CU103655 (transcribed_cluster) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CU103655
Type	transcribed_cluster
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Alpha/beta-Hydrolases superfamily protein
Location	Chr4 : 15399794 .. 15400065 (-)
Sequence length	274

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

GTGCTATACCCTGAGTTCATTAGACATTTAAAGAAAATTTGTACAGTCACTTGGAAAATCAAAAGCATCAACTAATGGTTCTGAGAAGGCTAAAGTAGAAATTGACAATCAGAACAAACCATCTGAAACTGGGCCTTCTGATACGTTCGAATTGGCTGCTGATCTTCCTGAAGTTTCCCGAAACAGTTTAGATAGTCGGCTTGAGAAGTCAAAAAAAGCAAACAAGCCTGAGAAATCTCGTATGAGCACTGATCGCGTCGATAGGTTTAGGAAA

Library


Library category	ESTs
fruit (8DPP) library	1
gynoecious flower library	1
hermaphrodite flower library	1

Homology

[Close]

BLAST of CU103655 vs. TrEMBL
Match: A0A0A0L0Q0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G410820 PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 3.4e-36
Identity = 80/81 (98.77%), Postives = 81/81 (100.00%), Query Frame = 2


Query: 32  RKFVQSLGKSKASTNGSEKAKVEIDNQNKPSETGPSDTFELAADLPEVSRNSLDSRLEKS 91
           +KFVQSLGKSKASTNGSEKAKVEIDNQNKPSETGPSDTFELAADLPEVSRNSLDSRLEKS
Sbjct: 256 KKFVQSLGKSKASTNGSEKAKVEIDNQNKPSETGPSDTFELAADLPEVSRNSLDSRLEKS 315

Query: 92  KKANKPEKSRMSTDRVDRFRK 151
           KKANKPEKSRMSTDRVDRFRK
Sbjct: 316 KKANKPEKSRMSTDRVDRFRK 336

Query: 152  211
           
Sbjct: 376  336

Query: 212  271
           
Sbjct: 436  336

Query: 272  275
           
Sbjct: 496  336

[Close]

BLAST of CU103655 vs. TrEMBL
Match: A0A061EI99_THECC (Alpha/beta-Hydrolases superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_019386 PE=4 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 3.4e-28
Identity = 66/81 (81.48%), Postives = 72/81 (88.89%), Query Frame = 2


Query: 32  RKFVQSLGKSKASTNGSEKAKVEIDNQNKPSETGPSDTFELAADLPEVSRNSLDSRLEKS 91
           +KFV SL KSKA+TNGSEK  V  DNQ+KPSE G SDTFEL +DLPEVSRNSLDSRLEKS
Sbjct: 256 KKFVLSLNKSKAATNGSEKTMVNSDNQSKPSEIGTSDTFELGSDLPEVSRNSLDSRLEKS 315

Query: 92  KKANKPEKSRMSTDRVDRFRK 151
           KK+NKPEKSRMSTDRVDRFR+
Sbjct: 316 KKSNKPEKSRMSTDRVDRFRR 336

Query: 152  211
           
Sbjct: 376  336

Query: 212  271
           
Sbjct: 436  336

Query: 272  275
           
Sbjct: 496  336

[Close]

BLAST of CU103655 vs. TrEMBL
Match: A0A061EHM1_THECC (Alpha/beta-Hydrolases superfamily protein isoform 2 OS=Theobroma cacao GN=TCM_019386 PE=4 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 3.4e-28
Identity = 66/81 (81.48%), Postives = 72/81 (88.89%), Query Frame = 2


Query: 32  RKFVQSLGKSKASTNGSEKAKVEIDNQNKPSETGPSDTFELAADLPEVSRNSLDSRLEKS 91
           +KFV SL KSKA+TNGSEK  V  DNQ+KPSE G SDTFEL +DLPEVSRNSLDSRLEKS
Sbjct: 146 KKFVLSLNKSKAATNGSEKTMVNSDNQSKPSEIGTSDTFELGSDLPEVSRNSLDSRLEKS 205

Query: 92  KKANKPEKSRMSTDRVDRFRK 151
           KK+NKPEKSRMSTDRVDRFR+
Sbjct: 206 KKSNKPEKSRMSTDRVDRFRR 226

Query: 152  211
           
Sbjct: 266  226

Query: 212  271
           
Sbjct: 326  226

Query: 272  275
           
Sbjct: 386  226

[Close]

BLAST of CU103655 vs. TrEMBL
Match: A0A067KL51_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13031 PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 2.9e-27
Identity = 65/81 (80.25%), Postives = 74/81 (91.36%), Query Frame = 2


Query: 32  RKFVQSLGKSKASTNGSEKAKVEIDNQNKPSETGPSDTFELAADLPEVSRNSLDSRLEKS 91
           +KFV SLGKSKA+TNGS+K  V ++NQNKPSE+G SDTFEL ADLPE+SRNSLDSRLEKS
Sbjct: 51  KKFVLSLGKSKAATNGSKKTTV-LENQNKPSESGTSDTFELGADLPEISRNSLDSRLEKS 110

Query: 92  KKANKPEKSRMSTDRVDRFRK 151
           KK +KPEKSRMSTDRVDRFR+
Sbjct: 111 KKPDKPEKSRMSTDRVDRFRR 130

Query: 152  211
           
Sbjct: 171  130

Query: 212  271
           
Sbjct: 231  130

Query: 272  275
           
Sbjct: 291  130

[Close]

BLAST of CU103655 vs. TrEMBL
Match: A0A067KMF6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13025 PE=4 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 4.9e-27
Identity = 65/81 (80.25%), Postives = 73/81 (90.12%), Query Frame = 2


Query: 32  RKFVQSLGKSKASTNGSEKAKVEIDNQNKPSETGPSDTFELAADLPEVSRNSLDSRLEKS 91
           +KFV SLGKSKA+TNGS+K  V  +NQNKPSE+G SDTFEL ADLPE+SRNSLDSRLEKS
Sbjct: 256 KKFVLSLGKSKAATNGSKKTTVS-ENQNKPSESGSSDTFELGADLPEISRNSLDSRLEKS 315

Query: 92  KKANKPEKSRMSTDRVDRFRK 151
           KK +KPEKSRMSTDRVDRFR+
Sbjct: 316 KKPDKPEKSRMSTDRVDRFRR 335

Query: 152  211
           
Sbjct: 376  335

Query: 212  271
           
Sbjct: 436  335

Query: 272  275
           
Sbjct: 496  335

[Close]

BLAST of CU103655 vs. NCBI nr
Match: gi|778694559|ref|XP_011653830.1| (PREDICTED: alpha/beta hydrolase domain-containing protein 17B [Cucumis sativus])

HSP 1 Score: 149.1 bits (375), Expect = 3.9e-33
Identity = 80/81 (98.77%), Postives = 81/81 (100.00%), Query Frame = 2


Query: 32  RKFVQSLGKSKASTNGSEKAKVEIDNQNKPSETGPSDTFELAADLPEVSRNSLDSRLEKS 91
           +KFVQSLGKSKASTNGSEKAKVEIDNQNKPSETGPSDTFELAADLPEVSRNSLDSRLEKS
Sbjct: 256 KKFVQSLGKSKASTNGSEKAKVEIDNQNKPSETGPSDTFELAADLPEVSRNSLDSRLEKS 315

Query: 92  KKANKPEKSRMSTDRVDRFRK 151
           KKANKPEKSRMSTDRVDRFRK
Sbjct: 316 KKANKPEKSRMSTDRVDRFRK 336

Query: 152  211
           
Sbjct: 376  336

Query: 212  271
           
Sbjct: 436  336

Query: 272  275
           
Sbjct: 496  336

[Close]

BLAST of CU103655 vs. NCBI nr
Match: gi|659086749|ref|XP_008444091.1| (PREDICTED: alpha/beta hydrolase domain-containing protein 17B isoform X1 [Cucumis melo])

HSP 1 Score: 149.1 bits (375), Expect = 3.9e-33
Identity = 80/81 (98.77%), Postives = 81/81 (100.00%), Query Frame = 2


Query: 32  RKFVQSLGKSKASTNGSEKAKVEIDNQNKPSETGPSDTFELAADLPEVSRNSLDSRLEKS 91
           +KFVQSLGKSKASTNGSEKAKVEIDNQNKPSETGPSDTFELAADLPEVSRNSLDSRLEKS
Sbjct: 256 KKFVQSLGKSKASTNGSEKAKVEIDNQNKPSETGPSDTFELAADLPEVSRNSLDSRLEKS 315

Query: 92  KKANKPEKSRMSTDRVDRFRK 151
           KKANKPEKSRMSTDRVDRFRK
Sbjct: 316 KKANKPEKSRMSTDRVDRFRK 336

Query: 152  211
           
Sbjct: 376  336

Query: 212  271
           
Sbjct: 436  336

Query: 272  275
           
Sbjct: 496  336

[Close]

BLAST of CU103655 vs. NCBI nr
Match: gi|590652655|ref|XP_007033206.1| (Alpha/beta-Hydrolases superfamily protein isoform 1 [Theobroma cacao])

HSP 1 Score: 122.5 bits (306), Expect = 3.9e-25
Identity = 66/81 (81.48%), Postives = 72/81 (88.89%), Query Frame = 2


Query: 32  RKFVQSLGKSKASTNGSEKAKVEIDNQNKPSETGPSDTFELAADLPEVSRNSLDSRLEKS 91
           +KFV SL KSKA+TNGSEK  V  DNQ+KPSE G SDTFEL +DLPEVSRNSLDSRLEKS
Sbjct: 256 KKFVLSLNKSKAATNGSEKTMVNSDNQSKPSEIGTSDTFELGSDLPEVSRNSLDSRLEKS 315

Query: 92  KKANKPEKSRMSTDRVDRFRK 151
           KK+NKPEKSRMSTDRVDRFR+
Sbjct: 316 KKSNKPEKSRMSTDRVDRFRR 336

Query: 152  211
           
Sbjct: 376  336

Query: 212  271
           
Sbjct: 436  336

Query: 272  275
           
Sbjct: 496  336

[Close]

BLAST of CU103655 vs. NCBI nr
Match: gi|590652658|ref|XP_007033207.1| (Alpha/beta-Hydrolases superfamily protein isoform 2 [Theobroma cacao])

HSP 1 Score: 122.5 bits (306), Expect = 3.9e-25
Identity = 66/81 (81.48%), Postives = 72/81 (88.89%), Query Frame = 2


Query: 32  RKFVQSLGKSKASTNGSEKAKVEIDNQNKPSETGPSDTFELAADLPEVSRNSLDSRLEKS 91
           +KFV SL KSKA+TNGSEK  V  DNQ+KPSE G SDTFEL +DLPEVSRNSLDSRLEKS
Sbjct: 146 KKFVLSLNKSKAATNGSEKTMVNSDNQSKPSEIGTSDTFELGSDLPEVSRNSLDSRLEKS 205

Query: 92  KKANKPEKSRMSTDRVDRFRK 151
           KK+NKPEKSRMSTDRVDRFR+
Sbjct: 206 KKSNKPEKSRMSTDRVDRFRR 226

Query: 152  211
           
Sbjct: 266  226

Query: 212  271
           
Sbjct: 326  226

Query: 272  275
           
Sbjct: 386  226

[Close]

BLAST of CU103655 vs. NCBI nr
Match: gi|643723421|gb|KDP33000.1| (hypothetical protein JCGZ_13031 [Jatropha curcas])

HSP 1 Score: 119.8 bits (299), Expect = 2.5e-24
Identity = 65/81 (80.25%), Postives = 74/81 (91.36%), Query Frame = 2


Query: 32  RKFVQSLGKSKASTNGSEKAKVEIDNQNKPSETGPSDTFELAADLPEVSRNSLDSRLEKS 91
           +KFV SLGKSKA+TNGS+K  V ++NQNKPSE+G SDTFEL ADLPE+SRNSLDSRLEKS
Sbjct: 51  KKFVLSLGKSKAATNGSKKTTV-LENQNKPSESGTSDTFELGADLPEISRNSLDSRLEKS 110

Query: 92  KKANKPEKSRMSTDRVDRFRK 151
           KK +KPEKSRMSTDRVDRFR+
Sbjct: 111 KKPDKPEKSRMSTDRVDRFRR 130

Query: 152  211
           
Sbjct: 171  130

Query: 212  271
           
Sbjct: 231  130

Query: 272  275
           
Sbjct: 291  130

The following BLAST results are available for this feature:

BLAST of CU103655 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L0Q0_CUCSA	3.4e-36	98.77	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G410820 PE=4 SV=1	[more]
A0A061EI99_THECC	3.4e-28	81.48	Alpha/beta-Hydrolases superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_01...	[more]
A0A061EHM1_THECC	3.4e-28	81.48	Alpha/beta-Hydrolases superfamily protein isoform 2 OS=Theobroma cacao GN=TCM_01...	[more]
A0A067KL51_JATCU	2.9e-27	80.25	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13031 PE=4 SV=1	[more]
A0A067KMF6_JATCU	4.9e-27	80.25	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13025 PE=4 SV=1	[more]

BLAST of CU103655 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778694559\|ref\|XP_011653830.1\|	3.9e-33	98.77	PREDICTED: alpha/beta hydrolase domain-containing protein 17B [Cucumis sativus]	[more]
gi\|659086749\|ref\|XP_008444091.1\|	3.9e-33	98.77	PREDICTED: alpha/beta hydrolase domain-containing protein 17B isoform X1 [Cucumi...	[more]
gi\|590652655\|ref\|XP_007033206.1\|	3.9e-25	81.48	Alpha/beta-Hydrolases superfamily protein isoform 1 [Theobroma cacao]	[more]
gi\|590652658\|ref\|XP_007033207.1\|	3.9e-25	81.48	Alpha/beta-Hydrolases superfamily protein isoform 2 [Theobroma cacao]	[more]
gi\|643723421\|gb\|KDP33000.1\|	2.5e-24	80.25	hypothetical protein JCGZ_13031 [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
Csa4G410820	Csa4G410820	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
FKNP3UI02ODFNZ	FKNP3UI02ODFNZ	EST
G0108589	G0108589	EST
H0080873	H0080873	EST

InterPro

Analysis Name: InterPro Annotations of cucumber unigene v3
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR12277	UNCHARACTERIZED	coord: 2..91 score: 1.7
None	No IPR available	PANTHER	PTHR12277:SF83	ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN	coord: 2..91 score: 1.7