CU106815 (transcribed_cluster) Cucumber (Chinese Long) v2

Overview
NameCU106815
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr1 : 5728953 .. 5729944 (-)
Sequence length732
Genome Viewer
Sequences
The following sequences are available for this feature:

transcribed_cluster sequence

GTTTAAAGAAAGAAAAAGAGATGCTTTGGTTGAAATAGTCTAAAGCAAAAGCATCATTACATCTGTGCAGTGTATAGTCAGGTGACATGACACTCACAAGTTGATCAAGAAATCCCCAGATAAGATTGTATCTTAAAAGCTACAAGATTCTAGCCACTGTGTGTATTAGTCAATACATGAGAGAAATTCAAGTATAATTTACATTTTTCCTTTGTTCAACGTAAATTATAGAAAATAAGTGCCATCTTTTGAAAAGCTTATGGCAGCTCAACCCGAAGAAAACGAGTTGAATATATCCTCATCCCAAACAAATGCTCCATGAAAAACCCTATATCTAGGAGTCCTCTCTGCATAAACTTCTTATGCAGACTGCTCGACTGTGGCACTGTTTCCGCTCGCTCCTCCGGCCATTTCAGCCCCTTCTGCAGTGCTAAAGTTGCCGTAGTGAGGTTGCTGTTCAAGCTCGCCCACAGTTGAAGAAGAAGGAAGAAAAAGGATGGTCAAACTTGCAAGATGGCCCAAATTTGCAGATGCCATAGCGTCTATAATACGTGCATACGTTCTGATCAGGTCTCAAGGGCAGGCCTTTATCATTGAGAGTGCAAGTCGGTAACTTAGGGTTCCGATTCTTCGGATGGTGATATTTGCAAAGAGATTTAAATTTACAATCCCCCGTCTTTAGAAAGTAACTGCATTCAGGTTGACCAGGTCGTTCAGGATATTCATCTACCT
Homology
[Close]
BLAST of CU106815 vs. Swiss-Prot
Match: C3H43_ARATH (Zinc finger CCCH domain-containing protein 43 OS=Arabidopsis thaliana GN=At3g48440 PE=2 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 9.9e-36
Identity = 62/77 (80.52%), Postives = 67/77 (87.01%), Query Frame = -3 

Query: 497 DEYPERPGQPECSYFLKTGDCKFKSLCKYHHPKNRNPKLPTCTLNDKGLPLRPDQNVCTY 556
           +E+PERP QPECSY++KTGDCKFK  CKYHHPKNR PKLP   LNDKGLPLRPDQN+CTY
Sbjct: 341 EEFPERPDQPECSYYMKTGDCKFKFNCKYHHPKNRLPKLPPYALNDKGLPLRPDQNICTY 400

Query: 557 YRRYGICKFGPSCKFDH 616
           Y RYGICKFGP+C+FDH
Sbjct: 401 YSRYGICKFGPACRFDH 417

Query: 617  676
           
Sbjct: 461  417

Query: 677  728
           
Sbjct: 521  417


HSP 2 Score: 73.2 bits (178), Expect = 4.5e-12
Identity = 30/71 (42.25%), Postives = 40/71 (56.34%), Query Frame = -3 

Query: 494 GQPECSYFLKTGDCKFKSLCKYHHPKNRNPKLPTCTLNDKGLPLRPDQNVCTYYRRYGIC 553
           G  +C Y+ +TG CK+   C+++H   ++       LN  GLPLRP +  C YY R G C
Sbjct: 160 GLIDCKYYFRTGGCKYGETCRFNHTIPKSGLASAPELNFLGLPLRPGEVECPYYMRNGSC 219

Query: 554 KFGPSCKFDHP 613
           K+G  CKF+HP
Sbjct: 220 KYGAECKFNHP 230

Query: 614  673
           
Sbjct: 280  230

Query: 674  707
           
Sbjct: 340  230


HSP 3 Score: 66.6 bits (161), Expect = 4.2e-10
Identity = 31/81 (38.27%), Postives = 44/81 (54.32%), Query Frame = -3 

Query: 497 YPERPGQPECSYFLKTGDCKFKSLCKYHHPKNRNPKLPTCTLNDKGLPLRPDQN------ 556
           YP RPG  +CS++++TG CKF S CK++HP  R  ++      D  +  + D        
Sbjct: 107 YPVRPGAEDCSFYMRTGSCKFGSSCKFNHPLARKFQI----ARDNKVREKEDDGGKLGLI 166

Query: 557 VCTYYRRYGICKFGPSCKFDH 616
            C YY R G CK+G +C+F+H
Sbjct: 167 DCKYYFRTGGCKYGETCRFNH 183

Query: 617  676
           
Sbjct: 227  183

Query: 677  722
           
Sbjct: 287  183


HSP 4 Score: 46.6 bits (109), Expect = 4.5e-04
Identity = 18/34 (52.94%), Postives = 21/34 (61.76%), Query Frame = -3 

Query: 479 PLRPDQNVCTYYRRYGICKFGPSCKFDHPFSSFF 538
           P+RP    C++Y R G CKFG SCKF+HP +  F
Sbjct: 108 PVRPGAEDCSFYMRTGSCKFGSSCKFNHPLARKF 141

Query: 539  581
           
Sbjct: 168  141


HSP 5 Score: 43.5 bits (101), Expect = 3.8e-03
Identity = 14/29 (48.28%), Postives = 20/29 (68.97%), Query Frame = -3 

Query: 632 PERPGQPECSYFLKTGDCKFKSLCKYHHP 691
           P RPG+ EC Y+++ G CK+ + CK++HP
Sbjct: 202 PLRPGEVECPYYMRNGSCKYGAECKFNHP 230

Query: 692  719
           
Sbjct: 262  230

[Close]
BLAST of CU106815 vs. Swiss-Prot
Match: C3H67_ARATH (Zinc finger CCCH domain-containing protein 67 OS=Arabidopsis thaliana GN=At5g63260 PE=2 SV=2)

HSP 1 Score: 142.9 bits (359), Expect = 4.6e-33
Identity = 59/84 (70.24%), Postives = 67/84 (79.76%), Query Frame = -3 

Query: 479 VDEYPERPGQPECSYFLKTGDCKFKSLCKYHHPKNRNPKLPTCTLNDKGLPLRPDQNVCT 538
           V+E+PERP QPEC+Y+LKTGDCKFK  CKYHHPKNR PK    + NDKGLPLRPDQ++CT
Sbjct: 328 VEEFPERPDQPECTYYLKTGDCKFKYKCKYHHPKNRLPKQAAFSFNDKGLPLRPDQSMCT 387

Query: 539 YYRRYGICKFGPSCKFDHPFSSFF 598
           +Y RYGICKFGP+C+FDH     F
Sbjct: 388 HYSRYGICKFGPACRFDHSIPPTF 411

Query: 599  658
           
Sbjct: 448  411

Query: 659  718
           
Sbjct: 508  411

Query: 719  731
           
Sbjct: 568  411


HSP 2 Score: 82.8 bits (203), Expect = 5.7e-15
Identity = 35/78 (44.87%), Postives = 42/78 (53.85%), Query Frame = -3 

Query: 494 DEYPERPGQPECSYFLKTGDCKFKSLCKYHHPKNRNPKLPTCTLNDKGLPLRPDQNVCTY 553
           DE  E P   EC Y+ +TG CK+   C++ H K  N       LN  GLP+RP +  C +
Sbjct: 143 DEDVENPKLMECKYYFRTGGCKYGESCRFSHMKEHNSPASVPELNFLGLPIRPGEKECPF 202

Query: 554 YRRYGICKFGPSCKFDHP 613
           Y R G CKFG  CKF+HP
Sbjct: 203 YMRNGSCKFGSDCKFNHP 220

Query: 614  673
           
Sbjct: 263  220

Query: 674  728
           
Sbjct: 323  220


HSP 3 Score: 68.9 bits (167), Expect = 8.5e-11
Identity = 29/76 (38.16%), Postives = 43/76 (56.58%), Query Frame = -3 

Query: 497 YPERPGQPECSYFLKTGDCKFKSLCKYHHPKNRNPKLPTCTLNDKGLPL-RPDQNVCTYY 556
           YP RP   +CS++++TG CK+ S CK++HP  R  ++    + ++   +  P    C YY
Sbjct: 98  YPVRPDSEDCSFYMRTGSCKYGSSCKFNHPVRRKLQIGRERVRERDEDVENPKLMECKYY 157

Query: 557 RRYGICKFGPSCKFDH 616
            R G CK+G SC+F H
Sbjct: 158 FRTGGCKYGESCRFSH 173

Query: 617  676
           
Sbjct: 218  173

Query: 677  722
           
Sbjct: 278  173

[Close]
BLAST of CU106815 vs. Swiss-Prot
Match: C3H57_ARATH (Zinc finger CCCH domain-containing protein 57 OS=Arabidopsis thaliana GN=ZFN3 PE=2 SV=2)

HSP 1 Score: 132.1 bits (331), Expect = 8.2e-30
Identity = 51/83 (61.45%), Postives = 63/83 (75.90%), Query Frame = -3 

Query: 473 YPERPGQPECSYFLKTGDCKFKSLCKYHHPKNRNPKLPTCTLNDKGLPLRPDQNVCTYYR 532
           +PERPGQPEC +++KTGDCKF ++CK+HHP++R    P C L+  GLPLRP + +C +Y 
Sbjct: 240 FPERPGQPECQFYMKTGDCKFGTVCKFHHPRDRQTPPPDCVLSSVGLPLRPGEPLCVFYS 299

Query: 533 RYGICKFGPSCKFDHPFSSFFFN 592
           RYGICKFGPSCKFDHP   F +N
Sbjct: 300 RYGICKFGPSCKFDHPMRVFTYN 322

Query: 593  652
           
Sbjct: 360  322

Query: 653  712
           
Sbjct: 420  322

Query: 713  722
           
Sbjct: 480  322


HSP 2 Score: 99.8 bits (247), Expect = 4.5e-20
Identity = 41/77 (53.25%), Postives = 54/77 (70.13%), Query Frame = -3 

Query: 494 EYPERPGQPECSYFLKTGDCKFKSLCKYHHPKNRNPKLPTCTLNDKGLPLRPDQNVCTYY 553
           EYPER GQPEC ++LKTG CKF   CK+HHP+N+     + ++N    PLRP+++ C+Y+
Sbjct: 83  EYPERIGQPECEFYLKTGTCKFGVTCKFHHPRNKAGIDGSVSVNVLSYPLRPNEDDCSYF 142

Query: 554 RRYGICKFGPSCKFDHP 613
            R G CKFG +CKF+HP
Sbjct: 143 LRIGQCKFGGTCKFNHP 159

Query: 614  673
           
Sbjct: 203  159

Query: 674  725
           
Sbjct: 263  159


HSP 3 Score: 82.0 bits (201), Expect = 9.7e-15
Identity = 37/77 (48.05%), Postives = 49/77 (63.64%), Query Frame = -3 

Query: 494 YPERPGQPECSYFLKTGDCKFKSLCKYHHPKNRNPKLPTCTLNDKG-LPLRPDQNVCTYY 553
           YPER G+P+C+Y+++TG C+F S C+++HP +R  KL   T   KG  P R  Q  C +Y
Sbjct: 39  YPERHGEPDCAYYIRTGLCRFGSTCRFNHPHDR--KLVIATARIKGEYPERIGQPECEFY 98

Query: 554 RRYGICKFGPSCKFDHP 613
            + G CKFG +CKF HP
Sbjct: 99  LKTGTCKFGVTCKFHHP 113

Query: 614  673
           
Sbjct: 159  113

Query: 674  722
           
Sbjct: 219  113


HSP 4 Score: 50.4 bits (119), Expect = 3.1e-05
Identity = 18/37 (48.65%), Postives = 24/37 (64.86%), Query Frame = -3 

Query: 611 YPERPGQPECSYFLKTGDCKFKSLCKYHHPKNRNPKL 670
           YP RP + +CSYFL+ G CKF   CK++HP+ ++  L
Sbjct: 130 YPLRPNEDDCSYFLRIGQCKFGGTCKFNHPQTQSTNL 166

Query: 671  722
           
Sbjct: 190  166

[Close]
BLAST of CU106815 vs. Swiss-Prot
Match: C3H66_ORYSJ (Zinc finger CCCH domain-containing protein 66 OS=Oryza sativa subsp. japonica GN=Os12g0405100 PE=2 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.4e-29
Identity = 51/82 (62.20%), Postives = 61/82 (74.39%), Query Frame = -3 

Query: 476 YPERPGQPECSYFLKTGDCKFKSLCKYHHPKNRNPKLPTCTLNDKGLPLRPDQNVCTYYR 535
           +PERP QPEC +++KTGDCKF ++CK+HHPK R    P C LN  GLPLRP + VCT+Y 
Sbjct: 315 FPERPDQPECQFYMKTGDCKFGAVCKFHHPKERLVPAPNCALNSLGLPLRPGEPVCTFYS 374

Query: 536 RYGICKFGPSCKFDHPFSSFFF 595
           RYGICKFGP+CKFDHP  +  +
Sbjct: 375 RYGICKFGPNCKFDHPMGTLMY 396

Query: 596  655
           
Sbjct: 435  396

Query: 656  715
           
Sbjct: 495  396

Query: 716  722
           
Sbjct: 555  396


HSP 2 Score: 99.0 bits (245), Expect = 7.7e-20
Identity = 41/77 (53.25%), Postives = 48/77 (62.34%), Query Frame = -3 

Query: 494 EYPERPGQPECSYFLKTGDCKFKSLCKYHHPKNRNPKLPTCTLNDKGLPLRPDQNVCTYY 553
           EYP R GQPEC Y+LKTG CKF + CK+HHP+ +        LN  G P+RP++  C YY
Sbjct: 107 EYPYRVGQPECQYYLKTGTCKFGATCKFHHPREKAALANRVQLNVLGYPMRPNEKECAYY 166

Query: 554 RRYGICKFGPSCKFDHP 613
            R G CKF  +CKF HP
Sbjct: 167 LRTGQCKFASTCKFHHP 183

Query: 614  673
           
Sbjct: 227  183

Query: 674  725
           
Sbjct: 287  183


HSP 3 Score: 86.3 bits (212), Expect = 5.1e-16
Identity = 36/76 (47.37%), Postives = 47/76 (61.84%), Query Frame = -3 

Query: 494 YPERPGQPECSYFLKTGDCKFKSLCKYHHPKNRNPKLPTCTLNDKGLPLRPDQNVCTYYR 553
           YPER G+P+CSY+++TG C+F   CK++HP NR   +    +N +  P R  Q  C YY 
Sbjct: 63  YPERIGEPDCSYYMRTGLCRFGMTCKFNHPPNRKLAVAAARMNGE-YPYRVGQPECQYYL 122

Query: 554 RYGICKFGPSCKFDHP 613
           + G CKFG +CKF HP
Sbjct: 123 KTGTCKFGATCKFHHP 137

Query: 614  673
           
Sbjct: 183  137

Query: 674  722
           
Sbjct: 243  137


HSP 4 Score: 55.8 bits (133), Expect = 7.4e-07
Identity = 20/34 (58.82%), Postives = 24/34 (70.59%), Query Frame = -3 

Query: 620 YPERPGQPECSYFLKTGDCKFKSLCKYHHPKNRN 679
           YP RP + EC+Y+L+TG CKF S CK+HHP+  N
Sbjct: 154 YPMRPNEKECAYYLRTGQCKFASTCKFHHPQPSN 187

Query: 680  722
           
Sbjct: 214  187

[Close]
BLAST of CU106815 vs. Swiss-Prot
Match: C3H33_ARATH (Zinc finger CCCH domain-containing protein 33 OS=Arabidopsis thaliana GN=ZFN1 PE=1 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 5.3e-29
Identity = 50/83 (60.24%), Postives = 63/83 (75.90%), Query Frame = -3 

Query: 473 YPERPGQPECSYFLKTGDCKFKSLCKYHHPKNRNPKLPTCTLNDKGLPLRPDQNVCTYYR 532
           +PERPGQPEC +++KTGDCKF ++CK+HHP++R    P C L+  GLPLRP + +C +Y 
Sbjct: 271 FPERPGQPECQFYMKTGDCKFGTVCKFHHPRDRQAPPPDCLLSSIGLPLRPGEPLCVFYT 330

Query: 533 RYGICKFGPSCKFDHPFSSFFFN 592
           RYGICKFGPSCKFDHP   F ++
Sbjct: 331 RYGICKFGPSCKFDHPMRVFTYD 353

Query: 593  652
           
Sbjct: 391  353

Query: 653  712
           
Sbjct: 451  353

Query: 713  722
           
Sbjct: 511  353


HSP 2 Score: 99.8 bits (247), Expect = 4.5e-20
Identity = 43/77 (55.84%), Postives = 51/77 (66.23%), Query Frame = -3 

Query: 494 EYPERPGQPECSYFLKTGDCKFKSLCKYHHPKNRNPKLPTCTLNDKGLPLRPDQNVCTYY 553
           EYPER GQPEC Y+LKTG CKF   CK+HHP+N+       +LN  G PLR ++  C Y+
Sbjct: 81  EYPERIGQPECEYYLKTGTCKFGVTCKFHHPRNKAGIAGRVSLNMLGYPLRSNEVDCAYF 140

Query: 554 RRYGICKFGPSCKFDHP 613
            R G CKFG +CKF+HP
Sbjct: 141 LRTGHCKFGGTCKFNHP 157

Query: 614  673
           
Sbjct: 201  157

Query: 674  725
           
Sbjct: 261  157


HSP 3 Score: 88.2 bits (217), Expect = 1.4e-16
Identity = 36/76 (47.37%), Postives = 50/76 (65.79%), Query Frame = -3 

Query: 494 YPERPGQPECSYFLKTGDCKFKSLCKYHHPKNRNPKLPTCTLNDKGLPLRPDQNVCTYYR 553
           YPERPG+P+CSY+++TG C+F S C+++HP++R   + T  +  +  P R  Q  C YY 
Sbjct: 37  YPERPGEPDCSYYIRTGLCRFGSTCRFNHPRDRELVIATARMRGE-YPERIGQPECEYYL 96

Query: 554 RYGICKFGPSCKFDHP 613
           + G CKFG +CKF HP
Sbjct: 97  KTGTCKFGVTCKFHHP 111

Query: 614  673
           
Sbjct: 157  111

Query: 674  722
           
Sbjct: 217  111


HSP 4 Score: 47.0 bits (110), Expect = 3.5e-04
Identity = 18/48 (37.50%), Postives = 26/48 (54.17%), Query Frame = -3 

Query: 578 YPERPGQPECSYFLKTGDCKFKSLCKYHHPKNRNPKLPTCTLNDKGLP 637
           YP R  + +C+YFL+TG CKF   CK++HP+ +   +   T   +  P
Sbjct: 128 YPLRSNEVDCAYFLRTGHCKFGGTCKFNHPQPQPTNMMVPTSGQQSYP 175

Query: 638  697
           
Sbjct: 188  175

Query: 698  722
           
Sbjct: 248  175


HSP 5 Score: 44.3 bits (103), Expect = 2.2e-03
Identity = 16/36 (44.44%), Postives = 22/36 (61.11%), Query Frame = -3 

Query: 494 TLNDKGLPLRPDQNVCTYYRRYGICKFGPSCKFDHP 553
           T+     P RP +  C+YY R G+C+FG +C+F+HP
Sbjct: 31  TMETGSYPERPGEPDCSYYIRTGLCRFGSTCRFNHP 66

Query: 554  602
           
Sbjct: 91   66

[Close]
BLAST of CU106815 vs. TrEMBL
Match: A0A0A0LU93_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G050060 PE=4 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 1.4e-44
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = -3 

Query: 491 VDEYPERPGQPECSYFLKTGDCKFKSLCKYHHPKNRNPKLPTCTLNDKGLPLRPDQNVCT 550
           VDEYPERPGQPECSYFLKTGDCKFKSLCKYHHPKNRNPKLPTCTLNDKGLPLRPDQNVCT
Sbjct: 352 VDEYPERPGQPECSYFLKTGDCKFKSLCKYHHPKNRNPKLPTCTLNDKGLPLRPDQNVCT 411

Query: 551 YYRRYGICKFGPSCKFDHPF 610
           YYRRYGICKFGPSCKFDHPF
Sbjct: 412 YYRRYGICKFGPSCKFDHPF 431

Query: 611  670
           
Sbjct: 472  431

Query: 671  730
           
Sbjct: 532  431

[Close]
BLAST of CU106815 vs. TrEMBL
Match: A0A0A0LU93_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G050060 PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 7.5e-14
Identity = 35/78 (44.87%), Postives = 49/78 (62.82%), Query Frame = -3 

Query: 494 DEYPERPGQPECSYFLKTGDCKFKSLCKYHHPKNRNPKLPTCTLNDKGLPLRPDQNVCTY 553
           D+      + EC ++L+TG CKF + C+Y+H + R    P   LN  GLP+RPD+  C Y
Sbjct: 181 DDSTGTANRTECKFYLRTGGCKFGNACRYNHTRPRALTSPILELNFLGLPIRPDEKECPY 240

Query: 554 YRRYGICKFGPSCKFDHP 613
           Y R G CK+G +CKF+HP
Sbjct: 241 YMRTGSCKYGANCKFNHP 258

Query: 614  673
           
Sbjct: 301  258

Query: 674  728
           
Sbjct: 361  258


HSP 2 Score: 67.0 bits (162), Expect = 3.6e-08
Identity = 28/78 (35.90%), Postives = 47/78 (60.26%), Query Frame = -3 

Query: 497 DEYPERPGQPECSYFLKTGDCKFKSLCKYHHP-KNRNPKLPTCTLNDKGLPLRPDQNVCT 556
           ++YP RP   +C+++LKTG CKF S CK++HP + +N  +      +       ++  C 
Sbjct: 134 NQYPVRPDAEDCAFYLKTGTCKFGSFCKFNHPVRKKNQVVSEKLKYEDDSTGTANRTECK 193

Query: 557 YYRRYGICKFGPSCKFDH 616
           +Y R G CKFG +C+++H
Sbjct: 194 FYLRTGGCKFGNACRYNH 211

Query: 617  676
           
Sbjct: 254  211

Query: 677  728
           
Sbjct: 314  211


HSP 3 Score: 54.3 bits (129), Expect = 2.4e-04
Identity = 28/43 (65.12%), Postives = 28/43 (65.12%), Query Frame = -1 

Query: 364 FLPSSSTVGELEQQPHYGNFSTXXXXXXXXXXXXXXXTVEQSA 423
           FLPSSSTVGELEQQPHYGNFST               TVEQSA
Sbjct: 431 FLPSSSTVGELEQQPHYGNFSTAEGAEMAGGASGNSATVEQSA 473

Query: 424  483
           
Sbjct: 491  473

Query: 484  493
           
Sbjct: 551  473


HSP 4 Score: 185.7 bits (470), Expect = 6.9e-44
Identity = 79/80 (98.75%), Postives = 79/80 (98.75%), Query Frame = -3 

Query: 491 VDEYPERPGQPECSYFLKTGDCKFKSLCKYHHPKNRNPKLPTCTLNDKGLPLRPDQNVCT 550
           VDEYPERPGQPECSYFLKTGDCKFKSLCKYHHPKNRNPKLPTCTLNDKGLPLRPDQNVCT
Sbjct: 354 VDEYPERPGQPECSYFLKTGDCKFKSLCKYHHPKNRNPKLPTCTLNDKGLPLRPDQNVCT 413

Query: 551 YYRRYGICKFGPSCKFDHPF 610
           YY RYGICKFGPSCKFDHPF
Sbjct: 414 YYSRYGICKFGPSCKFDHPF 433

Query: 611  670
           
Sbjct: 474  433

Query: 671  730
           
Sbjct: 534  433

[Close]
BLAST of CU106815 vs. TrEMBL
Match: E5GBX3_CUCME (Nucleic acid binding protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 3.3e-14
Identity = 35/78 (44.87%), Postives = 50/78 (64.10%), Query Frame = -3 

Query: 494 DEYPERPGQPECSYFLKTGDCKFKSLCKYHHPKNRNPKLPTCTLNDKGLPLRPDQNVCTY 553
           D+      + EC ++L+TG CKF + C+Y+H ++R    P   LN  GLP+RPD+  C Y
Sbjct: 183 DDSAGTANKTECKFYLRTGGCKFGNACRYNHTRSRALTSPILELNFLGLPIRPDEKECPY 242

Query: 554 YRRYGICKFGPSCKFDHP 613
           Y R G CK+G +CKF+HP
Sbjct: 243 YMRTGSCKYGANCKFNHP 260

Query: 614  673
           
Sbjct: 303  260

Query: 674  728
           
Sbjct: 363  260


HSP 2 Score: 68.2 bits (165), Expect = 1.6e-08
Identity = 29/78 (37.18%), Postives = 47/78 (60.26%), Query Frame = -3 

Query: 497 DEYPERPGQPECSYFLKTGDCKFKSLCKYHHP-KNRNPKLPTCTLNDKGLPLRPDQNVCT 556
           ++YP RP   +C+++LKTG CKF S CK++HP + +N  +      D       ++  C 
Sbjct: 136 NQYPVRPEAEDCAFYLKTGTCKFGSFCKFNHPVRKKNQVVSEKLKYDDDSAGTANKTECK 195

Query: 557 YYRRYGICKFGPSCKFDH 616
           +Y R G CKFG +C+++H
Sbjct: 196 FYLRTGGCKFGNACRYNH 213

Query: 617  676
           
Sbjct: 256  213

Query: 677  728
           
Sbjct: 316  213


HSP 3 Score: 51.2 bits (121), Expect = 2.0e-03
Identity = 26/43 (60.47%), Postives = 27/43 (62.79%), Query Frame = -1 

Query: 364 FLPSSSTVGELEQQPHYGNFSTXXXXXXXXXXXXXXXTVEQSA 423
           FLP+SSTVGELEQQPHYGNFS                TVEQSA
Sbjct: 433 FLPTSSTVGELEQQPHYGNFSAAEGAEMAGGASGNSATVEQSA 475

Query: 424  483
           
Sbjct: 493  475

Query: 484  493
           
Sbjct: 553  475


HSP 4 Score: 162.5 bits (410), Expect = 6.3e-37
Identity = 68/82 (82.93%), Postives = 75/82 (91.46%), Query Frame = -3 

Query: 485 VDEYPERPGQPECSYFLKTGDCKFKSLCKYHHPKNRNPKLPTCTLNDKGLPLRPDQNVCT 544
           V+E+PERPG+PECSYFLKTGDCKFKS CK+HHPKNR  +LP C L+DKGLPLRPDQNVCT
Sbjct: 456 VEEFPERPGEPECSYFLKTGDCKFKSNCKFHHPKNRIARLPLCNLSDKGLPLRPDQNVCT 515

Query: 545 YYRRYGICKFGPSCKFDHPFSS 604
           YYRRYGICKFGP+CKFDHP  S
Sbjct: 516 YYRRYGICKFGPACKFDHPAPS 537

Query: 605  664
           
Sbjct: 576  537

Query: 665  724
           
Sbjct: 636  537

Query: 725  731
           
Sbjct: 696  537

[Close]
BLAST of CU106815 vs. TrEMBL
Match: A0A0B2PEA2_GLYSO (Zinc finger CCCH domain-containing protein 43 OS=Glycine soja GN=glysoja_038708 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 2.6e-14
Identity = 35/78 (44.87%), Postives = 49/78 (62.82%), Query Frame = -3 

Query: 494 DEYPERPGQPECSYFLKTGDCKFKSLCKYHHPKNRNPKLPTCTLNDKGLPLRPDQNVCTY 553
           +E  ER GQ EC Y+L++G CKF   CK++H + ++       LN  GLP+R  +  C Y
Sbjct: 275 EEQAERSGQMECKYYLRSGGCKFGKACKFNHTRGKSSSASAAELNFLGLPIRVGEKECLY 334

Query: 554 YRRYGICKFGPSCKFDHP 613
           Y R G CKFG +C+F+HP
Sbjct: 335 YMRTGSCKFGANCRFNHP 352

Query: 614  673
           
Sbjct: 395  352

Query: 674  728
           
Sbjct: 455  352


HSP 2 Score: 68.9 bits (167), Expect = 9.4e-09
Identity = 32/77 (41.56%), Postives = 44/77 (57.14%), Query Frame = -3 

Query: 497 EYPERPGQPECSYFLKTGDCKFKSLCKYHHPKNRNPKLPTCTLNDKGLPL-RPDQNVCTY 556
           +YP RP   +C+++LKTG CKF   CK++HP  R  +       ++     R  Q  C Y
Sbjct: 229 QYPLRPEAEDCAFYLKTGTCKFGFNCKFNHPLRRKNQAKKENAGEREEQAERSGQMECKY 288

Query: 557 YRRYGICKFGPSCKFDH 616
           Y R G CKFG +CKF+H
Sbjct: 289 YLRSGGCKFGKACKFNH 305

Query: 617  676
           
Sbjct: 349  305

Query: 677  725
           
Sbjct: 409  305


HSP 3 Score: 162.5 bits (410), Expect = 6.3e-37
Identity = 68/82 (82.93%), Postives = 75/82 (91.46%), Query Frame = -3 

Query: 485 VDEYPERPGQPECSYFLKTGDCKFKSLCKYHHPKNRNPKLPTCTLNDKGLPLRPDQNVCT 544
           V+E+PERPG+PECSYFLKTGDCKFKS CK+HHPKNR  +LP C L+DKGLPLRPDQNVCT
Sbjct: 456 VEEFPERPGEPECSYFLKTGDCKFKSNCKFHHPKNRIARLPLCNLSDKGLPLRPDQNVCT 515

Query: 545 YYRRYGICKFGPSCKFDHPFSS 604
           YYRRYGICKFGP+CKFDHP  S
Sbjct: 516 YYRRYGICKFGPACKFDHPAPS 537

Query: 605  664
           
Sbjct: 576  537

Query: 665  724
           
Sbjct: 636  537

Query: 725  731
           
Sbjct: 696  537

[Close]
BLAST of CU106815 vs. TrEMBL
Match: I1JXF6_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_04G192100 PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 3.3e-14
Identity = 35/78 (44.87%), Postives = 49/78 (62.82%), Query Frame = -3 

Query: 494 DEYPERPGQPECSYFLKTGDCKFKSLCKYHHPKNRNPKLPTCTLNDKGLPLRPDQNVCTY 553
           +E  ER GQ EC Y+L++G CKF   CK++H + ++       LN  GLP+R  +  C Y
Sbjct: 275 EEQAERSGQMECKYYLRSGGCKFGKACKFNHTRGKSSSASATELNFLGLPIRVGEKECLY 334

Query: 554 YRRYGICKFGPSCKFDHP 613
           Y R G CKFG +C+F+HP
Sbjct: 335 YMRTGSCKFGANCRFNHP 352

Query: 614  673
           
Sbjct: 395  352

Query: 674  728
           
Sbjct: 455  352


HSP 2 Score: 68.9 bits (167), Expect = 9.4e-09
Identity = 32/77 (41.56%), Postives = 44/77 (57.14%), Query Frame = -3 

Query: 497 EYPERPGQPECSYFLKTGDCKFKSLCKYHHPKNRNPKLPTCTLNDKGLPL-RPDQNVCTY 556
           +YP RP   +C+++LKTG CKF   CK++HP  R  +       ++     R  Q  C Y
Sbjct: 229 QYPLRPEAEDCAFYLKTGTCKFGFNCKFNHPLRRKNQAKKENAGEREEQAERSGQMECKY 288

Query: 557 YRRYGICKFGPSCKFDH 616
           Y R G CKFG +CKF+H
Sbjct: 289 YLRSGGCKFGKACKFNH 305

Query: 617  676
           
Sbjct: 349  305

Query: 677  725
           
Sbjct: 409  305


HSP 3 Score: 161.4 bits (407), Expect = 1.4e-36
Identity = 64/79 (81.01%), Postives = 74/79 (93.67%), Query Frame = -3 

Query: 494 VDEYPERPGQPECSYFLKTGDCKFKSLCKYHHPKNRNPKLPTCTLNDKGLPLRPDQNVCT 553
           ++++PERPGQPECSYFLKTGDCKF++ CKYHHPKNR PK P CTL+DKGLPLRPDQN+CT
Sbjct: 359 IEDFPERPGQPECSYFLKTGDCKFRAACKYHHPKNRIPKSPPCTLSDKGLPLRPDQNICT 418

Query: 554 YYRRYGICKFGPSCKFDHP 613
           +Y RYGICKFGP+CKFDHP
Sbjct: 419 HYNRYGICKFGPACKFDHP 437

Query: 614  673
           
Sbjct: 479  437

Query: 674  731
           
Sbjct: 539  437

[Close]
BLAST of CU106815 vs. NCBI nr
Match: gi|449469596|ref|XP_004152505.1| (PREDICTED: zinc finger CCCH domain-containing protein 43 isoform X2 [Cucumis sativus])

HSP 1 Score: 190.3 bits (482), Expect = 4.0e-45
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = -3 

Query: 491 VDEYPERPGQPECSYFLKTGDCKFKSLCKYHHPKNRNPKLPTCTLNDKGLPLRPDQNVCT 550
           VDEYPERPGQPECSYFLKTGDCKFKSLCKYHHPKNRNPKLPTCTLNDKGLPLRPDQNVCT
Sbjct: 352 VDEYPERPGQPECSYFLKTGDCKFKSLCKYHHPKNRNPKLPTCTLNDKGLPLRPDQNVCT 411

Query: 551 YYRRYGICKFGPSCKFDHPF 610
           YYRRYGICKFGPSCKFDHPF
Sbjct: 412 YYRRYGICKFGPSCKFDHPF 431

Query: 611  670
           
Sbjct: 472  431

Query: 671  730
           
Sbjct: 532  431

[Close]
BLAST of CU106815 vs. NCBI nr
Match: gi|778657993|ref|XP_011651926.1| (PREDICTED: zinc finger CCCH domain-containing protein 43 isoform X1 [Cucumis sativus])

HSP 1 Score: 190.3 bits (482), Expect = 4.0e-45
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = -3 

Query: 491 VDEYPERPGQPECSYFLKTGDCKFKSLCKYHHPKNRNPKLPTCTLNDKGLPLRPDQNVCT 550
           VDEYPERPGQPECSYFLKTGDCKFKSLCKYHHPKNRNPKLPTCTLNDKGLPLRPDQNVCT
Sbjct: 356 VDEYPERPGQPECSYFLKTGDCKFKSLCKYHHPKNRNPKLPTCTLNDKGLPLRPDQNVCT 415

Query: 551 YYRRYGICKFGPSCKFDHPF 610
           YYRRYGICKFGPSCKFDHPF
Sbjct: 416 YYRRYGICKFGPSCKFDHPF 435

Query: 611  670
           
Sbjct: 476  435

Query: 671  730
           
Sbjct: 536  435

[Close]
BLAST of CU106815 vs. NCBI nr
Match: gi|778657996|ref|XP_011651936.1| (PREDICTED: zinc finger CCCH domain-containing protein 43 isoform X3 [Cucumis sativus])

HSP 1 Score: 190.3 bits (482), Expect = 4.0e-45
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = -3 

Query: 491 VDEYPERPGQPECSYFLKTGDCKFKSLCKYHHPKNRNPKLPTCTLNDKGLPLRPDQNVCT 550
           VDEYPERPGQPECSYFLKTGDCKFKSLCKYHHPKNRNPKLPTCTLNDKGLPLRPDQNVCT
Sbjct: 330 VDEYPERPGQPECSYFLKTGDCKFKSLCKYHHPKNRNPKLPTCTLNDKGLPLRPDQNVCT 389

Query: 551 YYRRYGICKFGPSCKFDHPF 610
           YYRRYGICKFGPSCKFDHPF
Sbjct: 390 YYRRYGICKFGPSCKFDHPF 409

Query: 611  670
           
Sbjct: 450  409

Query: 671  730
           
Sbjct: 510  409

[Close]
BLAST of CU106815 vs. NCBI nr
Match: gi|659067397|ref|XP_008439243.1| (PREDICTED: zinc finger CCCH domain-containing protein 43 [Cucumis melo])

HSP 1 Score: 188.0 bits (476), Expect = 2.0e-44
Identity = 79/80 (98.75%), Postives = 79/80 (98.75%), Query Frame = -3 

Query: 491 VDEYPERPGQPECSYFLKTGDCKFKSLCKYHHPKNRNPKLPTCTLNDKGLPLRPDQNVCT 550
           VDEYPERPGQPECSYFLKTGDCKFKSLCKYHHPKNRNPKLPTCTLNDKGLPLRPDQNVCT
Sbjct: 354 VDEYPERPGQPECSYFLKTGDCKFKSLCKYHHPKNRNPKLPTCTLNDKGLPLRPDQNVCT 413

Query: 551 YYRRYGICKFGPSCKFDHPF 610
           YY RYGICKFGPSCKFDHPF
Sbjct: 414 YYSRYGICKFGPSCKFDHPF 433

Query: 611  670
           
Sbjct: 474  433

Query: 671  730
           
Sbjct: 534  433

[Close]
BLAST of CU106815 vs. NCBI nr
Match: gi|356507323|ref|XP_003522417.1| (PREDICTED: zinc finger CCCH domain-containing protein 43 [Glycine max])

HSP 1 Score: 164.9 bits (416), Expect = 1.8e-37
Identity = 68/82 (82.93%), Postives = 75/82 (91.46%), Query Frame = -3 

Query: 485 VDEYPERPGQPECSYFLKTGDCKFKSLCKYHHPKNRNPKLPTCTLNDKGLPLRPDQNVCT 544
           V+E+PERPG+PECSYFLKTGDCKFKS CK+HHPKNR  +LP C L+DKGLPLRPDQNVCT
Sbjct: 456 VEEFPERPGEPECSYFLKTGDCKFKSNCKFHHPKNRIARLPLCNLSDKGLPLRPDQNVCT 515

Query: 545 YYRRYGICKFGPSCKFDHPFSS 604
           YYRRYGICKFGP+CKFDHP  S
Sbjct: 516 YYRRYGICKFGPACKFDHPAPS 537

Query: 605  664
           
Sbjct: 576  537

Query: 665  724
           
Sbjct: 636  537

Query: 725  731
           
Sbjct: 696  537

The following BLAST results are available for this feature:
BLAST of CU106815 vs. Swiss-Prot
Match NameE-valueIdentityDescription
C3H43_ARATH9.9e-3680.52Zinc finger CCCH domain-containing protein 43 OS=Arabidopsis thaliana GN=At3g484... [more]
C3H67_ARATH4.6e-3370.24Zinc finger CCCH domain-containing protein 67 OS=Arabidopsis thaliana GN=At5g632... [more]
C3H57_ARATH8.2e-3061.45Zinc finger CCCH domain-containing protein 57 OS=Arabidopsis thaliana GN=ZFN3 PE... [more]
C3H66_ORYSJ1.4e-2962.20Zinc finger CCCH domain-containing protein 66 OS=Oryza sativa subsp. japonica GN... [more]
C3H33_ARATH5.3e-2960.24Zinc finger CCCH domain-containing protein 33 OS=Arabidopsis thaliana GN=ZFN1 PE... [more]
BLAST of CU106815 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LU93_CUCSA1.4e-44100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G050060 PE=4 SV=1[more]
A0A0A0LU93_CUCSA7.5e-1444.87Uncharacterized protein OS=Cucumis sativus GN=Csa_1G050060 PE=4 SV=1[more]
E5GBX3_CUCME3.3e-1444.87Nucleic acid binding protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
A0A0B2PEA2_GLYSO2.6e-1444.87Zinc finger CCCH domain-containing protein 43 OS=Glycine soja GN=glysoja_038708 ... [more]
I1JXF6_SOYBN3.3e-1444.87Uncharacterized protein OS=Glycine max GN=GLYMA_04G192100 PE=4 SV=1[more]
BLAST of CU106815 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449469596|ref|XP_004152505.1|4.0e-45100.00PREDICTED: zinc finger CCCH domain-containing protein 43 isoform X2 [Cucumis sat... [more]
gi|778657993|ref|XP_011651926.1|4.0e-45100.00PREDICTED: zinc finger CCCH domain-containing protein 43 isoform X1 [Cucumis sat... [more]
gi|778657996|ref|XP_011651936.1|4.0e-45100.00PREDICTED: zinc finger CCCH domain-containing protein 43 isoform X3 [Cucumis sat... [more]
gi|659067397|ref|XP_008439243.1|2.0e-4498.75PREDICTED: zinc finger CCCH domain-containing protein 43 [Cucumis melo][more]
gi|356507323|ref|XP_003522417.1|1.8e-3782.93PREDICTED: zinc finger CCCH domain-containing protein 43 [Glycine max][more]
Annotated Terms
The following terms have been associated with this transcribed_cluster:
Vocabulary: INTERPRO
TermDefinition
IPR000571Znf_CCCH
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO Annotation
GO Assignments
This transcribed_cluster is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0046872 metal ion binding
Relationships

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa1G050060Csa1G050060gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
FKNP3UI02KH6KKFKNP3UI02KH6KKEST
FKNP3UI02NBMN1FKNP3UI02NBMN1EST
FKNP3UI02NH85OFKNP3UI02NH85OEST
FKNP3UI02NQZBQFKNP3UI02NQZBQEST
G0028710G0028710EST
G0032620G0032620EST
G0047087G0047087EST
G0060773G0060773EST
G0063247G0063247EST
G0096476G0096476EST
G0104370G0104370EST
G0108956G0108956EST
G0113115G0113115EST
G0142781G0142781EST
G0165115G0165115EST
G0185346G0185346EST
H0017020H0017020EST
H0039969H0039969EST
H0067811H0067811EST
H0074437H0074437EST
H0093108H0093108EST
H0101513H0101513EST
H0121417H0121417EST
H0135168H0135168EST
H0142317H0142317EST
H0159659H0159659EST
H0179225H0179225EST
H0188145H0188145EST


InterPro
Analysis Name: InterPro Annotations of cucumber unigene v3
Date Performed: 2016-11-16
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000571Zinc finger, CCCH-typePFAMPF00642zf-CCCHcoord: 10..35
score: 1.
IPR000571Zinc finger, CCCH-typeSMARTSM00356c3hfinal6coord: 8..35
score: 0.
IPR000571Zinc finger, CCCH-typePROFILEPS50103ZF_C3H1coord: 8..36
score: 13
IPR000571Zinc finger, CCCH-typeunknownSSF90229CCCH zinc fingercoord: 12..36
score: 3.9
NoneNo IPR availablePANTHERPTHR12506PROTEIN PHOSPHATASE RELATEDcoord: 2..54
score: 6.9
NoneNo IPR availablePANTHERPTHR12506:SF20ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 43coord: 2..54
score: 6.9