CU106516 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU106516
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr2 : 20225426 .. 20226039 (-)
Sequence length615
The following sequences are available for this feature:

transcribed_cluster sequence

TTTCAGCAGTAGTAAAAGGTACGGACTCCAGAACAGCTTCTGATGGTGAAATGGACTCCTTCTCGGTTAGAATAGGAGAATCAGCCATCGCCGACAAAGATTCAACAGTAGGCAGCGGGGGATTTTCTTTCCTGAGTGCTAGATGGTGGGGGGTCCGCAAGGGTAGAACCATCGGGATCCGATCGTCCATCAAAACTTAAGGTGTAGAAATAAAATGAAACAAAGTTGGAAAGGGAAGGAGAGCGTTAAAGAATTTGCGGACTGCAGAGGTCTATGGCAGGGGAAAAGTAGTGCAGAAAATGAAAACGAAGAGAGTGGGGAAATCAGTGCCGACCGGAATGATGCAAAGAAGTGGAAGCGGGAGCGTCGGTGGATAACATGATAAGGATCGGTTTTGAACGGAAAACAGATAGGTGGGGAATCGAAGGCATCTGGCTTGGAAGAAAAATCATGGTACGAGGAGAGGACAGGAGAAGAGAAGAAGAGAGGAAGAGAATAAGAGGATTGGGGCTATGGCTCCATCTGGCCGGGGGATGAAGACGCCTCTTCCGCTTCAAATCCTCACCCAGAGGCTGCCGCTTATTGAAAAATAAACTTTTGAGACAACCAGGGTCC
BLAST of CU106516 vs. TrEMBL
Match: A0A0A0LPX5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G386170 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 3.5e-25
Identity = 70/120 (58.33%), Postives = 74/120 (61.67%), Query Frame = 3

Query: 231 KGRRALKNLRTAEVYGRGKVVQKMKTKRVGKSVPTGMMQRSGSGSVGG*HDKDRF*TENR 290
           KG+ ++K    AEVYGRGKVVQKMKTKRVGKSVPTG+MQRSGSGS               
Sbjct: 6   KGKESVKEFAAAEVYGRGKVVQKMKTKRVGKSVPTGIMQRSGSGS--------------- 65

Query: 291 *VGNRRHLAWKKNHGTXXXXXXXXXXXXXXXIGAMAPSGRGMKTPLPLQILTQRLPLIEK 350
                      KNHGT               IGAMAPSGRGMKTPLPLQILTQRLPLIEK
Sbjct: 66  -----------KNHGTRRGQEKRRREEENKRIGAMAPSGRGMKTPLPLQILTQRLPLIEK 99

Query: 351 410
           
Sbjct: 126 99

Query: 411 470
           
Sbjct: 186 99

Query: 471 530
           
Sbjct: 246 99

Query: 531 590
           
Sbjct: 306 99

BLAST of CU106516 vs. TrEMBL
Match: A0A0A0LPX5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G386170 PE=4 SV=1)

HSP 1 Score: 36.6 bits (83), Expect = 4.4e+01
Identity = 17/24 (70.83%), Postives = 18/24 (75.00%), Query Frame = 2

Query: 215 MKQSWKGKESVKEFADCRGLWQGK 274
           MKQSWKGKESVKEFA      +GK
Sbjct: 1   MKQSWKGKESVKEFAAAEVYGRGK 24

Query: 275 287
           
Sbjct: 61  24


HSP 2 Score: 101.7 bits (252), Expect = 1.1e-18
Identity = 52/63 (82.54%), Postives = 56/63 (88.89%), Query Frame = -3

Query: 2   MDDRIPMVLPLRTPHHLALRKENPPLPTVESLSAMADSPILTEKESISPSEAVLESVPFT 61
           MDDRIPMVLPL  P   + ++ENPP PTVESLSA+ADSPILTEKESISPSEAVLESVPFT
Sbjct: 1   MDDRIPMVLPLADPPPSSTQEENPPPPTVESLSAVADSPILTEKESISPSEAVLESVPFT 60

Query: 62  TAE 121
           TAE
Sbjct: 61  TAE 63

Query: 122 181
           
Sbjct: 121 63

Query: 182 191
           
Sbjct: 181 63

BLAST of CU106516 vs. NCBI nr
Match: gi|700207930|gb|KGN63049.1| (hypothetical protein Csa_2G386170 [Cucumis sativus])

HSP 1 Score: 120.9 bits (302), Expect = 2.5e-24
Identity = 70/120 (58.33%), Postives = 74/120 (61.67%), Query Frame = 3

Query: 231 KGRRALKNLRTAEVYGRGKVVQKMKTKRVGKSVPTGMMQRSGSGSVGG*HDKDRF*TENR 290
           KG+ ++K    AEVYGRGKVVQKMKTKRVGKSVPTG+MQRSGSGS               
Sbjct: 6   KGKESVKEFAAAEVYGRGKVVQKMKTKRVGKSVPTGIMQRSGSGS--------------- 65

Query: 291 *VGNRRHLAWKKNHGTXXXXXXXXXXXXXXXIGAMAPSGRGMKTPLPLQILTQRLPLIEK 350
                      KNHGT               IGAMAPSGRGMKTPLPLQILTQRLPLIEK
Sbjct: 66  -----------KNHGTRRGQEKRRREEENKRIGAMAPSGRGMKTPLPLQILTQRLPLIEK 99

Query: 351 410
           
Sbjct: 126 99

Query: 411 470
           
Sbjct: 186 99

Query: 471 530
           
Sbjct: 246 99

Query: 531 590
           
Sbjct: 306 99

BLAST of CU106516 vs. NCBI nr
Match: gi|778672805|ref|XP_011649874.1| (PREDICTED: patellin-3 [Cucumis sativus])

HSP 1 Score: 97.8 bits (242), Expect = 2.3e-17
Identity = 52/63 (82.54%), Postives = 56/63 (88.89%), Query Frame = -3

Query: 2   MDDRIPMVLPLRTPHHLALRKENPPLPTVESLSAMADSPILTEKESISPSEAVLESVPFT 61
           MDDRIPMVLPL  P   + ++ENPP PTVESLSA+ADSPILTEKESISPSEAVLESVPFT
Sbjct: 1   MDDRIPMVLPLADPPPSSTQEENPPPPTVESLSAVADSPILTEKESISPSEAVLESVPFT 60

Query: 62  TAE 121
           TAE
Sbjct: 61  TAE 63

Query: 122 181
           
Sbjct: 121 63

Query: 182 191
           
Sbjct: 181 63

BLAST of CU106516 vs. NCBI nr
Match: gi|659081078|ref|XP_008441140.1| (PREDICTED: patellin-3-like [Cucumis melo])

HSP 1 Score: 82.4 bits (202), Expect = 9.9e-13
Identity = 44/63 (69.84%), Postives = 52/63 (82.54%), Query Frame = -3

Query: 2   MDDRIPMVLPLRTPHHLALRKENPPLPTVESLSAMADSPILTEKESISPSEAVLESVPFT 61
           M+DRIPMVLPL  P   + ++ENPP P V SLSA+ADSPILTEKE+ISPSE VL+SVP +
Sbjct: 1   MEDRIPMVLPLVGPPPFSTQEENPPPPPVGSLSAVADSPILTEKETISPSEPVLKSVPLS 60

Query: 62  TAE 121
           TAE
Sbjct: 61  TAE 63

Query: 122 181
           
Sbjct: 121 63

Query: 182 191
           
Sbjct: 181 63

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LPX5_CUCSA3.5e-2558.33Uncharacterized protein OS=Cucumis sativus GN=Csa_2G386170 PE=4 SV=1[more]
A0A0A0LPX5_CUCSA4.4e+0170.83Uncharacterized protein OS=Cucumis sativus GN=Csa_2G386170 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700207930|gb|KGN63049.1|2.5e-2458.33hypothetical protein Csa_2G386170 [Cucumis sativus][more]
gi|778672805|ref|XP_011649874.1|2.3e-1782.54PREDICTED: patellin-3 [Cucumis sativus][more]
gi|659081078|ref|XP_008441140.1|9.9e-1369.84PREDICTED: patellin-3-like [Cucumis melo][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa2G386170Csa2G386170gene
Csa2G386180Csa2G386180gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
FKNP3UI02KHJ1OFKNP3UI02KHJ1OEST
FKNP3UI02NCZPGFKNP3UI02NCZPGEST
FKNP3UI02ND72ZFKNP3UI02ND72ZEST
H0051483H0051483EST
H0125689H0125689EST