CU098950 (transcribed_cluster) Cucumber (Chinese Long) v2

Overview
NameCU098950
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr6 : 9119019 .. 9119329 (+)
Sequence length313
Genome Viewer
Sequences
The following sequences are available for this feature:

transcribed_cluster sequence

GCTTTGAAGAAGAAGAAGAAGAAGATGAAGAAGATCAGGTGAATGAATCCATGTAGAAATGGGTGTTGTTGAGTGGGGGGGCTGTGGTTAGCCACGACGAATGGCAGTAAAGTAGTTGAAATCGTGGTGTTGGACCCTAAGTTGCTTTAGCCAAGAATCAGCCACGCTCAATAGAGACATCAATCTTTCTTGGTCCCTCCCATAATTACCAGAAATCCACACGTTTCCTTGCATCTTGTATGTGGCTAAAACCAAATGCTGCCAGCGATATCCCCTTCCCCTGCTTTTCTCTTCTTTTCTCCACTTTCAAATT
Homology
[Close]
BLAST of CU098950 vs. TrEMBL
Match: A0A0A0KG73_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G128660 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 2.2e-23
Identity = 55/69 (79.71%), Postives = 59/69 (85.51%), Query Frame = -2 

Query: 91  KEEKSRGRGYRWQHLVLATYKMQGNVWISGNYGRDQERLMSLLSVADSWLKQLRVQHHDF 150
           ++++  G G       LATYKMQGNVWISGNYGRDQERLMSLLSVADSWLKQLRVQHHDF
Sbjct: 248 EKKRKEGEGISLAAFGLATYKMQGNVWISGNYGRDQERLMSLLSVADSWLKQLRVQHHDF 307

Query: 151 NYFTAIRRG 210
           NYFTAIRRG
Sbjct: 308 NYFTAIRRG 316

Query: 211  270
           
Sbjct: 368  316

Query: 271  298
           
Sbjct: 428  316

[Close]
BLAST of CU098950 vs. TrEMBL
Match: M5WXB2_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa008669m1g PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 2.7e-21
Identity = 51/69 (73.91%), Postives = 57/69 (82.61%), Query Frame = -2 

Query: 91  KEEKSRGRGYRWQHLVLATYKMQGNVWISGNYGRDQERLMSLLSVADSWLKQLRVQHHDF 150
           + ++ +G         LATYKMQGNVW+SGN GRDQERLMSLLSVADSWLKQLRVQHHD+
Sbjct: 72  QRKRKKGESISLPPFGLATYKMQGNVWVSGNCGRDQERLMSLLSVADSWLKQLRVQHHDY 131

Query: 151 NYFTAIRRG 210
           NYFTAIRRG
Sbjct: 132 NYFTAIRRG 140

Query: 211  270
           
Sbjct: 192  140

Query: 271  298
           
Sbjct: 252  140

[Close]
BLAST of CU098950 vs. TrEMBL
Match: A0A061E2V2_THECC (F21B7.22 OS=Theobroma cacao GN=TCM_008030 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 2.7e-21
Identity = 51/69 (73.91%), Postives = 56/69 (81.16%), Query Frame = -2 

Query: 91  KEEKSRGRGYRWQHLVLATYKMQGNVWISGNYGRDQERLMSLLSVADSWLKQLRVQHHDF 150
           + ++  G G       LATYKMQGNVW+SGN GRDQER+MSLLSVADSWLKQLRVQHHDF
Sbjct: 248 ERKRKEGEGISLPPFGLATYKMQGNVWVSGNCGRDQERVMSLLSVADSWLKQLRVQHHDF 307

Query: 151 NYFTAIRRG 210
           NYFT IRRG
Sbjct: 308 NYFTGIRRG 316

Query: 211  270
           
Sbjct: 368  316

Query: 271  298
           
Sbjct: 428  316

[Close]
BLAST of CU098950 vs. TrEMBL
Match: A0A0D2NG02_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G204000 PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 3.5e-21
Identity = 51/69 (73.91%), Postives = 56/69 (81.16%), Query Frame = -2 

Query: 91  KEEKSRGRGYRWQHLVLATYKMQGNVWISGNYGRDQERLMSLLSVADSWLKQLRVQHHDF 150
           + ++  G G       LATYKMQGNVW+SGN GRDQERL+SLLSVADSWLKQLRVQHHDF
Sbjct: 248 ERKRKEGEGISLPPFGLATYKMQGNVWVSGNSGRDQERLVSLLSVADSWLKQLRVQHHDF 307

Query: 151 NYFTAIRRG 210
           NYFT IRRG
Sbjct: 308 NYFTGIRRG 316

Query: 211  270
           
Sbjct: 368  316

Query: 271  298
           
Sbjct: 428  316

[Close]
BLAST of CU098950 vs. TrEMBL
Match: V4TJE8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10015991mg PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.3e-20
Identity = 50/69 (72.46%), Postives = 55/69 (79.71%), Query Frame = -2 

Query: 91  KEEKSRGRGYRWQHLVLATYKMQGNVWISGNYGRDQERLMSLLSVADSWLKQLRVQHHDF 150
           + ++  G G       LATYKMQGNVW+SGN GRDQERL+SLLSVADSWLKQLRVQHHDF
Sbjct: 247 ERKRKEGEGISLPPFGLATYKMQGNVWVSGNCGRDQERLVSLLSVADSWLKQLRVQHHDF 306

Query: 151 NYFTAIRRG 210
           NYF  IRRG
Sbjct: 307 NYFVGIRRG 315

Query: 211  270
           
Sbjct: 367  315

Query: 271  298
           
Sbjct: 427  315

[Close]
BLAST of CU098950 vs. NCBI nr
Match: gi|449444342|ref|XP_004139934.1| (PREDICTED: uncharacterized protein LOC101222318 [Cucumis sativus])

HSP 1 Score: 119.0 bits (297), Expect = 4.9e-24
Identity = 55/69 (79.71%), Postives = 59/69 (85.51%), Query Frame = -2 

Query: 91  KEEKSRGRGYRWQHLVLATYKMQGNVWISGNYGRDQERLMSLLSVADSWLKQLRVQHHDF 150
           ++++  G G       LATYKMQGNVWISGNYGRDQERLMSLLSVADSWLKQLRVQHHDF
Sbjct: 248 EKKRKEGEGISLAAFGLATYKMQGNVWISGNYGRDQERLMSLLSVADSWLKQLRVQHHDF 307

Query: 151 NYFTAIRRG 210
           NYFTAIRRG
Sbjct: 308 NYFTAIRRG 316

Query: 211  270
           
Sbjct: 368  316

Query: 271  298
           
Sbjct: 428  316

[Close]
BLAST of CU098950 vs. NCBI nr
Match: gi|659094859|ref|XP_008448279.1| (PREDICTED: uncharacterized protein LOC103490514 [Cucumis melo])

HSP 1 Score: 119.0 bits (297), Expect = 4.9e-24
Identity = 55/69 (79.71%), Postives = 59/69 (85.51%), Query Frame = -2 

Query: 91  KEEKSRGRGYRWQHLVLATYKMQGNVWISGNYGRDQERLMSLLSVADSWLKQLRVQHHDF 150
           ++++  G G       LATYKMQGNVWISGNYGRDQERLMSLLSVADSWLKQLRVQHHDF
Sbjct: 248 EKKRKEGEGISLAAFGLATYKMQGNVWISGNYGRDQERLMSLLSVADSWLKQLRVQHHDF 307

Query: 151 NYFTAIRRG 210
           NYFTAIRRG
Sbjct: 308 NYFTAIRRG 316

Query: 211  270
           
Sbjct: 368  316

Query: 271  298
           
Sbjct: 428  316

[Close]
BLAST of CU098950 vs. NCBI nr
Match: gi|694332913|ref|XP_009357071.1| (PREDICTED: uncharacterized protein LOC103947831 [Pyrus x bretschneideri])

HSP 1 Score: 114.8 bits (286), Expect = 9.2e-23
Identity = 51/69 (73.91%), Postives = 60/69 (86.96%), Query Frame = -2 

Query: 91  KEEKSRGRGYRWQHLVLATYKMQGNVWISGNYGRDQERLMSLLSVADSWLKQLRVQHHDF 150
           ++++ +G G       LATYKMQGNVW+SGN+G+D+ERLMSLLSVADSWLKQLRVQHHDF
Sbjct: 249 QQKRKKGGGISLPPFGLATYKMQGNVWVSGNFGKDRERLMSLLSVADSWLKQLRVQHHDF 308

Query: 151 NYFTAIRRG 210
           NYFTAIRRG
Sbjct: 309 NYFTAIRRG 317

Query: 211  270
           
Sbjct: 369  317

Query: 271  298
           
Sbjct: 429  317

[Close]
BLAST of CU098950 vs. NCBI nr
Match: gi|658025429|ref|XP_008348115.1| (PREDICTED: uncharacterized protein LOC103411248 [Malus domestica])

HSP 1 Score: 113.6 bits (283), Expect = 2.1e-22
Identity = 51/69 (73.91%), Postives = 59/69 (85.51%), Query Frame = -2 

Query: 91  KEEKSRGRGYRWQHLVLATYKMQGNVWISGNYGRDQERLMSLLSVADSWLKQLRVQHHDF 150
           ++++ +G G       LATYKMQGNVW+SGN G+DQERLMSLLSVADSWLKQLRV+HHDF
Sbjct: 250 QQKRKKGEGISLPPFGLATYKMQGNVWVSGNCGKDQERLMSLLSVADSWLKQLRVKHHDF 309

Query: 151 NYFTAIRRG 210
           NYFTAIRRG
Sbjct: 310 NYFTAIRRG 318

Query: 211  270
           
Sbjct: 370  318

Query: 271  298
           
Sbjct: 430  318

[Close]
BLAST of CU098950 vs. NCBI nr
Match: gi|1009127339|ref|XP_015880646.1| (PREDICTED: uncharacterized protein LOC107416641 [Ziziphus jujuba])

HSP 1 Score: 112.8 bits (281), Expect = 3.5e-22
Identity = 51/69 (73.91%), Postives = 57/69 (82.61%), Query Frame = -2 

Query: 91  KEEKSRGRGYRWQHLVLATYKMQGNVWISGNYGRDQERLMSLLSVADSWLKQLRVQHHDF 150
           ++++  G G       LATYKMQGNVW+SGN GRDQERL+SLLSVADSWLKQLRVQHHDF
Sbjct: 253 RKQRKEGEGISLPPFGLATYKMQGNVWVSGNCGRDQERLVSLLSVADSWLKQLRVQHHDF 312

Query: 151 NYFTAIRRG 210
           NYFT IRRG
Sbjct: 313 NYFTGIRRG 321

Query: 211  270
           
Sbjct: 373  321

Query: 271  298
           
Sbjct: 433  321

The following BLAST results are available for this feature:
BLAST of CU098950 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KG73_CUCSA2.2e-2379.71Uncharacterized protein OS=Cucumis sativus GN=Csa_6G128660 PE=4 SV=1[more]
M5WXB2_PRUPE2.7e-2173.91Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa008669m1g PE=4 ... [more]
A0A061E2V2_THECC2.7e-2173.91F21B7.22 OS=Theobroma cacao GN=TCM_008030 PE=4 SV=1[more]
A0A0D2NG02_GOSRA3.5e-2173.91Uncharacterized protein OS=Gossypium raimondii GN=B456_005G204000 PE=4 SV=1[more]
V4TJE8_9ROSI1.3e-2072.46Uncharacterized protein OS=Citrus clementina GN=CICLE_v10015991mg PE=4 SV=1[more]
BLAST of CU098950 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449444342|ref|XP_004139934.1|4.9e-2479.71PREDICTED: uncharacterized protein LOC101222318 [Cucumis sativus][more]
gi|659094859|ref|XP_008448279.1|4.9e-2479.71PREDICTED: uncharacterized protein LOC103490514 [Cucumis melo][more]
gi|694332913|ref|XP_009357071.1|9.2e-2373.91PREDICTED: uncharacterized protein LOC103947831 [Pyrus x bretschneideri][more]
gi|658025429|ref|XP_008348115.1|2.1e-2273.91PREDICTED: uncharacterized protein LOC103411248 [Malus domestica][more]
gi|1009127339|ref|XP_015880646.1|3.5e-2273.91PREDICTED: uncharacterized protein LOC107416641 [Ziziphus jujuba][more]
Relationships

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa6G128660Csa6G128660gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
FKNP3UI02LSF1XFKNP3UI02LSF1XEST
FKNP3UI02OKX24FKNP3UI02OKX24EST
G0048730G0048730EST
G0118111G0118111EST
G0158516G0158516EST
G0173291G0173291EST
H0125472H0125472EST