CU104178 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU104178
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr6 : 11681064 .. 11681567 (-)
Sequence length506
The following sequences are available for this feature:

transcribed_cluster sequence

TTCAGTTGTTCATAGCCATAAATTTAGTTTGATAATCTTCTTGCGCCAATGGAGATTCAATCGTTCCTTGGATGGAAGAACAATATGACAGTATTTCAAATAAAGTACCAAACAACATTTCACATTGAAGATTAAATTGTAGACCACTAAGCACCAGCCAGAACAACAAAATGGGAGTTGAACTTTATCATTTATTCACGTTATTACTTCAACTTTCTTAACAGAACAGTGAAGAAAATGGATACTAAACCATCGCCACTAGCATTACAAAAATTGTGGATGAAAAACTGTTATCTGTACATTTTCTTCAAGTGCGTGTGCTTGGAAAGGTGTTTGTCCTAAGAACCTGGATTTTCTTTAAATGTTGATAGAATCAACTCAAGTAAAGTGAGATTCAAACCATGTGAAGATCTTGTCAGCCTCTAAGCTAGTCATTTCGTGGTATGCAAAGGCAAGATTCAACTCTTCTTGAATGTGATTGGTTAAACTATTATCAGGTAAACTAA
BLAST of CU104178 vs. TrEMBL
Match: A0A0A0KH09_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G178940 PE=4 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 6.1e-15
Identity = 41/41 (100.00%), Postives = 41/41 (100.00%), Query Frame = -3

Query: 382 SLPDNSLTNHIQEELNLAFAYHEMTSLEADKIFTWFESHFT 441
           SLPDNSLTNHIQEELNLAFAYHEMTSLEADKIFTWFESHFT
Sbjct: 306 SLPDNSLTNHIQEELNLAFAYHEMTSLEADKIFTWFESHFT 346

Query: 442 501
           
Sbjct: 366 346

Query: 502 505
           
Sbjct: 426 346

BLAST of CU104178 vs. TrEMBL
Match: K4CGC7_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 5.0e-09
Identity = 28/40 (70.00%), Postives = 36/40 (90.00%), Query Frame = -3

Query: 382 LPDNSLTNHIQEELNLAFAYHEMTSLEADKIFTWFESHFT 441
           LPD S+ NHIQEE+NLAFAYHEMTSL++++IF WFE+H +
Sbjct: 302 LPDKSIANHIQEEMNLAFAYHEMTSLQSEQIFNWFETHMS 341

Query: 442 501
           
Sbjct: 362 341

BLAST of CU104178 vs. TrEMBL
Match: M1BGD2_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400017296 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 5.0e-09
Identity = 28/40 (70.00%), Postives = 36/40 (90.00%), Query Frame = -3

Query: 382 LPDNSLTNHIQEELNLAFAYHEMTSLEADKIFTWFESHFT 441
           LPD S+ NHIQEE+NLAFAYHEMTSL++++IF WFE+H +
Sbjct: 285 LPDKSIANHIQEEMNLAFAYHEMTSLQSEQIFNWFETHMS 324

Query: 442 501
           
Sbjct: 345 324

BLAST of CU104178 vs. TrEMBL
Match: A0A022QPR4_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a008811mg PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 6.5e-09
Identity = 30/38 (78.95%), Postives = 34/38 (89.47%), Query Frame = -3

Query: 388 LPDNSLTNHIQEELNLAFAYHEMTSLEADKIFTWFESH 447
           LPD SL NHIQEE+NLAFAYHEMTSL++ +IF WFESH
Sbjct: 321 LPDKSLVNHIQEEMNLAFAYHEMTSLQSRQIFDWFESH 358

Query: 448 502
           
Sbjct: 381 358

BLAST of CU104178 vs. TrEMBL
Match: A0A0V0I8R2_SOLCH (Putative secretion-regulating guanine nucleotide exchange factor-like OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 8.5e-09
Identity = 28/40 (70.00%), Postives = 36/40 (90.00%), Query Frame = -3

Query: 382 LPDNSLTNHIQEELNLAFAYHEMTSLEADKIFTWFESHFT 441
           LPD S+ NHIQEE+NLAFAYHEMTSL++++IF WFE+H +
Sbjct: 285 LPDKSIANHIQEEMNLAFAYHEMTSLQSEQIFHWFETHMS 324

Query: 442 501
           
Sbjct: 345 324

BLAST of CU104178 vs. NCBI nr
Match: gi|449450852|ref|XP_004143176.1| (PREDICTED: uncharacterized protein LOC101217366 isoform X1 [Cucumis sativus])

HSP 1 Score: 89.0 bits (219), Expect = 8.7e-15
Identity = 41/41 (100.00%), Postives = 41/41 (100.00%), Query Frame = -3

Query: 382 SLPDNSLTNHIQEELNLAFAYHEMTSLEADKIFTWFESHFT 441
           SLPDNSLTNHIQEELNLAFAYHEMTSLEADKIFTWFESHFT
Sbjct: 306 SLPDNSLTNHIQEELNLAFAYHEMTSLEADKIFTWFESHFT 346

Query: 442 501
           
Sbjct: 366 346

Query: 502 505
           
Sbjct: 426 346

BLAST of CU104178 vs. NCBI nr
Match: gi|659112903|ref|XP_008456361.1| (PREDICTED: uncharacterized protein LOC103496322 isoform X2 [Cucumis melo])

HSP 1 Score: 89.0 bits (219), Expect = 8.7e-15
Identity = 41/41 (100.00%), Postives = 41/41 (100.00%), Query Frame = -3

Query: 382 SLPDNSLTNHIQEELNLAFAYHEMTSLEADKIFTWFESHFT 441
           SLPDNSLTNHIQEELNLAFAYHEMTSLEADKIFTWFESHFT
Sbjct: 306 SLPDNSLTNHIQEELNLAFAYHEMTSLEADKIFTWFESHFT 346

Query: 442 501
           
Sbjct: 366 346

Query: 502 505
           
Sbjct: 426 346

BLAST of CU104178 vs. NCBI nr
Match: gi|659112893|ref|XP_008456356.1| (PREDICTED: uncharacterized protein LOC103496322 isoform X1 [Cucumis melo])

HSP 1 Score: 89.0 bits (219), Expect = 8.7e-15
Identity = 41/41 (100.00%), Postives = 41/41 (100.00%), Query Frame = -3

Query: 382 SLPDNSLTNHIQEELNLAFAYHEMTSLEADKIFTWFESHFT 441
           SLPDNSLTNHIQEELNLAFAYHEMTSLEADKIFTWFESHFT
Sbjct: 311 SLPDNSLTNHIQEELNLAFAYHEMTSLEADKIFTWFESHFT 351

Query: 442 501
           
Sbjct: 371 351

Query: 502 505
           
Sbjct: 431 351

BLAST of CU104178 vs. NCBI nr
Match: gi|778713742|ref|XP_011657111.1| (PREDICTED: uncharacterized protein LOC101217366 isoform X2 [Cucumis sativus])

HSP 1 Score: 75.9 bits (185), Expect = 7.7e-11
Identity = 35/35 (100.00%), Postives = 35/35 (100.00%), Query Frame = -3

Query: 400 SLPDNSLTNHIQEELNLAFAYHEMTSLEADKIFTW 459
           SLPDNSLTNHIQEELNLAFAYHEMTSLEADKIFTW
Sbjct: 306 SLPDNSLTNHIQEELNLAFAYHEMTSLEADKIFTW 340

Query: 460 505
           
Sbjct: 366 340

BLAST of CU104178 vs. NCBI nr
Match: gi|659112907|ref|XP_008456364.1| (PREDICTED: uncharacterized protein LOC103496322 isoform X3 [Cucumis melo])

HSP 1 Score: 75.9 bits (185), Expect = 7.7e-11
Identity = 35/35 (100.00%), Postives = 35/35 (100.00%), Query Frame = -3

Query: 400 SLPDNSLTNHIQEELNLAFAYHEMTSLEADKIFTW 459
           SLPDNSLTNHIQEELNLAFAYHEMTSLEADKIFTW
Sbjct: 311 SLPDNSLTNHIQEELNLAFAYHEMTSLEADKIFTW 345

Query: 460 505
           
Sbjct: 371 345

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0KH09_CUCSA6.1e-15100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G178940 PE=4 SV=1[more]
K4CGC7_SOLLC5.0e-0970.00Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1[more]
M1BGD2_SOLTU5.0e-0970.00Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400017296 PE=4 SV=1[more]
A0A022QPR4_ERYGU6.5e-0978.95Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a008811mg PE=4 SV=1[more]
A0A0V0I8R2_SOLCH8.5e-0970.00Putative secretion-regulating guanine nucleotide exchange factor-like OS=Solanum... [more]
Match NameE-valueIdentityDescription
gi|449450852|ref|XP_004143176.1|8.7e-15100.00PREDICTED: uncharacterized protein LOC101217366 isoform X1 [Cucumis sativus][more]
gi|659112903|ref|XP_008456361.1|8.7e-15100.00PREDICTED: uncharacterized protein LOC103496322 isoform X2 [Cucumis melo][more]
gi|659112893|ref|XP_008456356.1|8.7e-15100.00PREDICTED: uncharacterized protein LOC103496322 isoform X1 [Cucumis melo][more]
gi|778713742|ref|XP_011657111.1|7.7e-11100.00PREDICTED: uncharacterized protein LOC101217366 isoform X2 [Cucumis sativus][more]
gi|659112907|ref|XP_008456364.1|7.7e-11100.00PREDICTED: uncharacterized protein LOC103496322 isoform X3 [Cucumis melo][more]
The following terms have been associated with this transcribed_cluster:
Vocabulary: INTERPRO
TermDefinition

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa6G178940Csa6G178940gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
G0106424G0106424EST
G0127487G0127487EST
G0135849G0135849EST
H0060167H0060167EST


Analysis Name: InterPro Annotations of cucumber unigene v3
Date Performed: 2016-11-16
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35128FAMILY NOT NAMEDcoord: 3..40
score: 8.3
NoneNo IPR availablePANTHERPTHR35128:SF1SUBFAMILY NOT NAMEDcoord: 3..40
score: 8.3