CU107651 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU107651
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr1 : 8718016 .. 8719747 (-)
Sequence length338
The following sequences are available for this feature:

transcribed_cluster sequence

CGGCCGGGGGAAATTTCTCTCTCTCTCACTCTATTCTCTCGCTATAAATATTCTCCCTCTCTAGACGGTTTACCATCTCTAATTTCTAATTTATTTTCAAATTCGTAACAAAAAACTACCTGGGTTTCAATGGGAGAGGCTGCAGTACAGAAGATGGAGGGGAACAAAATGGAGTACATGGGAATGGGAGGAATAGGGTACGGATACGGGTACGGGTACGGGTACGGGATGAATACCGGGTACGGGTATGGACCGAGTGGGATTGTGGGAGAGAATTTACACGCACCGCAATTGTTTAGCGATGAGAATCCAAATGCTTGTTTCATAATGTAGGAAAT
BLAST of CU107651 vs. TrEMBL
Match: A0A0A0LSA4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G103270 PE=4 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 4.8e-08
Identity = 34/60 (56.67%), Postives = 34/60 (56.67%), Query Frame = 1

Query: 151 KMEGNKMEXXXXXXXXXXXXXXXXXXXXXXXXXXPSGIVGENLHAPQLFSDENPNACFIM 210
           KMEGNKME                          PSGIVGENLHAPQLFSDENPNACFIM
Sbjct: 272 KMEGNKMEYMGMGGIGYGYGYGYGYGMNTGYGYGPSGIVGENLHAPQLFSDENPNACFIM 331

Query: 211 270
           
Sbjct: 332 331

Query: 271 330
           
Sbjct: 392 331

BLAST of CU107651 vs. NCBI nr
Match: gi|449459106|ref|XP_004147287.1| (PREDICTED: protein FAM98B-like [Cucumis sativus])

HSP 1 Score: 67.4 bits (163), Expect = 1.8e-08
Identity = 34/60 (56.67%), Postives = 34/60 (56.67%), Query Frame = 1

Query: 151 KMEGNKMEXXXXXXXXXXXXXXXXXXXXXXXXXXPSGIVGENLHAPQLFSDENPNACFIM 210
           KMEGNKME                          PSGIVGENLHAPQLFSDENPNACFIM
Sbjct: 272 KMEGNKMEYMGMGGIGYGYGYGYGYGMNTGYGYGPSGIVGENLHAPQLFSDENPNACFIM 331

Query: 211 270
           
Sbjct: 332 331

Query: 271 330
           
Sbjct: 392 331

BLAST of CU107651 vs. NCBI nr
Match: gi|659072031|ref|XP_008463112.1| (PREDICTED: keratin, type I cytoskeletal 9-like isoform X1 [Cucumis melo])

HSP 1 Score: 60.8 bits (146), Expect = 1.7e-06
Identity = 32/60 (53.33%), Postives = 33/60 (55.00%), Query Frame = 1

Query: 151 KMEGNKMEXXXXXXXXXXXXXXXXXXXXXXXXXXPSGIVGENLHAPQLFSDENPNACFIM 210
           KMEGNKME                          P G+VGENLHAPQLFSDENPNACFIM
Sbjct: 275 KMEGNKMEYMGMGGIGYGYGYGYGLNTGYGYG--PGGLVGENLHAPQLFSDENPNACFIM 332

Query: 211 270
           
Sbjct: 335 332

Query: 271 330
           
Sbjct: 395 332

BLAST of CU107651 vs. NCBI nr
Match: gi|659072033|ref|XP_008463119.1| (PREDICTED: aspartate, glycine, lysine and serine-rich protein-like isoform X2 [Cucumis melo])

HSP 1 Score: 60.8 bits (146), Expect = 1.7e-06
Identity = 32/60 (53.33%), Postives = 33/60 (55.00%), Query Frame = 1

Query: 151 KMEGNKMEXXXXXXXXXXXXXXXXXXXXXXXXXXPSGIVGENLHAPQLFSDENPNACFIM 210
           KMEGNKME                          P G+VGENLHAPQLFSDENPNACFIM
Sbjct: 274 KMEGNKMEYMGMGGIGYGYGYGYGLNTGYGYG--PGGLVGENLHAPQLFSDENPNACFIM 331

Query: 211 270
           
Sbjct: 334 331

Query: 271 330
           
Sbjct: 394 331

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LSA4_CUCSA4.8e-0856.67Uncharacterized protein OS=Cucumis sativus GN=Csa_1G103270 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|449459106|ref|XP_004147287.1|1.8e-0856.67PREDICTED: protein FAM98B-like [Cucumis sativus][more]
gi|659072031|ref|XP_008463112.1|1.7e-0653.33PREDICTED: keratin, type I cytoskeletal 9-like isoform X1 [Cucumis melo][more]
gi|659072033|ref|XP_008463119.1|1.7e-0653.33PREDICTED: aspartate, glycine, lysine and serine-rich protein-like isoform X2 [C... [more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa1G103270Csa1G103270gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
FKNP3UI02NTBQAFKNP3UI02NTBQAEST
FKNP3UI02NTIP0FKNP3UI02NTIP0EST
FKNP3UI02NV9CDFKNP3UI02NV9CDEST
G0120766G0120766EST
H0055016H0055016EST
H0055909H0055909EST