CU106272 (transcribed_cluster) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CU106272
Type	transcribed_cluster
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Ethylene-responsive transcription factor 7
Location	Chr3 : 3926137 .. 3927088 (-)
Sequence length	958

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

CTTTTTTCTTTTTCTTTTTCCTTTTTATTTAATCCGTTATGAGGAGAGGGAGAGGGCCGGCCGTTGTACCCCCGCCGCGTGAACCACCAACACCAACCACCGGATCCGACCGGAGATATAGAGGTGTTAGAAAAAGGCCATGGGGAAGATTCGCGGCAGAGATCAGAGATCCATGGAAGAAGACGAGAGTCTGGTTAGGCACCTTCGATTCCGCAGAAGACGCCGCCCGTGCTTACGACCACGCTGCCATAACCCTCCGTGGCTCTAAAGCTAAAACCAATTTTCCCCTTTCCCCAATCCCACCTCGTTTTTCGATTATCCTCCTCATCCCGTCAACGCTCCAGATCCCTTCCCCGATCCCCGATATCAGATTAGACCTACTTCCAGTAGTTTGAGTTCCACCGTTGAATCCTTCAGCGGTCCTCGCCCCTCCCTCCTCCTCCCTTCCTGCCCTTACTAGCACTTCTCCCTCTCGTCGTTACCCTCGTACTCCCCCACTTCTCCCCGAGGATTGCCATAGCGATTGCGATTCTTCTTCCTCCGTTATCGACGACGGCGACGACATCGCTTCCTCCCCTGTCGTTCCTCGGAAAAAAACCCCTCTGCCTTTCGATCTCAACATTCCACCTTCCGATCTTTTTTGATTTTAGCAGCGATGATCTTCGATGTACCGCGTTGTGCCTTTGACCACCGGCGGCGATGATGCTGATGATGATGATGATGCAATAATTCAATATTTTATTGTTGTTGTTGTTATTATTAATATTAATCTCCACCTTCTTTTTTAATTTTAATTTTGTTATTATATTTTTTTATGTGCTGGCACGGCAGGCATAGAGAAAAGAGAAATTACCCGACAAGATTATCAAAAATCAAAAGCAATCATTTATCCTCACAACTATATATTATTCTTCCTTTTCTTTTCTTTTTTTCTTACTTCTATGTTTAAATTTGTAAT

Library


Library category	ESTs
fruit (8DPP) library	3
gynoecious flower library	8
hermaphrodite flower library	8
Cucumber female flower buds	1

Homology

[Close]

BLAST of CU106272 vs. Swiss-Prot
Match: ERF82_ARATH (Ethylene-responsive transcription factor 3 OS=Arabidopsis thaliana GN=ERF3 PE=1 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 9.4e-18
Identity = 49/90 (54.44%), Postives = 50/90 (55.56%), Query Frame = 3


Query: 114 RYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSXXXXXXXXXXXXITLRGSKAKTNFPL- 173
           R+RGVRKRPWGRFAAEIRDPWKK RVWLGTFDS              LRG KAKTNFP+ 
Sbjct: 27  RFRGVRKRPWGRFAAEIRDPWKKARVWLGTFDSAEEAARAYDSAARNLRGPKAKTNFPID 86

Query: 174 --SPIPPRFSIILLIPSTLQIPSPIPDIRL 233
             SP PP      +         P  D RL
Sbjct: 87  SSSPPPPNLRFNQIRNQNQNQVDPFMDHRL 116

Query: 234  293
           
Sbjct: 147  116

Query: 294  353
           
Sbjct: 207  116

Query: 354  375
           
Sbjct: 267  116

[Close]

BLAST of CU106272 vs. Swiss-Prot
Match: ERF3_TOBAC (Ethylene-responsive transcription factor 3 OS=Nicotiana tabacum GN=ERF3 PE=2 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.6e-17
Identity = 43/59 (72.88%), Postives = 42/59 (71.19%), Query Frame = 3


Query: 114 RYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSXXXXXXXXXXXXITLRGSKAKTNFPL 173
           R+RGVRKRPWGRFAAEIRDPWKKTRVWLGTFDS              LRG KAKTNFPL
Sbjct: 27  RFRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSAEDAARAYDAAARALRGPKAKTNFPL 85

Query: 174  233
           
Sbjct: 87   85

Query: 234  291
           
Sbjct: 147  85

[Close]

BLAST of CU106272 vs. Swiss-Prot
Match: ERF83_ARATH (Ethylene-responsive transcription factor 7 OS=Arabidopsis thaliana GN=ERF7 PE=1 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 3.9e-16
Identity = 44/69 (63.77%), Postives = 45/69 (65.22%), Query Frame = 3


Query: 114 RYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSXXXXXXXXXXXXITLRGSKAKTNFPL- 173
           RYRGVRKRPWGRFAAEIRDP KK+RVWLGTFDS              LRG KAKTNFP+ 
Sbjct: 26  RYRGVRKRPWGRFAAEIRDPLKKSRVWLGTFDSAVDAARAYDTAARNLRGPKAKTNFPID 85

Query: 174 ----SPIPP 233
               SP+ P
Sbjct: 86  CSPSSPLQP 94

Query: 234  293
           
Sbjct: 146  94

Query: 294  306
           
Sbjct: 206  94

[Close]

BLAST of CU106272 vs. Swiss-Prot
Match: ERF81_ARATH (Ethylene-responsive transcription factor 12 OS=Arabidopsis thaliana GN=ERF12 PE=2 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 5.1e-16
Identity = 42/61 (68.85%), Postives = 43/61 (70.49%), Query Frame = 3


Query: 117 YRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSXXXXXXXXXXXXITLRGSKAKTNFPLSP 176
           YRGVRKRPWGR+AAEIRDPWKKTRVWLGTFD+              LRG KAKTNFP SP
Sbjct: 12  YRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARFLRGIKAKTNFP-SP 71

Query: 177 I 236
           +
Sbjct: 72  L 71

Query: 237  296
           
Sbjct: 132  71

Query: 297  300
           
Sbjct: 192  71

[Close]

BLAST of CU106272 vs. Swiss-Prot
Match: ERF76_ARATH (Ethylene-responsive transcription factor 11 OS=Arabidopsis thaliana GN=ERF11 PE=2 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 5.1e-16
Identity = 44/88 (50.00%), Postives = 53/88 (60.23%), Query Frame = 3


Query: 114 RYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSXXXXXXXXXXXXITLRGSKAKTNFPLS 173
           RYRGVRKRPWGR+AAEIRDP+KK+RVWLGTFD+            I  RG+KAKTNFP  
Sbjct: 19  RYRGVRKRPWGRYAAEIRDPFKKSRVWLGTFDTPEEAARAYDKRAIEFRGAKAKTNFPCY 78

Query: 174 PIPPR-FSIILLIPSTLQIPSPIPDIRL 233
            I     S+   +  +  + S  P++ L
Sbjct: 79  NINAHCLSLTQSLSQSSTVESSFPNLNL 106

Query: 234  293
           
Sbjct: 139  106

Query: 294  353
           
Sbjct: 199  106

Query: 354  375
           
Sbjct: 259  106

[Close]

BLAST of CU106272 vs. TrEMBL
Match: A0A090IQD0_CUCSA (Ethylene-responsive transcription factor 7 OS=Cucumis sativus GN=erf-7 PE=2 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 1.3e-21
Identity = 58/89 (65.17%), Postives = 59/89 (66.29%), Query Frame = 3


Query: 105 SDRRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSXXXXXXXXXXXXITLRGSKAKTNF 164
           SDRRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDS            ITLRGSKAKTNF
Sbjct: 23  SDRRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSAEDAARAYDHAAITLRGSKAKTNF 82

Query: 165 PLSPIPPRFSIILLIPSTLQIPSPIPDIR 224
           PL   P   S     P  +  P P PD R
Sbjct: 83  PL---PNPTSFFDYPPHPVNAPDPFPDPR 108

Query: 225  284
           
Sbjct: 143  108

Query: 285  344
           
Sbjct: 203  108

Query: 345  372
           
Sbjct: 263  108

[Close]

BLAST of CU106272 vs. TrEMBL
Match: A0A090IQD0_CUCSA (Ethylene-responsive transcription factor 7 OS=Cucumis sativus GN=erf-7 PE=2 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 1.4e-12
Identity = 35/48 (72.92%), Postives = 35/48 (72.92%), Query Frame = 2


Query: 287 PFPNPTSFFDYPPHPVNAPDPFPDPRYQIRPTXXXXXXXXXXXXGPRP 346
           P PNPTSFFDYPPHPVNAPDPFPDPRYQIRPT            GPRP
Sbjct: 83  PLPNPTSFFDYPPHPVNAPDPFPDPRYQIRPTSSSLSSTVESFSGPRP 130

Query: 347  406
           
Sbjct: 143  130

Query: 407  431
           
Sbjct: 203  130

HSP 2 Score: 51.6 bits (122), Expect = 2.0e-03
Identity = 23/24 (95.83%), Postives = 23/24 (95.83%), Query Frame = 3


Query: 576 PVVPRKKTPLPFDLNIPPSDLF*F 635
           PVVPRKKTPLPFDLNIPPSDLF F
Sbjct: 179 PVVPRKKTPLPFDLNIPPSDLFDF 202

Query: 636  648
           
Sbjct: 239  202

HSP 3 Score: 36.2 bits (82), Expect = 8.9e+01
Identity = 15/15 (100.00%), Postives = 15/15 (100.00%), Query Frame = 1


Query: 640 FDFSSDDLRCTALCL 685
           FDFSSDDLRCTALCL
Sbjct: 200 FDFSSDDLRCTALCL 214

HSP 4 Score: 112.1 bits (279), Expect = 1.3e-21
Identity = 58/89 (65.17%), Postives = 59/89 (66.29%), Query Frame = 3


Query: 105 SDRRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSXXXXXXXXXXXXITLRGSKAKTNF 164
           SDRRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDS            ITLRGSKAKTNF
Sbjct: 23  SDRRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSAEDAARAYDHAAITLRGSKAKTNF 82

Query: 165 PLSPIPPRFSIILLIPSTLQIPSPIPDIR 224
           PL   P   S     P  +  P P PD R
Sbjct: 83  PL---PNPTSFFDYPPHPVNAPDPFPDPR 108

Query: 225  284
           
Sbjct: 143  108

Query: 285  344
           
Sbjct: 203  108

Query: 345  372
           
Sbjct: 263  108

[Close]

BLAST of CU106272 vs. TrEMBL
Match: A0A0A0L500_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G073900 PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 1.4e-12
Identity = 35/48 (72.92%), Postives = 35/48 (72.92%), Query Frame = 2


Query: 287 PFPNPTSFFDYPPHPVNAPDPFPDPRYQIRPTXXXXXXXXXXXXGPRP 346
           P PNPTSFFDYPPHPVNAPDPFPDPRYQIRPT            GPRP
Sbjct: 83  PLPNPTSFFDYPPHPVNAPDPFPDPRYQIRPTSSSLSSTVESFSGPRP 130

Query: 347  406
           
Sbjct: 143  130

Query: 407  431
           
Sbjct: 203  130

HSP 2 Score: 51.6 bits (122), Expect = 2.0e-03
Identity = 23/24 (95.83%), Postives = 23/24 (95.83%), Query Frame = 3


Query: 576 PVVPRKKTPLPFDLNIPPSDLF*F 635
           PVVPRKKTPLPFDLNIPPSDLF F
Sbjct: 179 PVVPRKKTPLPFDLNIPPSDLFDF 202

Query: 636  648
           
Sbjct: 239  202

HSP 3 Score: 36.2 bits (82), Expect = 8.9e+01
Identity = 15/15 (100.00%), Postives = 15/15 (100.00%), Query Frame = 1


Query: 640 FDFSSDDLRCTALCL 685
           FDFSSDDLRCTALCL
Sbjct: 200 FDFSSDDLRCTALCL 214

HSP 4 Score: 100.1 bits (248), Expect = 5.0e-18
Identity = 50/76 (65.79%), Postives = 54/76 (71.05%), Query Frame = 3


Query: 114 RYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSXXXXXXXXXXXXITLRGSKAKTNFPLS 173
           R+RGVRKRPWGRFAAEIRDPWKKTRVWLGTFDS             TLRG+KAKTNFPLS
Sbjct: 31  RFRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSAEDAARAYDSAARTLRGAKAKTNFPLS 90

Query: 174 PIPPRFSIILLIPSTL 233
           P     +  LLI + L
Sbjct: 91  PFQQNPNNDLLIENRL 106

Query: 234  293
           
Sbjct: 151  106

Query: 294  342
           
Sbjct: 211  106

[Close]

BLAST of CU106272 vs. TrEMBL
Match: R0I4B4_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10010284mg PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 1.5e-17
Identity = 51/88 (57.95%), Postives = 56/88 (63.64%), Query Frame = 3


Query: 111 RRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSXXXXXXXXXXXXITLRGSKAKTNFPL 170
           +R+RGVRKRPWGRFAAEIRDPWKK+RVWLGTFDS              LRG KAKTNFP+
Sbjct: 19  QRFRGVRKRPWGRFAAEIRDPWKKSRVWLGTFDSAEEAARAYDSAARNLRGPKAKTNFPI 78

Query: 171 SPIPPRFSIILLIPSTLQIPSPIPDIRL 230
            P  P     L  PST+    P  D RL
Sbjct: 79  LPSSPN----LPFPSTINQFDPFMDHRL 102

Query: 231  290
           
Sbjct: 139  102

Query: 291  350
           
Sbjct: 199  102

Query: 351  375
           
Sbjct: 259  102

[Close]

BLAST of CU106272 vs. TrEMBL
Match: M0S0Y1_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 1.9e-17
Identity = 47/68 (69.12%), Postives = 50/68 (73.53%), Query Frame = 3


Query: 108 DRRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSXXXXXXXXXXXXITLRGSKAKTNFP 167
           ++R+RGVRKRPWGRFAAEIRDPWKKTRVWLGTFDS            I LRG KAKTNFP
Sbjct: 24  EKRFRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSAEDAARAYDAAAIALRGPKAKTNFP 83

Query: 168 L--SPIPP 227
              SP PP
Sbjct: 84  SPPSPFPP 91

Query: 228  287
           
Sbjct: 144  91

Query: 288  306
           
Sbjct: 204  91

[Close]

BLAST of CU106272 vs. NCBI nr
Match: gi|700200966|gb|KGN56099.1| (hypothetical protein Csa_3G073900 [Cucumis sativus])

HSP 1 Score: 110.5 bits (275), Expect = 5.3e-21
Identity = 58/89 (65.17%), Postives = 59/89 (66.29%), Query Frame = 3


Query: 105 SDRRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSXXXXXXXXXXXXITLRGSKAKTNF 164
           SDRRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDS            ITLRGSKAKTNF
Sbjct: 23  SDRRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSAEDAARAYDHAAITLRGSKAKTNF 82

Query: 165 PLSPIPPRFSIILLIPSTLQIPSPIPDIR 224
           PL   P   S     P  +  P P PD R
Sbjct: 83  PL---PNPTSFFDYPPHPVNAPDPFPDPR 108

Query: 225  284
           
Sbjct: 143  108

Query: 285  344
           
Sbjct: 203  108

Query: 345  372
           
Sbjct: 263  108

[Close]

BLAST of CU106272 vs. NCBI nr
Match: gi|659096517|ref|XP_008449140.1| (PREDICTED: ethylene-responsive transcription factor 3 [Cucumis melo])

HSP 1 Score: 110.5 bits (275), Expect = 5.3e-21
Identity = 58/89 (65.17%), Postives = 59/89 (66.29%), Query Frame = 3


Query: 105 SDRRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSXXXXXXXXXXXXITLRGSKAKTNF 164
           SDRRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDS            ITLRGSKAKTNF
Sbjct: 87  SDRRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSAEDAARAYDNAAITLRGSKAKTNF 146

Query: 165 PLSPIPPRFSIILLIPSTLQIPSPIPDIR 224
           PL   P   S     P  +  P P PD R
Sbjct: 147 PL---PNPTSFFDYPPHPVNAPDPFPDPR 172

Query: 225  284
           
Sbjct: 207  172

Query: 285  344
           
Sbjct: 267  172

Query: 345  372
           
Sbjct: 327  172

[Close]

BLAST of CU106272 vs. NCBI nr
Match: gi|821595459|ref|NP_001295846.1| (ethylene-responsive transcription factor 3 [Cucumis sativus])

HSP 1 Score: 110.5 bits (275), Expect = 5.3e-21
Identity = 58/89 (65.17%), Postives = 59/89 (66.29%), Query Frame = 3


Query: 105 SDRRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSXXXXXXXXXXXXITLRGSKAKTNF 164
           SDRRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDS            ITLRGSKAKTNF
Sbjct: 23  SDRRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSAEDAARAYDHAAITLRGSKAKTNF 82

Query: 165 PLSPIPPRFSIILLIPSTLQIPSPIPDIR 224
           PL   P   S     P  +  P P PD R
Sbjct: 83  PL---PNPTSFFDYPPHPVNAPDPFPDPR 108

Query: 225  284
           
Sbjct: 143  108

Query: 285  344
           
Sbjct: 203  108

Query: 345  372
           
Sbjct: 263  108

[Close]

BLAST of CU106272 vs. NCBI nr
Match: gi|743758809|ref|XP_010928920.1| (PREDICTED: ethylene-responsive transcription factor 12 [Elaeis guineensis])

HSP 1 Score: 101.3 bits (251), Expect = 3.2e-18
Identity = 52/85 (61.18%), Postives = 60/85 (70.59%), Query Frame = 3


Query: 117 YRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSXXXXXXXXXXXXITLRGSKAKTNFPL-S 176
           YRGVRKRPWGR+AAEIRDPWKKTRVWLGTFD+             +LRG KAKTNFPL S
Sbjct: 9   YRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDQAARSLRGEKAKTNFPLPS 68

Query: 177 PIPPRFSIILLIPSTLQI--PSPIP 236
           P PP  S+ L +P  L +  P+P+P
Sbjct: 69  PPPPHLSLDLNLPCHLWMGPPAPVP 93

Query: 237  296
           
Sbjct: 129  93

Query: 297  356
           
Sbjct: 189  93

Query: 357  363
           
Sbjct: 249  93

[Close]

BLAST of CU106272 vs. NCBI nr
Match: gi|743880852|ref|XP_010908748.1| (PREDICTED: ethylene-responsive transcription factor 12-like [Elaeis guineensis])

HSP 1 Score: 100.1 bits (248), Expect = 7.2e-18
Identity = 52/84 (61.90%), Postives = 57/84 (67.86%), Query Frame = 3


Query: 114 RYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSXXXXXXXXXXXXITLRGSKAKTNFPLS 173
           RYRGVRKRPWGR+AAEIRDPWKKTRVWLGTFD+             TLRG KAKTNFPL 
Sbjct: 8   RYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDQAARTLRGVKAKTNFPLP 67

Query: 174 PIPP-RFSIILLIPSTLQIPSPIP 233
           P PP   S+ L +P  L +  P P
Sbjct: 68  PPPPSHLSLDLNLPCHLWMGPPQP 91

Query: 234  293
           
Sbjct: 128  91

Query: 294  353
           
Sbjct: 188  91

Query: 354  363
           
Sbjct: 248  91

The following BLAST results are available for this feature:

BLAST of CU106272 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ERF82_ARATH	9.4e-18	54.44	Ethylene-responsive transcription factor 3 OS=Arabidopsis thaliana GN=ERF3 PE=1 ...	[more]
ERF3_TOBAC	1.6e-17	72.88	Ethylene-responsive transcription factor 3 OS=Nicotiana tabacum GN=ERF3 PE=2 SV=...	[more]
ERF83_ARATH	3.9e-16	63.77	Ethylene-responsive transcription factor 7 OS=Arabidopsis thaliana GN=ERF7 PE=1 ...	[more]
ERF81_ARATH	5.1e-16	68.85	Ethylene-responsive transcription factor 12 OS=Arabidopsis thaliana GN=ERF12 PE=...	[more]
ERF76_ARATH	5.1e-16	50.00	Ethylene-responsive transcription factor 11 OS=Arabidopsis thaliana GN=ERF11 PE=...	[more]

BLAST of CU106272 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A090IQD0_CUCSA	1.3e-21	65.17	Ethylene-responsive transcription factor 7 OS=Cucumis sativus GN=erf-7 PE=2 SV=1	[more]
A0A090IQD0_CUCSA	1.4e-12	72.92	Ethylene-responsive transcription factor 7 OS=Cucumis sativus GN=erf-7 PE=2 SV=1	[more]
A0A0A0L500_CUCSA	1.4e-12	72.92	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G073900 PE=4 SV=1	[more]
R0I4B4_9BRAS	1.5e-17	57.95	Uncharacterized protein OS=Capsella rubella GN=CARUB_v10010284mg PE=4 SV=1	[more]
M0S0Y1_MUSAM	1.9e-17	69.12	Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1	[more]

BLAST of CU106272 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700200966\|gb\|KGN56099.1\|	5.3e-21	65.17	hypothetical protein Csa_3G073900 [Cucumis sativus]	[more]
gi\|659096517\|ref\|XP_008449140.1\|	5.3e-21	65.17	PREDICTED: ethylene-responsive transcription factor 3 [Cucumis melo]	[more]
gi\|821595459\|ref\|NP_001295846.1\|	5.3e-21	65.17	ethylene-responsive transcription factor 3 [Cucumis sativus]	[more]
gi\|743758809\|ref\|XP_010928920.1\|	3.2e-18	61.18	PREDICTED: ethylene-responsive transcription factor 12 [Elaeis guineensis]	[more]
gi\|743880852\|ref\|XP_010908748.1\|	7.2e-18	61.90	PREDICTED: ethylene-responsive transcription factor 12-like [Elaeis guineensis]	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition
IPR001471	AP2/ERF_dom
IPR016177	DNA-bd_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0003700	transcription factor activity, sequence-specific DNA binding
GO:0003677	DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

GO Annotation

GO Assignments

This transcribed_cluster is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
Csa3G073900	Csa3G073900	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
FKNP3UI02LNY29	FKNP3UI02LNY29	EST
FKNP3UI02MLMGY	FKNP3UI02MLMGY	EST
FKNP3UI02MM10T	FKNP3UI02MM10T	EST
G0011411	G0011411	EST
G0023380	G0023380	EST
G0061564	G0061564	EST
G0122933	G0122933	EST
G0157750	G0157750	EST
G0170669	G0170669	EST
G0183468	G0183468	EST
G0199235	G0199235	EST
H0007670	H0007670	EST
H0011633	H0011633	EST
H0059033	H0059033	EST
H0061961	H0061961	EST
H0062151	H0062151	EST
H0100674	H0100674	EST
H0131699	H0131699	EST
H0147429	H0147429	EST
csa01-3ms4-f08	csa01-3ms4-f08	EST

InterPro

Analysis Name: InterPro Annotations of cucumber unigene v3
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 49..65 score: 3.5E-11coord: 27..38 score: 3.5
IPR001471	AP2/ERF domain	GENE3D	G3DSA:3.30.730.10		coord: 26..84 score: 7.3
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 26..75 score: 7.3
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 26..89 score: 1.9
IPR001471	AP2/ERF domain	PROFILE	PS51032	AP2_ERF	coord: 26..83 score: 23
IPR016177	DNA-binding domain	unknown	SSF54171	DNA-binding domain	coord: 26..85 score: 4.45
None	No IPR available	PANTHER	PTHR31677	FAMILY NOT NAMED	coord: 24..106 score: 1.2