CU106269 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU106269
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr6 : 12607077 .. 12607567 (+)
Sequence length493
The following sequences are available for this feature:

transcribed_cluster sequence

CTTTAAATAAAAATATATAATATAATATATATAAATGAATAAATGAAGAACTCAAAATAATAATGGCCTAAGGCCTTGCAAATTCAGCAAGATCCACCAGCAATTTACACAAATAATATGTTCCTTCCTACCACTGTATTACCAATTCCAAACAAGAACAAATGATTTGGGAAATAAACGAGAGGAATCAGCCACGAAAAAGGAAAAAAAAATCATGTAGAAGACTCAGAGAAAACAGAGATGTAAATTAAATTACATTTTTCAACCATCAGTGTATATATATGAATTTTATTACTCGATCGACATGTATATCCAGTATAAACACACGAAGAACTAACCGAAAGAGTACGACGACGAATCTAACTTCCAAAAAATGAATCAAGTGAAACGAAATCAACTTCTGCAGCGAGTAATAGCGCTGCAACCACGGGTGTAAGGATTCGCCTGAGCACCTGGTCTGCAGTTGTAATAAGAAGCACCACGACGAGAGCAA
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
The following terms have been associated with this transcribed_cluster:
Vocabulary: INTERPRO
TermDefinition
IPR008801RALF

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa6G194150Csa6G194150gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
FKNP3UI02KPVN3FKNP3UI02KPVN3EST
FKNP3UI02L897WFKNP3UI02L897WEST
FKNP3UI02M4NJQFKNP3UI02M4NJQEST
FKNP3UI02MFTPPFKNP3UI02MFTPPEST
FKNP3UI02OJRS3FKNP3UI02OJRS3EST
G0074003G0074003EST
G0091722G0091722EST
G0151074G0151074EST
H0043218H0043218EST
H0079408H0079408EST
H0079439H0079439EST
H0113870H0113870EST
H0158032H0158032EST
H0190084H0190084EST


Analysis Name: InterPro Annotations of cucumber unigene v3
Date Performed: 2016-11-16
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008801Rapid ALkalinization FactorPFAMPF05498RALFcoord: 2..32
score: 3.1
NoneNo IPR availablePANTHERPTHR33136FAMILY NOT NAMEDcoord: 2..33
score: 1.5
NoneNo IPR availablePANTHERPTHR33136:SF13PROTEIN RALF-LIKE 22coord: 2..33
score: 1.5