CU101737 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU101737
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr6 : 18935407 .. 18936257 (-)
Sequence length862
The following sequences are available for this feature:

transcribed_cluster sequence

AGAAGAAGACGAGATGTATATCTACTCATTCATTCACAAGGCTAAGCAAGAAAAGCTTAGAGATGTGCACAGAAAAGCTTAGGCAGCGAGAGCGGAAGCAACATGGGAGAGAACGACATCTCTTTATCAACATTGATATCAGACGAGGATTTTCGCTCCAACGTCAGACGAAATTCAACATTATCATCTCACAGGAAAGCCATTAGAAAATACACCACATATCCACCTCCATTAACATCAATAAGTGGCTCCACTAAACGTCAGAGTCGAGTCCTACCGAAAAGATGGACGACTGGTATTGTAGAGCCATGGTATGTTCTACTTCTTCCCCATTAGCTACTTCCAAGCAGAACGTAGCCATGGGAGACTTAAAACTTCAGCTTGTGAAACAAATTGAAAAGAGAGGTGAAGAAGATGGAGATGATCAGGAAGTTGAAGAAGAACTCAACTTGGTTGATGATGATGTAGAAGAAATGGGAATGGAAAGTTTTGGAAGGCCACTCAGTTGCAGCAATAGCAGATGCAAAACAAGACAGGCACCAGAGCAAAAGAGTTGCTCAATTGGGAGCCACTATGGGTTGCTACTTAATTACTGATTAATCAATAGATTAAGATCTCTAATTATGATTTCTTAAGTAAAATTATCACCTCATTTCTACTTCTAAAATCTTCCCTTTTTCCCATTTTCCATTGTATCTTAAATCTCATCCAACAAAGGTAAGTGGGTTTTGATGAGGTTATTACCGCTAAGTTCACACCCTGGCAGCTGCTTAAGAGTTAGTTAAGTTAGTTATATAACACTTTTCCTTGCATTCATATATGTGTAGATTTTGAAAATTCAGAGTGAAAATGTAATCAAGAA
BLAST of CU101737 vs. TrEMBL
Match: A0A0A0KEC5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G410040 PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.4e-24
Identity = 61/70 (87.14%), Postives = 65/70 (92.86%), Query Frame = 1

Query: 46  ARKA*RCAQKSLGSESGSNMGENDISLSTLISDEDFRSNVRRNSTLSSHRKAIRKYTTYP 105
           ++K+     +SLGSESGSNMGENDISLSTLISDEDFRSNVRRNSTLSSHRKAIRKYTTYP
Sbjct: 83  SKKSLEMCTESLGSESGSNMGENDISLSTLISDEDFRSNVRRNSTLSSHRKAIRKYTTYP 142

Query: 106 PPLTSISGST 165
           PPLTSISGST
Sbjct: 143 PPLTSISGST 152

Query: 166 225
           
Sbjct: 203 152

Query: 226 256
           
Sbjct: 263 152

BLAST of CU101737 vs. TrEMBL
Match: A0A0A0KEC5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G410040 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.9e-08
Identity = 40/75 (53.33%), Postives = 44/75 (58.67%), Query Frame = 3

Query: 303 RAMVCSTSSPLATSKQNVAMGDLKLQLVKQIEKRXXXXXXXXXXXXXXXXXXXXXXXMGM 362
           RAMVCSTS P++  +   + G LKLQLVKQIEKR                       MGM
Sbjct: 168 RAMVCSTS-PISYFQAERSHGRLKLQLVKQIEKRGEEDGDDQEVEEELNLVDDDVEEMGM 227

Query: 363 ESFGRPLSCSNSRCK 422
           ESFGRPLSCSNSRCK
Sbjct: 228 ESFGRPLSCSNSRCK 241

Query: 423 482
           
Sbjct: 288 241

Query: 483 528
           
Sbjct: 348 241


HSP 2 Score: 40.0 bits (92), Expect = 5.5e+00
Identity = 18/19 (94.74%), Postives = 18/19 (94.74%), Query Frame = 3

Query: 24 THSFTRLSKKSLEMCTEKL 81
          THSFTRLSKKSLEMCTE L
Sbjct: 76 THSFTRLSKKSLEMCTESL 94

BLAST of CU101737 vs. NCBI nr
Match: gi|700192694|gb|KGN47898.1| (hypothetical protein Csa_6G410040 [Cucumis sativus])

HSP 1 Score: 117.1 bits (292), Expect = 5.1e-23
Identity = 61/70 (87.14%), Postives = 65/70 (92.86%), Query Frame = 1

Query: 46  ARKA*RCAQKSLGSESGSNMGENDISLSTLISDEDFRSNVRRNSTLSSHRKAIRKYTTYP 105
           ++K+     +SLGSESGSNMGENDISLSTLISDEDFRSNVRRNSTLSSHRKAIRKYTTYP
Sbjct: 83  SKKSLEMCTESLGSESGSNMGENDISLSTLISDEDFRSNVRRNSTLSSHRKAIRKYTTYP 142

Query: 106 PPLTSISGST 165
           PPLTSISGST
Sbjct: 143 PPLTSISGST 152

Query: 166 225
           
Sbjct: 203 152

Query: 226 256
           
Sbjct: 263 152

BLAST of CU101737 vs. NCBI nr
Match: gi|659097108|ref|XP_008449447.1| (PREDICTED: protein FANTASTIC FOUR 2-like [Cucumis melo])

HSP 1 Score: 107.1 bits (266), Expect = 5.3e-20
Identity = 56/70 (80.00%), Postives = 61/70 (87.14%), Query Frame = 1

Query: 46  ARKA*RCAQKSLGSESGSNMGENDISLSTLISDEDFRSNVRRNSTLSSHRKAIRKYTTYP 105
           ++K+     +SLGSESGSNMGENDISL TLISDEDFR+NVR NST SSHRK IRKYTTYP
Sbjct: 83  SKKSLEMCTESLGSESGSNMGENDISLLTLISDEDFRANVRPNSTSSSHRKVIRKYTTYP 142

Query: 106 PPLTSISGST 165
           PPLTSISGST
Sbjct: 143 PPLTSISGST 152

Query: 166 225
           
Sbjct: 203 152

Query: 226 256
           
Sbjct: 263 152

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0KEC5_CUCSA1.4e-2487.14Uncharacterized protein OS=Cucumis sativus GN=Csa_6G410040 PE=4 SV=1[more]
A0A0A0KEC5_CUCSA1.9e-0853.33Uncharacterized protein OS=Cucumis sativus GN=Csa_6G410040 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700192694|gb|KGN47898.1|5.1e-2387.14hypothetical protein Csa_6G410040 [Cucumis sativus][more]
gi|659097108|ref|XP_008449447.1|5.3e-2080.00PREDICTED: protein FANTASTIC FOUR 2-like [Cucumis melo][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa6G410040Csa6G410040gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
G0025212G0025212EST
G0073551G0073551EST
G0158015G0158015EST
G0174178G0174178EST
G0184403G0184403EST
G0198883G0198883EST
H0112531H0112531EST
H0159632H0159632EST
H0180587H0180587EST