CU098244 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU098244
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr4 : 6411098 .. 6411701 (-)
Sequence length479
The following sequences are available for this feature:

transcribed_cluster sequence

GTTACTCTTATTTAAGAAAGTAAAAGAGTAAAATTGGTAAAAGAAGTAGGGGTAAAAGGTAATAATGTATGGTTCATGAAGGATTACATGTATAGCCCAAAAGAAAGCCAACTCCAACAACACTCAAACAAATAGCCAAAAGCCCCAAAACCCCATTTCATTCCTCCATTTCCACCATTCTTTATCACTTTCTTCTTCCTCTTCTTCCTCTTCTTCCTCTTCTTGTTTCTGCAACTTGAAAACCCTGAGCTCCAGCAATTTGAGGGATTGTCGATAACAGAACACCATTCTGGCCTCGTCTTCAAAAGCCCTACTAATACAATCCCTTTCCTCCATCAATTTTGCCGCCTTCCTCTCCGCCTCTCTTGCCCTCGTTTGCGACAGTCTCAGAGCCTTCAACAGCTCCATTTTTTCCCCATCCCACTCTTGAATACCTTCTGCGGCGGCGGAAGATCGCAATTCCTAATTGCTCAACCCCG
BLAST of CU098244 vs. TrEMBL
Match: A0A0A0KZ57_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G097690 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 3.4e-15
Identity = 48/64 (75.00%), Postives = 48/64 (75.00%), Query Frame = -3

Query: 223 EKMELLKALRLSQTXXXXXXXXXXXXXXXXDCISRAFEDEARMVFCYRQSLKLLELRVFK 282
           EKMELLKALRLSQT                DCISRAFEDEARMVFCYRQSLKLLELRVFK
Sbjct: 44  EKMELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARMVFCYRQSLKLLELRVFK 103

Query: 283 LQKQ 342
           LQKQ
Sbjct: 104 LQKQ 107

Query: 343 402
           
Sbjct: 164 107

Query: 403 415
           
Sbjct: 224 107

BLAST of CU098244 vs. TrEMBL
Match: A0A0A0KZ57_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G097690 PE=4 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 1.9e-02
Identity = 21/21 (100.00%), Postives = 21/21 (100.00%), Query Frame = -2

Query: 77  LAICLSVVGVGFLLGYTCNPS 136
           LAICLSVVGVGFLLGYTCNPS
Sbjct: 176 LAICLSVVGVGFLLGYTCNPS 196

Query: 137 140
           
Sbjct: 236 196


HSP 2 Score: 42.7 bits (99), Expect = 4.7e-01
Identity = 18/20 (90.00%), Postives = 19/20 (95.00%), Query Frame = -1

Query: 408 IRNCDLPPPQKVFKSGMGKK 467
           IRNCDLPPPQKVFKSGM +K
Sbjct: 26  IRNCDLPPPQKVFKSGMEEK 45

BLAST of CU098244 vs. NCBI nr
Match: gi|778691835|ref|XP_011653361.1| (PREDICTED: uncharacterized protein LOC105435202 [Cucumis sativus])

HSP 1 Score: 89.7 bits (221), Expect = 4.9e-15
Identity = 53/89 (59.55%), Postives = 53/89 (59.55%), Query Frame = -3

Query: 166 EKMELLKALRLSQTXXXXXXXXXXXXXXXXDCISRAFEDEARMVFCYRQSLKLLELRVFK 225
           EKMELLKALRLSQT                DCISRAFEDEARMVFCYRQSLKLLELRVFK
Sbjct: 44  EKMELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARMVFCYRQSLKLLELRVFK 103

Query: 226 LQKQXXXXXXXXXXXSDKEW------WKW 285
           LQKQ           SDK        W W
Sbjct: 104 LQKQEEEEEEEEEEESDKNGGNGGMKWVW 132

Query: 286 345
           
Sbjct: 164 132

Query: 346 405
           
Sbjct: 224 132

Query: 406 415
           
Sbjct: 284 132

BLAST of CU098244 vs. NCBI nr
Match: gi|700198504|gb|KGN53662.1| (hypothetical protein Csa_4G097690 [Cucumis sativus])

HSP 1 Score: 89.4 bits (220), Expect = 6.3e-15
Identity = 48/64 (75.00%), Postives = 48/64 (75.00%), Query Frame = -3

Query: 223 EKMELLKALRLSQTXXXXXXXXXXXXXXXXDCISRAFEDEARMVFCYRQSLKLLELRVFK 282
           EKMELLKALRLSQT                DCISRAFEDEARMVFCYRQSLKLLELRVFK
Sbjct: 44  EKMELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARMVFCYRQSLKLLELRVFK 103

Query: 283 LQKQ 342
           LQKQ
Sbjct: 104 LQKQ 107

Query: 343 402
           
Sbjct: 164 107

Query: 403 415
           
Sbjct: 224 107

BLAST of CU098244 vs. NCBI nr
Match: gi|659111298|ref|XP_008455680.1| (PREDICTED: uncharacterized protein LOC103495794 [Cucumis melo])

HSP 1 Score: 82.4 bits (202), Expect = 7.7e-13
Identity = 44/64 (68.75%), Postives = 47/64 (73.44%), Query Frame = -3

Query: 223 EKMELLKALRLSQTXXXXXXXXXXXXXXXXDCISRAFEDEARMVFCYRQSLKLLELRVFK 282
           EK+ELLKALRLSQT                DCISRAFEDEAR++FCYRQSLKLLELRV K
Sbjct: 44  EKIELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARLMFCYRQSLKLLELRVCK 103

Query: 283 LQKQ 342
           LQKQ
Sbjct: 104 LQKQ 107

Query: 343 402
           
Sbjct: 164 107

Query: 403 415
           
Sbjct: 224 107

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0KZ57_CUCSA3.4e-1575.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G097690 PE=4 SV=1[more]
A0A0A0KZ57_CUCSA1.9e-02100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G097690 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|778691835|ref|XP_011653361.1|4.9e-1559.55PREDICTED: uncharacterized protein LOC105435202 [Cucumis sativus][more]
gi|700198504|gb|KGN53662.1|6.3e-1575.00hypothetical protein Csa_4G097690 [Cucumis sativus][more]
gi|659111298|ref|XP_008455680.1|7.7e-1368.75PREDICTED: uncharacterized protein LOC103495794 [Cucumis melo][more]
The following terms have been associated with this transcribed_cluster:
Vocabulary: INTERPRO
TermDefinition

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa4G097690Csa4G097690gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
FKNP3UI02L1V41FKNP3UI02L1V41EST
FKNP3UI02LHAV3FKNP3UI02LHAV3EST
FKNP3UI02LPICRFKNP3UI02LPICREST
FKNP3UI02LV3R3FKNP3UI02LV3R3EST
FKNP3UI02LWXZNFKNP3UI02LWXZNEST
FKNP3UI02MVQIKFKNP3UI02MVQIKEST
FKNP3UI02N4PWOFKNP3UI02N4PWOEST
FKNP3UI02ND413FKNP3UI02ND413EST
FKNP3UI02NQ655FKNP3UI02NQ655EST
FKNP3UI02OW0AWFKNP3UI02OW0AWEST
G0048323G0048323EST
G0116853G0116853EST
H0171113H0171113EST


Analysis Name: InterPro Annotations of cucumber unigene v3
Date Performed: 2016-11-16
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 73..101
scor