CU103812 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU103812
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr7 : 17187692 .. 17188106 (-)
Sequence length417
The following sequences are available for this feature:

transcribed_cluster sequence

GTCGTGGTGTATCCGGTGTTCAACTCCAACTCCAGTTTCTTGCTACTCCGCCGCCGTTCCTGCAGCCGATACGCCGCCGGTGGGTGGTGGGGTGCTCCAGTTAGCTTTTGTACGATTGATCGGAATGTTGATGGGTCAGCTTCGACGAAGGTTGTGGTAGAGGAATGGACAACGGCGGTGGCGTTGGTGGTGGCCATGGGGAAGAGTATTTTTTTTGAAAAACAGAGAGAATGGGGGAAGAAGGGAGGAAGAGGGGGTTTTATTGAGTGGAGGAAAGAGAGAATTGGGAATTTAGTGGTTGAAATTGAAAAAAAAGTTTTGCTTTTTTCTAAATTATTATTTTTTGGGTCATAAGGAAGTCATTTCATTGGCGAAATGGGAATGATGTTGCAATGAAACTTCTTCAATGAAACCAAG
BLAST of CU103812 vs. Swiss-Prot
Match: VQ11_ARATH (VQ motif-containing protein 11 OS=Arabidopsis thaliana GN=VQ11 PE=1 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 8.0e-06
Identity = 31/66 (46.97%), Postives = 37/66 (56.06%), Query Frame = -2

Query: 18  TTFVEADPSTFRSIVQKLTGAP--------------HH------PPAAYRLQERRRSSKK 77
           T FV+ADPS FR+IVQKLTGAP              H          A++L ERR+SSKK
Sbjct: 15  TMFVQADPSNFRNIVQKLTGAPPDISSSSFSAVSAAHQKLPLTPKKPAFKLHERRQSSKK 74

Query: 78  LELELN 137
           +EL++N
Sbjct: 75  MELKVN 80

Query: 138 156
           
Sbjct: 135 80

BLAST of CU103812 vs. TrEMBL
Match: A0A0A0K6W6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G432350 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 6.7e-28
Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = -2

Query: 3   MATTNATAVVHSSTTTFVEADPSTFRSIVQKLTGAPHHPPAAYRLQERRRSSKKLELELN 62
           MATTNATAVVHSSTTTFVEADPSTFRSIVQKLTGAPHHPPAAYRLQERRRSSKKLELELN
Sbjct: 1   MATTNATAVVHSSTTTFVEADPSTFRSIVQKLTGAPHHPPAAYRLQERRRSSKKLELELN 60

Query: 63  TGYTT 122
           TGYTT
Sbjct: 61  TGYTT 65

Query: 123 182
           
Sbjct: 121 65

Query: 183 198
           
Sbjct: 181 65

BLAST of CU103812 vs. TrEMBL
Match: A0A161ZWA8_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_021355 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 1.9e-06
Identity = 36/82 (43.90%), Postives = 48/82 (58.54%), Query Frame = -2

Query: 18  NATAVVHSSTTTFVEADPSTFRSIVQKLTGAPHHP-------------PAA--------- 77
           ++T   +++TTTFV+ADPS FR++VQKLTGAP  P             PA          
Sbjct: 24  DSTPPPNATTTTFVQADPSNFRAVVQKLTGAPSDPSTPKLPVTLPSRFPAGKPTSGEIGP 83

Query: 78  ----YRLQERRRSSKKLELELN 137
               ++LQERR+S KKLEL+LN
Sbjct: 84  RKQPFKLQERRQSGKKLELQLN 105

Query: 138 186
           
Sbjct: 144 105

BLAST of CU103812 vs. TrEMBL
Match: M5WR14_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012011mg PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 7.2e-06
Identity = 33/77 (42.86%), Postives = 43/77 (55.84%), Query Frame = -2

Query: 15  SSTTTFVEADPSTFRSIVQKLTGAPHHPPA---------------------------AYR 74
           S  TT+V+ADP+TFR++VQKLTGAP  P A                           A++
Sbjct: 12  SPNTTYVQADPATFRAVVQKLTGAPEDPSAQKLPLTLPARYSNPKPTTATEMGPRRPAFK 71

Query: 75  LQERRRSSKKLELELNT 134
           L ERR+++KKLEL LNT
Sbjct: 72  LHERRQATKKLELNLNT 88

Query: 135 165
           
Sbjct: 132 88

BLAST of CU103812 vs. TrEMBL
Match: A0A067KXP3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06106 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 9.5e-06
Identity = 33/74 (44.59%), Postives = 43/74 (58.11%), Query Frame = -2

Query: 3   SSTTTFVEADPSTFRSIVQKLTGAPHHPPA--------------------AYRLQERRRS 62
           S  TTFV+ADPSTFR+IVQKLTGAP  P                      A++LQERR+S
Sbjct: 14  SPNTTFVQADPSTFRTIVQKLTGAPDDPSTQKLPLTHPSRPTAIPGPKRPAFKLQERRQS 73

Query: 63  SKKLELELNTGYTT 122
            K L++ L++  +T
Sbjct: 74  VKNLQINLSSNNST 87

Query: 123 165
           
Sbjct: 134 87

BLAST of CU103812 vs. NCBI nr
Match: gi|778729019|ref|XP_004154113.2| (PREDICTED: VQ motif-containing protein 11 [Cucumis sativus])

HSP 1 Score: 128.3 bits (321), Expect = 1.1e-26
Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = -2

Query: 3   MATTNATAVVHSSTTTFVEADPSTFRSIVQKLTGAPHHPPAAYRLQERRRSSKKLELELN 62
           MATTNATAVVHSSTTTFVEADPSTFRSIVQKLTGAPHHPPAAYRLQERRRSSKKLELELN
Sbjct: 1   MATTNATAVVHSSTTTFVEADPSTFRSIVQKLTGAPHHPPAAYRLQERRRSSKKLELELN 60

Query: 63  TGYTT 122
           TGYTT
Sbjct: 61  TGYTT 65

Query: 123 182
           
Sbjct: 121 65

Query: 183 198
           
Sbjct: 181 65

BLAST of CU103812 vs. NCBI nr
Match: gi|659122976|ref|XP_008461422.1| (PREDICTED: uncharacterized protein LOC103500018 [Cucumis melo])

HSP 1 Score: 122.1 bits (305), Expect = 7.7e-25
Identity = 61/64 (95.31%), Postives = 64/64 (100.00%), Query Frame = -2

Query: 6   MATTNATAVVHSSTTTFVEADPSTFRSIVQKLTGAPHHPPAAYRLQERRRSSKKLELELN 65
           MATTNATAV+HS+TTTFVEADPSTFRSIVQKLTGAP+HPPAAYRLQERRRSSKKLELELN
Sbjct: 1   MATTNATAVIHSATTTFVEADPSTFRSIVQKLTGAPNHPPAAYRLQERRRSSKKLELELN 60

Query: 66  TGYT 125
           TGYT
Sbjct: 61  TGYT 64

Query: 126 185
           
Sbjct: 121 64

Query: 186 198
           
Sbjct: 181 64

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
VQ11_ARATH8.0e-0646.97VQ motif-containing protein 11 OS=Arabidopsis thaliana GN=VQ11 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0K6W6_CUCSA6.7e-28100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G432350 PE=4 SV=1[more]
A0A161ZWA8_DAUCA1.9e-0643.90Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_021355 PE=4 SV=1[more]
M5WR14_PRUPE7.2e-0642.86Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012011mg PE=4 SV=1[more]
A0A067KXP3_JATCU9.5e-0644.59Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06106 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|778729019|ref|XP_004154113.2|1.1e-26100.00PREDICTED: VQ motif-containing protein 11 [Cucumis sativus][more]
gi|659122976|ref|XP_008461422.1|7.7e-2595.31PREDICTED: uncharacterized protein LOC103500018 [Cucumis melo][more]
The following terms have been associated with this transcribed_cluster:
Vocabulary: INTERPRO
TermDefinition
IPR008889VQ

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa7G432350Csa7G432350gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
G0069697G0069697EST
G0191215G0191215EST
G0193216G0193216EST
H0033930H0033930EST
H0111105H0111105EST
H0166055H0166055EST


Analysis Name: InterPro Annotations of cucumber unigene v3
Date Performed: 2016-11-16
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008889VQPFAMPF05678VQcoord: 13..39
score: 8.2