03770 PE=2 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 5.3e-22
Identity = 56/120 (46.67%), Postives = 72/120 (60.00%), Query Frame = -1


Query: 357 VGEHSNTKNEINVLREKLQEXXXXXXXXXXXXVDPSIQNECLDQSLKTMMEVCVRCLLKD 416
           VG     K++++VL+E+LQ             VDP++   C DQSLKTMME+CVRCLLKD
Sbjct: 675 VGRPLRAKSQVDVLKEQLQASISADDGARRSMVDPTVHRACSDQSLKTMMEICVRCLLKD 734

Query: 417 PVTRPSLEDVLWNLQFAAQVQDAWCGEYRSSD--GSPISPSQPKLSIC*FPQREVHIYSI 476
           P+ RPS+EDVLWNLQFA+QVQ+ W      S   GSP SP+   L     P   +H+ ++
Sbjct: 735 PLERPSIEDVLWNLQFASQVQEGWLQNSNPSSNLGSP-SPAASSLP----PPSRLHVTTL 789

Query: 477  536
           
Sbjct: 795  789

Query: 537  596
           
Sbjct: 855  789

Query: 597  656
           
Sbjct: 915  789

Query: 657  711
           
Sbjct: 975  789

HSP 2 Score: 37.0 bits (84), Expect = 4.0e-01
Identity = 19/37 (51.35%), Postives = 20/37 (54.05%), Query Frame = -3


Query: 694 GGSKDPGCHERINQEAQADIYDFGVILLEIIRGRALK 753
           G    P     I  E + DIYDFGVILLE+I GR L+
Sbjct: 644 GSRSGPKGTPSIKDEDKIDIYDFGVILLELIVGRPLR 680

Query: 754  805
           
Sbjct: 704  680

[Close]

BLAST of CU107689 vs. Swiss-Prot
Match: Y2278_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g02780 OS=Arabidopsis thaliana GN=At2g02780 PE=2 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 3.4e-08
Identity = 30/86 (34.88%), Postives = 44/86 (51.16%), Query Frame = -1


Query: 438 NEINVLREKLQEXXXXXXXXXXXXVDPSIQNECLDQSLKTMMEVCVRCLLKDPVTRPSLE 497
           +E+  L+ +L+              DPS++     +SL+T +E  + CL +D   RPS+E
Sbjct: 651 SEMGSLKLQLENGLRDEPSVLSSLADPSVKGSYAYESLRTTVEFAINCLCEDQSKRPSIE 710

Query: 498 DVLWNLQFAAQVQDAW---CGEYRSS 557
           DV+WNLQ+  QVQ  W    G + SS
Sbjct: 711 DVVWNLQYTIQVQQGWRPSSGNHESS 736

Query: 558  617
           
Sbjct: 771  736

Query: 618  677
           
Sbjct: 831  736

Query: 678  687
           
Sbjct: 891  736

HSP 2 Score: 29.3 bits (64), Expect = 8.3e+01
Identity = 15/34 (44.12%), Postives = 20/34 (58.82%), Query Frame = -3


Query: 697 SKDPGCHERINQEAQADIYDFGVILLEIIRGRAL 756
           +K P  +E   +E   D+Y FGVILL+II G+ +
Sbjct: 616 AKKPRSNEDREKE---DVYQFGVILLQIITGKVV 646

Query: 757  799
           
Sbjct: 676  646

[Close]

BLAST of CU107689 vs. Swiss-Prot
Match: Y1143_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g14390 OS=Arabidopsis thaliana GN=At1g14390 PE=2 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 2.2e-07
Identity = 26/76 (34.21%), Postives = 39/76 (51.32%), Query Frame = -1


Query: 459 NEINVLREKLQEXXXXXXXXXXXXVDPSIQNECLDQSLKTMMEVCVRCLLKDPVTRPSLE 518
           +E+  L+ +L+              DP ++     +SL+T +E  + CL +D   RPS+E
Sbjct: 640 SELGSLKLQLENSLRDEPSVLRSLADPCVRGTYAYESLRTTVEFAINCLCEDQRKRPSIE 699

Query: 519 DVLWNLQFAAQVQDAW 578
           DV+WNLQ+  QVQ  W
Sbjct: 700 DVVWNLQYTIQVQQGW 715

Query: 579  638
           
Sbjct: 760  715

Query: 639  687
           
Sbjct: 820  715

[Close]

BLAST of CU107689 vs. TrEMBL
Match: A0A0A0KZW8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G188400 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 9.4e-42
Identity = 88/105 (83.81%), Postives = 89/105 (84.76%), Query Frame = -1


Query: 393 GEHSNTKNEINVLREKLQEXXXXXXXXXXXXVDPSIQNECLDQSLKTMMEVCVRCLLKDP 452
           G    +KNEINVLREKLQE            VDPSIQNECLDQSLKTMMEVCVRCLLKDP
Sbjct: 677 GRALKSKNEINVLREKLQEAISSDSIARRSIVDPSIQNECLDQSLKTMMEVCVRCLLKDP 736

Query: 453 VTRPSLEDVLWNLQFAAQVQDAWCGEYRSSDGSPISPSQPKLSIC 512
           VTRPSLEDVLWNLQFAAQVQDAWCGEYRSSDGSPISPSQPKLSIC
Sbjct: 737 VTRPSLEDVLWNLQFAAQVQDAWCGEYRSSDGSPISPSQPKLSIC 781

Query: 513  572
           
Sbjct: 797  781

Query: 573  632
           
Sbjct: 857  781

Query: 633  692
           
Sbjct: 917  781

Query: 693  708
           
Sbjct: 977  781

[Close]

BLAST of CU107689 vs. TrEMBL
Match: A0A0A0KZW8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G188400 PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 4.1e-13
Identity = 40/40 (100.00%), Postives = 40/40 (100.00%), Query Frame = -3


Query: 694 VSSGGSKDPGCHERINQEAQADIYDFGVILLEIIRGRALK 753
           VSSGGSKDPGCHERINQEAQADIYDFGVILLEIIRGRALK
Sbjct: 642 VSSGGSKDPGCHERINQEAQADIYDFGVILLEIIRGRALK 681

Query: 754  813
           
Sbjct: 702  681

HSP 2 Score: 125.9 bits (315), Expect = 7.3e-26
Identity = 60/100 (60.00%), Postives = 71/100 (71.00%), Query Frame = -1


Query: 411 VGEHSNTKNEINVLREKLQEXXXXXXXXXXXXVDPSIQNECLDQSLKTMMEVCVRCLLKD 470
           +G    TKNE+ +L+ +LQ              DP+ Q  C DQSLKTMME+CVRCLLKD
Sbjct: 683 LGRPLKTKNEVQILKNQLQAILATDDVTRRSVADPAAQKSCSDQSLKTMMEICVRCLLKD 742

Query: 471 PVTRPSLEDVLWNLQFAAQVQDAWCGEYRSSDGSPISPSQ 530
           P  RPS+EDVLWNLQFAAQVQDAW G+ +SS+GSP SPSQ
Sbjct: 743 PTERPSVEDVLWNLQFAAQVQDAWRGDSQSSEGSPGSPSQ 782

Query: 531  590
           
Sbjct: 803  782

Query: 591  650
           
Sbjct: 863  782

Query: 651  710
           
Sbjct: 923  782

[Close]

BLAST of CU107689 vs. TrEMBL
Match: A0A061EZH0_THECC (Leucine-rich repeat protein kinase family protein isoform 1 OS=Theobroma cacao GN=TCM_025852 PE=4 SV=1)

HSP 1 Score: 42.7 bits (99), Expect = 8.1e-01
Identity = 19/34 (55.88%), Postives = 25/34 (73.53%), Query Frame = -3


Query: 694 KDPGCHERINQEAQADIYDFGVILLEIIRGRALK 753
           KDP    R++ + + D+YDFGVILLE+I GR LK
Sbjct: 655 KDPSNSARVSYDYKVDVYDFGVILLEMILGRPLK 688

Query: 754  796
           
Sbjct: 715  688

HSP 2 Score: 125.6 bits (314), Expect = 9.5e-26
Identity = 61/101 (60.40%), Postives = 75/101 (74.26%), Query Frame = -1


Query: 408 VGEHSNTKNEINVLREKLQEXXXXXXXXXXXXVDPSIQNECLDQSLKTMMEVCVRCLLKD 467
           VG   N+ NE++VL+++LQ             VDP+++ +C DQSLKTMMEVCVRCLLK+
Sbjct: 676 VGSPLNSMNEVDVLKDRLQASIISDEAARRSMVDPAVKRKCSDQSLKTMMEVCVRCLLKN 735

Query: 468 PVTRPSLEDVLWNLQFAAQVQDAWCGEYRSSDGSPISPSQP 527
           P  RPS+EDVLWNLQFAAQVQD W G+  SS+GSPISPS P
Sbjct: 736 PADRPSVEDVLWNLQFAAQVQDGWRGD--SSEGSPISPSNP 774

Query: 528  587
           
Sbjct: 796  774

Query: 588  647
           
Sbjct: 856  774

Query: 648  707
           
Sbjct: 916  774

Query: 708  711
           
Sbjct: 976  774

[Close]

BLAST of CU107689 vs. TrEMBL
Match: B9SI80_RICCO (Leucine-rich repeat protein, putative OS=Ricinus communis GN=RCOM_1321720 PE=4 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 5.6e-02
Identity = 24/39 (61.54%), Postives = 28/39 (71.79%), Query Frame = -3


Query: 697 VSSGGSKDPGCHERINQEAQADIYDFGVILLEIIRGRAL 756
           VSSGGS DP    R ++E + D+YDFGVILLEII G  L
Sbjct: 642 VSSGGSTDPITVARKDEEEKVDVYDFGVILLEIIVGSPL 680

Query: 757  814
           
Sbjct: 702  680

HSP 2 Score: 122.1 bits (305), Expect = 1.0e-24
Identity = 55/102 (53.92%), Postives = 73/102 (71.57%), Query Frame = -1


Query: 405 VGEHSNTKNEINVLREKLQEXXXXXXXXXXXXVDPSIQNECLDQSLKTMMEVCVRCLLKD 464
           +G  S ++N++ VL+ +L+              DP+++  C DQSLKTMME+CVRCL+KD
Sbjct: 682 LGRPSKSRNQVQVLKNQLEAIMATDDATRRRVADPAVRTSCSDQSLKTMMEICVRCLVKD 741

Query: 465 PVTRPSLEDVLWNLQFAAQVQDAWCGEYRSSDGSPISPSQPK 524
           P  RPS+EDVLWNLQFAAQVQDAW  +  SS+GSPISP +P+
Sbjct: 742 PAERPSIEDVLWNLQFAAQVQDAWRVDSHSSEGSPISPCEPQ 783

Query: 525  584
           
Sbjct: 802  783

Query: 585  644
           
Sbjct: 862  783

Query: 645  704
           
Sbjct: 922  783

Query: 705  711
           
Sbjct: 982  783

[Close]

BLAST of CU107689 vs. TrEMBL
Match: A0A0D2TLJ4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G256600 PE=4 SV=1)

HSP 1 Score: 41.6 bits (96), Expect = 1.8e+00
Identity = 19/39 (48.72%), Postives = 25/39 (64.10%), Query Frame = -3


Query: 694 SSGGSKDPGCHERINQEAQADIYDFGVILLEIIRGRALK 753
           +S   KDP    R+  + + D+YDFGVILLE+I GR  K
Sbjct: 649 TSAPPKDPSTSARVTYDDKVDVYDFGVILLEMILGRPSK 687

Query: 754  811
           
Sbjct: 709  687

HSP 2 Score: 122.1 bits (305), Expect = 1.0e-24
Identity = 55/102 (53.92%), Postives = 73/102 (71.57%), Query Frame = -1


Query: 405 VGEHSNTKNEINVLREKLQEXXXXXXXXXXXXVDPSIQNECLDQSLKTMMEVCVRCLLKD 464
           +G  S ++N++ VL+ +L+              DP+++  C DQSLKTMME+CVRCL+KD
Sbjct: 682 LGRPSKSRNQVQVLKNQLEAIMATDDATRRRVADPTVRTSCSDQSLKTMMEICVRCLVKD 741

Query: 465 PVTRPSLEDVLWNLQFAAQVQDAWCGEYRSSDGSPISPSQPK 524
           P  RPS+EDVLWNLQFAAQVQDAW  +  SS+GSPISP +P+
Sbjct: 742 PAERPSIEDVLWNLQFAAQVQDAWRVDSHSSEGSPISPCEPQ 783

Query: 525  584
           
Sbjct: 802  783

Query: 585  644
           
Sbjct: 862  783

Query: 645  704
           
Sbjct: 922  783

Query: 705  711
           
Sbjct: 982  783

[Close]

BLAST of CU107689 vs. NCBI nr
Match: gi|449462762|ref|XP_004149109.1| (PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At3g03770 [Cucumis sativus])

HSP 1 Score: 180.6 bits (457), Expect = 3.6e-42
Identity = 88/105 (83.81%), Postives = 89/105 (84.76%), Query Frame = -1


Query: 393 GEHSNTKNEINVLREKLQEXXXXXXXXXXXXVDPSIQNECLDQSLKTMMEVCVRCLLKDP 452
           G    +KNEINVLREKLQE            VDPSIQNECLDQSLKTMMEVCVRCLLKDP
Sbjct: 677 GRALKSKNEINVLREKLQEAISSDSIARRSIVDPSIQNECLDQSLKTMMEVCVRCLLKDP 736

Query: 453 VTRPSLEDVLWNLQFAAQVQDAWCGEYRSSDGSPISPSQPKLSIC 512
           VTRPSLEDVLWNLQFAAQVQDAWCGEYRSSDGSPISPSQPKLSIC
Sbjct: 737 VTRPSLEDVLWNLQFAAQVQDAWCGEYRSSDGSPISPSQPKLSIC 781

Query: 513  572
           
Sbjct: 797  781

Query: 573  632
           
Sbjct: 857  781

Query: 633  692
           
Sbjct: 917  781

Query: 693  708
           
Sbjct: 977  781

[Close]

BLAST of CU107689 vs. NCBI nr
Match: gi|659082760|ref|XP_008442018.1| (PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At3g03770 [Cucumis melo])

HSP 1 Score: 174.9 bits (442), Expect = 2.0e-40
Identity = 86/105 (81.90%), Postives = 88/105 (83.81%), Query Frame = -1


Query: 393 GEHSNTKNEINVLREKLQEXXXXXXXXXXXXVDPSIQNECLDQSLKTMMEVCVRCLLKDP 452
           G    +K+EINVLREKLQE            VD SIQNECLDQSLKTMMEVCVRCLLKDP
Sbjct: 677 GRALKSKSEINVLREKLQEAISSDSIARRSIVDLSIQNECLDQSLKTMMEVCVRCLLKDP 736

Query: 453 VTRPSLEDVLWNLQFAAQVQDAWCGEYRSSDGSPISPSQPKLSIC 512
           VTRPSLEDVLWNLQFAAQVQDAWCGEYRSSDGSPISPSQPKLSIC
Sbjct: 737 VTRPSLEDVLWNLQFAAQVQDAWCGEYRSSDGSPISPSQPKLSIC 781

Query: 513  572
           
Sbjct: 797  781

Query: 573  632
           
Sbjct: 857  781

Query: 633  692
           
Sbjct: 917  781

Query: 693  708
           
Sbjct: 977  781

[Close]

BLAST of CU107689 vs. NCBI nr
Match: gi|590640639|ref|XP_007030007.1| (Leucine-rich repeat protein kinase family protein isoform 1 [Theobroma cacao])

HSP 1 Score: 127.5 bits (319), Expect = 3.6e-26
Identity = 60/100 (60.00%), Postives = 71/100 (71.00%), Query Frame = -1


Query: 411 VGEHSNTKNEINVLREKLQEXXXXXXXXXXXXVDPSIQNECLDQSLKTMMEVCVRCLLKD 470
           +G    TKNE+ +L+ +LQ              DP+ Q  C DQSLKTMME+CVRCLLKD
Sbjct: 683 LGRPLKTKNEVQILKNQLQAILATDDVTRRSVADPAAQKSCSDQSLKTMMEICVRCLLKD 742

Query: 471 PVTRPSLEDVLWNLQFAAQVQDAWCGEYRSSDGSPISPSQ 530
           P  RPS+EDVLWNLQFAAQVQDAW G+ +SS+GSP SPSQ
Sbjct: 743 PTERPSVEDVLWNLQFAAQVQDAWRGDSQSSEGSPGSPSQ 782

Query: 531  590
           
Sbjct: 803  782

Query: 591  650
           
Sbjct: 863  782

Query: 651  710
           
Sbjct: 923  782

[Close]

BLAST of CU107689 vs. NCBI nr
Match: gi|255569464|ref|XP_002525699.1| (PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At3g03770 [Ricinus communis])

HSP 1 Score: 126.7 bits (317), Expect = 6.1e-26
Identity = 61/101 (60.40%), Postives = 75/101 (74.26%), Query Frame = -1


Query: 408 VGEHSNTKNEINVLREKLQEXXXXXXXXXXXXVDPSIQNECLDQSLKTMMEVCVRCLLKD 467
           VG   N+ NE++VL+++LQ             VDP+++ +C DQSLKTMMEVCVRCLLK+
Sbjct: 676 VGSPLNSMNEVDVLKDRLQASIISDEAARRSMVDPAVKRKCSDQSLKTMMEVCVRCLLKN 735

Query: 468 PVTRPSLEDVLWNLQFAAQVQDAWCGEYRSSDGSPISPSQP 527
           P  RPS+EDVLWNLQFAAQVQD W G+  SS+GSPISPS P
Sbjct: 736 PADRPSVEDVLWNLQFAAQVQDGWRGD--SSEGSPISPSNP 774

Query: 528  587
           
Sbjct: 796  774

Query: 588  647
           
Sbjct: 856  774

Query: 648  707
           
Sbjct: 916  774

Query: 708  711
           
Sbjct: 976  774

[Close]

BLAST of CU107689 vs. NCBI nr
Match: gi|823194985|ref|XP_012492482.1| (PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At3g03770 [Gossypium raimondii])

HSP 1 Score: 123.6 bits (309), Expect = 5.2e-25
Identity = 55/102 (53.92%), Postives = 73/102 (71.57%), Query Frame = -1


Query: 405 VGEHSNTKNEINVLREKLQEXXXXXXXXXXXXVDPSIQNECLDQSLKTMMEVCVRCLLKD 464
           +G  S ++N++ VL+ +L+              DP+++  C DQSLKTMME+CVRCL+KD
Sbjct: 682 LGRPSKSRNQVQVLKNQLEAIMATDDATRRRVADPAVRTSCSDQSLKTMMEICVRCLVKD 741

Query: 465 PVTRPSLEDVLWNLQFAAQVQDAWCGEYRSSDGSPISPSQPK 524
           P  RPS+EDVLWNLQFAAQVQDAW  +  SS+GSPISP +P+
Sbjct: 742 PAERPSIEDVLWNLQFAAQVQDAWRVDSHSSEGSPISPCEPQ 783

Query: 525  584
           
Sbjct: 802  783

Query: 585  644
           
Sbjct: 862  783

Query: 645  704
           
Sbjct: 922  783

Query: 705  711
           
Sbjct: 982  783

The following BLAST results are available for this feature:

BLAST of CU107689 vs. Swiss-Prot


Match Name	E-value	Identity	Description
Y3037_ARATH	5.3e-22	46.67	Probable inactive leucine-rich repeat receptor-like protein kinase At3g03770 OS=...	[more]
Y2278_ARATH	3.4e-08	34.88	Probable LRR receptor-like serine/threonine-protein kinase At2g02780 OS=Arabidop...	[more]
Y1143_ARATH	2.2e-07	34.21	Probable LRR receptor-like serine/threonine-protein kinase At1g14390 OS=Arabidop...	[more]

BLAST of CU107689 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KZW8_CUCSA	9.4e-42	83.81	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G188400 PE=4 SV=1	[more]
A0A0A0KZW8_CUCSA	4.1e-13	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G188400 PE=4 SV=1	[more]
A0A061EZH0_THECC	8.1e-01	55.88	Leucine-rich repeat protein kinase family protein isoform 1 OS=Theobroma cacao G...	[more]
B9SI80_RICCO	5.6e-02	61.54	Leucine-rich repeat protein, putative OS=Ricinus communis GN=RCOM_1321720 PE=4 S...	[more]
A0A0D2TLJ4_GOSRA	1.8e+00	48.72	Uncharacterized protein OS=Gossypium raimondii GN=B456_007G256600 PE=4 SV=1	[more]

BLAST of CU107689 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449462762\|ref\|XP_004149109.1\|	3.6e-42	83.81	PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At...	[more]
gi\|659082760\|ref\|XP_008442018.1\|	2.0e-40	81.90	PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At...	[more]
gi\|590640639\|ref\|XP_007030007.1\|	3.6e-26	60.00	Leucine-rich repeat protein kinase family protein isoform 1 [Theobroma cacao]	[more]
gi\|255569464\|ref\|XP_002525699.1\|	6.1e-26	60.40	PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At...	[more]
gi\|823194985\|ref\|XP_012492482.1\|	5.2e-25	53.92	PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At...	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition
IPR011009	Kinase-like_dom_sf

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
Csa4G188400	Csa4G188400	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
Cuc6_3_D08	Cuc6_3_D08	EST
G0030904	G0030904	EST
G0092652	G0092652	EST
G0117470	G0117470	EST
G0210855	G0210855	EST
H0121054	H0121054	EST
H0161551	H0161551	EST
H0168770	H0168770	EST

InterPro

Analysis Name: InterPro Annotations of cucumber unigene v3
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011009	Protein kinase-like domain	unknown	SSF56112	Protein kinase-like (PK-like)	coord: 20..112 score: 3.62
None	No IPR available	unknown	Coil	Coil	coord: 141..141 scor
None	No IPR available	GENE3D	G3DSA:1.10.510.10		coord: 13..111 score: 2.3
None	No IPR available	PANTHER	PTHR27003	FAMILY NOT NAMED	coord: 23..135 score: 1.3
None	No IPR available	PANTHER	PTHR27003:SF88	SUBFAMILY NOT NAMED	coord: 23..135 score: 1.3