CU102839 (transcribed_cluster) Cucumber (Chinese Long) v2

Overview
NameCU102839
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr6 : 20796587 .. 20796900 (-)
Sequence length316
Genome Viewer
Sequences
The following sequences are available for this feature:

transcribed_cluster sequence

CTTTAATCAAAACGAAGGTGATTTTATTCACTTATATTATTATCTCTCAATTCTCAATCAAACCCAGCAAAAAACCTACATGTGTACATCAAATTTCCAATTTTGTACTAATTTAGAAGCAAAGGGTAGTTGGTGAGACAAAAACTAAAAAGAGGCTAATTTTCTGGCAGTGGAATCTCACCGAGAAGCTAATGACCAAAAGTTCAAGAGAAACGAAGGAGAAACAGCAAACCAGCTAATGAAAGCCATTGCAGTGGCGGACTCAAACTGTGCACAGTGGTTCACGCCACACTTGTTAAGGTCATTGCCTATAAGA
Homology
[Close]
BLAST of CU102839 vs. Swiss-Prot
Match: CSPLT_ORYSJ (CASP-like protein 5A2 OS=Oryza sativa subsp. japonica GN=Os10g0343200 PE=2 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 3.5e-14
Identity = 35/45 (77.78%), Postives = 38/45 (84.44%), Query Frame = -2 

Query: 181 LIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR 240
           LIGNDLN C  NHCA FE+ATAMAFISWFA++PS +LNFWS+ASR
Sbjct: 159 LIGNDLNICANNHCASFETATAMAFISWFALAPSCVLNFWSMASR 203

Query: 241  300
           
Sbjct: 219  203

Query: 301  316
           
Sbjct: 279  203

[Close]
BLAST of CU102839 vs. Swiss-Prot
Match: CSPLV_ORYSJ (CASP-like protein 5A1 OS=Oryza sativa subsp. japonica GN=Os03g0206600 PE=2 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 3.5e-14
Identity = 35/44 (79.55%), Postives = 37/44 (84.09%), Query Frame = -2 

Query: 184 LIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLAS 243
           LI NDL+ C  NHCA FESATAMAF+SWFA+SPSFLLNFWS+AS
Sbjct: 134 LIDNDLDLCSENHCASFESATAMAFLSWFALSPSFLLNFWSMAS 177

Query: 244  303
           
Sbjct: 194  177

Query: 304  316
           
Sbjct: 254  177

[Close]
BLAST of CU102839 vs. Swiss-Prot
Match: CSPLT_ORYSI (CASP-like protein 5A2 OS=Oryza sativa subsp. indica GN=OsI_33147 PE=3 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 3.5e-14
Identity = 35/45 (77.78%), Postives = 38/45 (84.44%), Query Frame = -2 

Query: 181 LIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR 240
           LIGNDLN C  NHCA FE+ATAMAFISWFA++PS +LNFWS+ASR
Sbjct: 159 LIGNDLNICANNHCASFETATAMAFISWFALAPSCVLNFWSMASR 203

Query: 241  300
           
Sbjct: 219  203

Query: 301  316
           
Sbjct: 279  203

[Close]
BLAST of CU102839 vs. Swiss-Prot
Match: CSPLK_MAIZE (CASP-like protein 5A3 OS=Zea mays PE=2 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 4.6e-14
Identity = 34/45 (75.56%), Postives = 38/45 (84.44%), Query Frame = -2 

Query: 181 LIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR 240
           LIGNDLN C  NHCA FE+ATA+AFISWFA++PS +LNFWS+ASR
Sbjct: 146 LIGNDLNICAENHCASFETATALAFISWFALAPSCILNFWSMASR 190

Query: 241  300
           
Sbjct: 206  190

Query: 301  316
           
Sbjct: 266  190

[Close]
BLAST of CU102839 vs. Swiss-Prot
Match: CSPL6_ARATH (CASP-like protein 5A2 OS=Arabidopsis thaliana GN=At2g28370 PE=2 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 7.9e-14
Identity = 34/45 (75.56%), Postives = 35/45 (77.78%), Query Frame = -2 

Query: 181 LIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR 240
           LI NDLN C  NHC QFE++TA+AFISWFA  PSFL NFWSLASR
Sbjct: 135 LIDNDLNSCAQNHCVQFETSTALAFISWFAALPSFLFNFWSLASR 179

Query: 241  300
           
Sbjct: 195  179

Query: 301  316
           
Sbjct: 255  179

[Close]
BLAST of CU102839 vs. TrEMBL
Match: A0A0A0KF35_CUCSA (CASP-like protein OS=Cucumis sativus GN=Csa_6G445220 PE=3 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 1.1e-17
Identity = 45/45 (100.00%), Postives = 45/45 (100.00%), Query Frame = -2 

Query: 181 LIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR 240
           LIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR
Sbjct: 135 LIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR 179

Query: 241  300
           
Sbjct: 195  179

Query: 301  316
           
Sbjct: 255  179

[Close]
BLAST of CU102839 vs. TrEMBL
Match: M5WCK6_PRUPE (CASP-like protein OS=Prunus persica GN=PRUPE_ppa010839mg PE=3 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 8.5e-15
Identity = 40/45 (88.89%), Postives = 42/45 (93.33%), Query Frame = -2 

Query: 181 LIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR 240
           LI NDLNKC VNHC +FE+ATAMAFISWFAVSPSFLLNFWSLASR
Sbjct: 135 LIANDLNKCDVNHCKRFETATAMAFISWFAVSPSFLLNFWSLASR 179

Query: 241  300
           
Sbjct: 195  179

Query: 301  316
           
Sbjct: 255  179

[Close]
BLAST of CU102839 vs. TrEMBL
Match: M5VZW4_PRUPE (CASP-like protein OS=Prunus persica GN=PRUPE_ppa010839mg PE=3 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 8.5e-15
Identity = 40/45 (88.89%), Postives = 42/45 (93.33%), Query Frame = -2 

Query: 181 LIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR 240
           LI NDLNKC VNHC +FE+ATAMAFISWFAVSPSFLLNFWSLASR
Sbjct: 189 LIANDLNKCDVNHCKRFETATAMAFISWFAVSPSFLLNFWSLASR 233

Query: 241  300
           
Sbjct: 249  233

Query: 301  316
           
Sbjct: 309  233

[Close]
BLAST of CU102839 vs. TrEMBL
Match: A0A059A7F2_EUCGR (CASP-like protein OS=Eucalyptus grandis GN=EUGRSUZ_K03250 PE=3 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 2.5e-14
Identity = 38/45 (84.44%), Postives = 41/45 (91.11%), Query Frame = -2 

Query: 181 LIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR 240
           LIGNDLN+C VNHCA+FESATAMAFISWF  SPSFL NFWSLAS+
Sbjct: 77  LIGNDLNRCAVNHCARFESATAMAFISWFVASPSFLFNFWSLASQ 121

Query: 241  300
           
Sbjct: 137  121

Query: 301  316
           
Sbjct: 197  121

[Close]
BLAST of CU102839 vs. TrEMBL
Match: A0A067K9Z9_JATCU (CASP-like protein OS=Jatropha curcas GN=JCGZ_16504 PE=3 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 2.5e-14
Identity = 36/45 (80.00%), Postives = 44/45 (97.78%), Query Frame = -2 

Query: 181 LIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR 240
           LIGNDLNKC +NHC++FE+ATAMAFISWFA++PSFL+NFWSLAS+
Sbjct: 134 LIGNDLNKCSINHCSRFETATAMAFISWFAMTPSFLMNFWSLASQ 178

Query: 241  300
           
Sbjct: 194  178

Query: 301  316
           
Sbjct: 254  178

[Close]
BLAST of CU102839 vs. NCBI nr
Match: gi|449451006|ref|XP_004143253.1| (PREDICTED: CASP-like protein 5A2 [Cucumis sativus])

HSP 1 Score: 97.4 bits (241), Expect = 1.5e-17
Identity = 45/45 (100.00%), Postives = 45/45 (100.00%), Query Frame = -2 

Query: 181 LIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR 240
           LIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR
Sbjct: 135 LIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR 179

Query: 241  300
           
Sbjct: 195  179

Query: 301  316
           
Sbjct: 255  179

[Close]
BLAST of CU102839 vs. NCBI nr
Match: gi|645277787|ref|XP_008243939.1| (PREDICTED: CASP-like protein 2 [Prunus mume])

HSP 1 Score: 87.8 bits (216), Expect = 1.2e-14
Identity = 40/45 (88.89%), Postives = 42/45 (93.33%), Query Frame = -2 

Query: 181 LIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR 240
           LI NDLNKC VNHC +FE+ATAMAFISWFAVSPSFLLNFWSLASR
Sbjct: 214 LIANDLNKCDVNHCKRFETATAMAFISWFAVSPSFLLNFWSLASR 258

Query: 241  300
           
Sbjct: 274  258

Query: 301  316
           
Sbjct: 334  258

[Close]
BLAST of CU102839 vs. NCBI nr
Match: gi|595829163|ref|XP_007205818.1| (hypothetical protein PRUPE_ppa010839mg [Prunus persica])

HSP 1 Score: 87.8 bits (216), Expect = 1.2e-14
Identity = 40/45 (88.89%), Postives = 42/45 (93.33%), Query Frame = -2 

Query: 181 LIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR 240
           LI NDLNKC VNHC +FE+ATAMAFISWFAVSPSFLLNFWSLASR
Sbjct: 189 LIANDLNKCDVNHCKRFETATAMAFISWFAVSPSFLLNFWSLASR 233

Query: 241  300
           
Sbjct: 249  233

Query: 301  316
           
Sbjct: 309  233

[Close]
BLAST of CU102839 vs. NCBI nr
Match: gi|595829168|ref|XP_007205819.1| (hypothetical protein PRUPE_ppa010839mg [Prunus persica])

HSP 1 Score: 87.8 bits (216), Expect = 1.2e-14
Identity = 40/45 (88.89%), Postives = 42/45 (93.33%), Query Frame = -2 

Query: 181 LIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR 240
           LI NDLNKC VNHC +FE+ATAMAFISWFAVSPSFLLNFWSLASR
Sbjct: 135 LIANDLNKCDVNHCKRFETATAMAFISWFAVSPSFLLNFWSLASR 179

Query: 241  300
           
Sbjct: 195  179

Query: 301  316
           
Sbjct: 255  179

[Close]
BLAST of CU102839 vs. NCBI nr
Match: gi|694318491|ref|XP_009342901.1| (PREDICTED: CASP-like protein Os03g0206600 [Pyrus x bretschneideri])

HSP 1 Score: 87.4 bits (215), Expect = 1.6e-14
Identity = 39/45 (86.67%), Postives = 42/45 (93.33%), Query Frame = -2 

Query: 181 LIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR 240
           LI NDLNKCG NHC +FE+ATAMAFISWFAVSP+FLLNFWSLASR
Sbjct: 135 LIANDLNKCGFNHCKRFETATAMAFISWFAVSPTFLLNFWSLASR 179

Query: 241  300
           
Sbjct: 195  179

Query: 301  316
           
Sbjct: 255  179

The following BLAST results are available for this feature:
BLAST of CU102839 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CSPLT_ORYSJ3.5e-1477.78CASP-like protein 5A2 OS=Oryza sativa subsp. japonica GN=Os10g0343200 PE=2 SV=1[more]
CSPLV_ORYSJ3.5e-1479.55CASP-like protein 5A1 OS=Oryza sativa subsp. japonica GN=Os03g0206600 PE=2 SV=1[more]
CSPLT_ORYSI3.5e-1477.78CASP-like protein 5A2 OS=Oryza sativa subsp. indica GN=OsI_33147 PE=3 SV=1[more]
CSPLK_MAIZE4.6e-1475.56CASP-like protein 5A3 OS=Zea mays PE=2 SV=1[more]
CSPL6_ARATH7.9e-1475.56CASP-like protein 5A2 OS=Arabidopsis thaliana GN=At2g28370 PE=2 SV=1[more]
BLAST of CU102839 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KF35_CUCSA1.1e-17100.00CASP-like protein OS=Cucumis sativus GN=Csa_6G445220 PE=3 SV=1[more]
M5WCK6_PRUPE8.5e-1588.89CASP-like protein OS=Prunus persica GN=PRUPE_ppa010839mg PE=3 SV=1[more]
M5VZW4_PRUPE8.5e-1588.89CASP-like protein OS=Prunus persica GN=PRUPE_ppa010839mg PE=3 SV=1[more]
A0A059A7F2_EUCGR2.5e-1484.44CASP-like protein OS=Eucalyptus grandis GN=EUGRSUZ_K03250 PE=3 SV=1[more]
A0A067K9Z9_JATCU2.5e-1480.00CASP-like protein OS=Jatropha curcas GN=JCGZ_16504 PE=3 SV=1[more]
BLAST of CU102839 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449451006|ref|XP_004143253.1|1.5e-17100.00PREDICTED: CASP-like protein 5A2 [Cucumis sativus][more]
gi|645277787|ref|XP_008243939.1|1.2e-1488.89PREDICTED: CASP-like protein 2 [Prunus mume][more]
gi|595829163|ref|XP_007205818.1|1.2e-1488.89hypothetical protein PRUPE_ppa010839mg [Prunus persica][more]
gi|595829168|ref|XP_007205819.1|1.2e-1488.89hypothetical protein PRUPE_ppa010839mg [Prunus persica][more]
gi|694318491|ref|XP_009342901.1|1.6e-1486.67PREDICTED: CASP-like protein Os03g0206600 [Pyrus x bretschneideri][more]
Relationships

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa6G445220Csa6G445220gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
G0044687G0044687EST
G0095522G0095522EST
G0130420G0130420EST
G0132850G0132850EST
G0184255G0184255EST
G0190053G0190053EST
H0166915H0166915EST