CU097028 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU097028
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionProtein IQ-DOMAIN 1
LocationChr1 : 25561961 .. 25564029 (-)
Sequence length790
The following sequences are available for this feature:

transcribed_cluster sequence

ACTGTAGAAATAATCCAGTGCACAGGTTCAAAAGACTCAAGCACAAACTGGCACCTGAGAGGCCATTTGAAGATGTCAAACCAAAAGTGGATACTGGTTTAAGATCACACAGCAATCCGAAAGAGAGATCCACACCGTTGGTAAAAAATGCAAAGAAGCGATTATCCTTGCCTAATAATGATCCCGGCAGTCAAAACCAAACGGCAAGAAATTCCACTGGCAAAGCGACAATGATGAAGTCAATCAATGATAAACCCAGGTCAATTTCCAGATCAAGTGACTCAAAATCTGCAAAACCTAAATCACATAATTGATGTGTAAACTATTCAAGATGATGAGGAAAATGCTTCGAGGACATGCTGCGGGATCGTGTGTAAATATGGCAACGCCATGTTGTGATCAGGTCGGTCACTAGCAAATTTGTATTCCCTTTGAATTTCTGAGTTTATTTTCATAGTGAGTTGTTGCAATGGTTGGCAAATGTATCCAGGGAATAAGGTTGGTGAGTTTCAAAGGGGGTGAGTCTGTAATTATTCATCTTTATTTATAAGTCTTCAACCATGTGGCTCTTTGGCACTTGTTCATCCTTTGTTTTTTTGTTGTTCAATGTCATATTTCAAAGAAGAATTTGGTATAGATTGGTTTTGTAATCATGAATCTCTTATGAAAGATGATCTTATCTACCCTTTTTAGGAAACGTCCCAACCATGAAGACCCCCATTGAAGTCTTATATTTTTCTCTCCTTTGATGAAAGAAAACCATTCTTTATTTCTTGATGAAGAAAACAAC
BLAST of CU097028 vs. TrEMBL
Match: A0A0A0K8R0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G212665 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 5.7e-28
Identity = 63/73 (86.30%), Postives = 69/73 (94.52%), Query Frame = 3

Query: 30  KRLKHKLAPERPFEDVKPKVDTGLRSHSNPKERSTPLVKNAKKRLSLPNNDPGSQNQTAR 89
           ++LKHKLAPERPFEDVKPKVDTGL+SHS+PKERSTP VK+AKKRL+L NNDPGSQNQT R
Sbjct: 205 QKLKHKLAPERPFEDVKPKVDTGLKSHSHPKERSTPFVKSAKKRLALSNNDPGSQNQTVR 264

Query: 90  NSTGKATMMKSIN 149
           NSTGKATM KSIN
Sbjct: 265 NSTGKATMTKSIN 277

Query: 150 209
           
Sbjct: 325 277

Query: 210 249
           
Sbjct: 385 277

BLAST of CU097028 vs. TrEMBL
Match: A0A059AB56_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J00581 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.6e-06
Identity = 32/59 (54.24%), Postives = 36/59 (61.02%), Query Frame = 3

Query: 39  KHKLAPERPFEDVKPKVDTGLRSHSNPKERSTPLVKNAKKRLSLPNNDPGSQNQTARNS 98
           K K   +   E+   +   G RSHSNPKERST   K AKKRLSLPNN   + NQ ARNS
Sbjct: 318 KPKHVTQNALEEANQRPGVGTRSHSNPKERSTQPDKQAKKRLSLPNNGASAGNQAARNS 376

Query: 99  158
           
Sbjct: 378 376

Query: 159 216
           
Sbjct: 438 376

BLAST of CU097028 vs. NCBI nr
Match: gi|778663961|ref|XP_004139079.2| (PREDICTED: LOW QUALITY PROTEIN: protein IQ-DOMAIN 1 [Cucumis sativus])

HSP 1 Score: 142.9 bits (359), Expect = 8.0e-31
Identity = 71/73 (97.26%), Postives = 73/73 (100.00%), Query Frame = 3

Query: 30  KRLKHKLAPERPFEDVKPKVDTGLRSHSNPKERSTPLVKNAKKRLSLPNNDPGSQNQTAR 89
           ++LKHKLAPERPFEDVKPKVDTGLRSHSNPKERSTPLVKNAKKRLSLPNNDPGSQNQTAR
Sbjct: 340 QKLKHKLAPERPFEDVKPKVDTGLRSHSNPKERSTPLVKNAKKRLSLPNNDPGSQNQTAR 399

Query: 90  NSTGKATMMKSIN 149
           NSTGKATMMKSIN
Sbjct: 400 NSTGKATMMKSIN 412

Query: 150 209
           
Sbjct: 460 412

Query: 210 249
           
Sbjct: 520 412

BLAST of CU097028 vs. NCBI nr
Match: gi|659085826|ref|XP_008443629.1| (PREDICTED: protein IQ-DOMAIN 1 [Cucumis melo])

HSP 1 Score: 137.5 bits (345), Expect = 3.3e-29
Identity = 68/73 (93.15%), Postives = 70/73 (95.89%), Query Frame = 3

Query: 30  KRLKHKLAPERPFEDVKPKVDTGLRSHSNPKERSTPLVKNAKKRLSLPNNDPGSQNQTAR 89
           ++LKHKLAPERPFEDVKPKVDTGLRSHSNPKERSTPLVKNAKKRLSLPNNDPG QNQTAR
Sbjct: 340 QKLKHKLAPERPFEDVKPKVDTGLRSHSNPKERSTPLVKNAKKRLSLPNNDPGGQNQTAR 399

Query: 90  NSTGKATMMKSIN 149
           NSTGK TM KSIN
Sbjct: 400 NSTGKVTMTKSIN 412

Query: 150 209
           
Sbjct: 460 412

Query: 210 249
           
Sbjct: 520 412

BLAST of CU097028 vs. NCBI nr
Match: gi|700188943|gb|KGN44176.1| (hypothetical protein Csa_7G212665 [Cucumis sativus])

HSP 1 Score: 128.3 bits (321), Expect = 2.0e-26
Identity = 63/73 (86.30%), Postives = 69/73 (94.52%), Query Frame = 3

Query: 30  KRLKHKLAPERPFEDVKPKVDTGLRSHSNPKERSTPLVKNAKKRLSLPNNDPGSQNQTAR 89
           ++LKHKLAPERPFEDVKPKVDTGL+SHS+PKERSTP VK+AKKRL+L NNDPGSQNQT R
Sbjct: 205 QKLKHKLAPERPFEDVKPKVDTGLKSHSHPKERSTPFVKSAKKRLALSNNDPGSQNQTVR 264

Query: 90  NSTGKATMMKSIN 149
           NSTGKATM KSIN
Sbjct: 265 NSTGKATMTKSIN 277

Query: 150 209
           
Sbjct: 325 277

Query: 210 249
           
Sbjct: 385 277

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0K8R0_CUCSA5.7e-2886.30Uncharacterized protein OS=Cucumis sativus GN=Csa_7G212665 PE=4 SV=1[more]
A0A059AB56_EUCGR1.6e-0654.24Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J00581 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|778663961|ref|XP_004139079.2|8.0e-3197.26PREDICTED: LOW QUALITY PROTEIN: protein IQ-DOMAIN 1 [Cucumis sativus][more]
gi|659085826|ref|XP_008443629.1|3.3e-2993.15PREDICTED: protein IQ-DOMAIN 1 [Cucumis melo][more]
gi|700188943|gb|KGN44176.1|2.0e-2686.30hypothetical protein Csa_7G212665 [Cucumis sativus][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa1G641010Csa1G641010gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
FKNP3UI02K2M28FKNP3UI02K2M28EST
FKNP3UI02KHEY5FKNP3UI02KHEY5EST
FKNP3UI02NGUYHFKNP3UI02NGUYHEST
FKNP3UI02NMYYNFKNP3UI02NMYYNEST
G0018604G0018604EST
G0046355G0046355EST
G0066192G0066192EST
G0115620G0115620EST
G0133012G0133012EST
G0188516G0188516EST
H0027651H0027651EST
H0033821H0033821EST
H0070563H0070563EST
H0113747H0113747EST
H0116613H0116613EST
H0146033H0146033EST
H0165659H0165659EST