CU095782 (transcribed_cluster) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CU095782
Type	transcribed_cluster
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Unknown protein
Location	Chr1 : 165114 .. 165667 (-)
Sequence length	249

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

AGATAATGAAGAGAAGAATGTAAAGAGACTCAATGACACAGCCAAAGGAGTTGATGGTAATGAGAAAGGTTGCGTTTGTTTTGAGAAGAGCATAGTAAATCCAAAGCATAGCACTGAATAACGCAACCACATAAGGTACAGACTGATAACCTTCCGCCGACTTCTTCTTGTATATCTTGTAAAATGTTGGCAATGGAGCTAGGAAGACCATAAAAGAGATAATGTTGCCTAAAAGGCCAAAGACAAAAG

Library


Library category	ESTs
fruit (8DPP) library	4

Homology

[Close]

BLAST of CU095782 vs. Swiss-Prot
Match: NOD3_MEDTR (Bidirectional sugar transporter N3 OS=Medicago truncatula GN=N3 PE=2 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 3.3e-31
Identity = 60/82 (73.17%), Postives = 74/82 (90.24%), Query Frame = -3


Query: 2   FVFGLLGNIISFMVFLAPLPTFYKIYKKKSAEGYQSVPYVVALFSAMLWIYYALLKTNAT 61
           F FG+LGN+ISF+VFLAP+ TFY+IYKKKS EG+QS+PY+VALFS+MLW+YYALLK +A 
Sbjct: 10  FTFGMLGNVISFLVFLAPISTFYRIYKKKSTEGFQSLPYLVALFSSMLWLYYALLKKDAF 69

Query: 62  FLITINSFGCVIESLYILLFII 121
            LITINSFGCV+E++YI+L+II
Sbjct: 70  LLITINSFGCVVETIYIILYII 91

Query: 122  181
           
Sbjct: 130  91

Query: 182  241
           
Sbjct: 190  91

Query: 242  248
           
Sbjct: 250  91

[Close]

BLAST of CU095782 vs. Swiss-Prot
Match: SWT14_ORYSI (Bidirectional sugar transporter SWEET14 OS=Oryza sativa subsp. indica GN=SWEET14 PE=2 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 1.6e-30
Identity = 61/82 (74.39%), Postives = 71/82 (86.59%), Query Frame = -3


Query: 2   FVFGLLGNIISFMVFLAPLPTFYKIYKKKSAEGYQSVPYVVALFSAMLWIYYALLKTNAT 61
           F FGLLGNIISFM +LAPLPTFY+IYK KS +G+QSVPYVVALFSAMLWIYYALLK++  
Sbjct: 12  FAFGLLGNIISFMTYLAPLPTFYRIYKSKSTQGFQSVPYVVALFSAMLWIYYALLKSDEC 71

Query: 62  FLITINSFGCVIESLYILLFII 121
            LITINS GCVIE++YI ++++
Sbjct: 72  LLITINSAGCVIETIYIAVYLV 93

Query: 122  181
           
Sbjct: 132  93

Query: 182  241
           
Sbjct: 192  93

Query: 242  248
           
Sbjct: 252  93

[Close]

BLAST of CU095782 vs. Swiss-Prot
Match: SWT14_ORYSJ (Bidirectional sugar transporter SWEET14 OS=Oryza sativa subsp. japonica GN=SWEET14 PE=2 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 1.6e-30
Identity = 61/82 (74.39%), Postives = 71/82 (86.59%), Query Frame = -3


Query: 2   FVFGLLGNIISFMVFLAPLPTFYKIYKKKSAEGYQSVPYVVALFSAMLWIYYALLKTNAT 61
           F FGLLGNIISFM +LAPLPTFY+IYK KS +G+QSVPYVVALFSAMLWIYYALLK++  
Sbjct: 12  FAFGLLGNIISFMTYLAPLPTFYRIYKSKSTQGFQSVPYVVALFSAMLWIYYALLKSDEC 71

Query: 62  FLITINSFGCVIESLYILLFII 121
            LITINS GCVIE++YI ++++
Sbjct: 72  LLITINSAGCVIETIYIAVYLV 93

Query: 122  181
           
Sbjct: 132  93

Query: 182  241
           
Sbjct: 192  93

Query: 242  248
           
Sbjct: 252  93

[Close]

BLAST of CU095782 vs. Swiss-Prot
Match: SWT15_VITVI (Bidirectional sugar transporter SWEET15 OS=Vitis vinifera GN=SWEET15 PE=3 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 6.1e-30
Identity = 59/79 (74.68%), Postives = 69/79 (87.34%), Query Frame = -3


Query: 8   VFGLLGNIISFMVFLAPLPTFYKIYKKKSAEGYQSVPYVVALFSAMLWIYYALLKTNATF 67
           +FG+LGNIISF+V+ AP PTFY+IYK+KSAEG+ S+PY+VALFSAMLW+YYALLK +A  
Sbjct: 14  IFGILGNIISFLVYFAPAPTFYRIYKRKSAEGFHSLPYIVALFSAMLWLYYALLKKDAFL 73

Query: 68  LITINSFGCVIESLYILLF 127
           LITINSFGC IES YILL+
Sbjct: 74  LITINSFGCAIESFYILLY 92

Query: 128  187
           
Sbjct: 134  92

Query: 188  245
           
Sbjct: 194  92

[Close]

BLAST of CU095782 vs. Swiss-Prot
Match: SWT15_ARATH (Bidirectional sugar transporter SWEET15 OS=Arabidopsis thaliana GN=SWEET15 PE=1 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 2.3e-29
Identity = 56/80 (70.00%), Postives = 70/80 (87.50%), Query Frame = -3


Query: 8   FVFGLLGNIISFMVFLAPLPTFYKIYKKKSAEGYQSVPYVVALFSAMLWIYYALLKTNAT 67
           F+FG+LGN+ISF+VFLAP+PTFY+IYK+KS E +QS+PY V+LFS MLW+YYAL+K +A 
Sbjct: 12  FIFGILGNVISFLVFLAPVPTFYRIYKRKSTESFQSLPYQVSLFSCMLWLYYALIKKDAF 71

Query: 68  FLITINSFGCVIESLYILLF 127
            LITINSFGCV+E+LYI +F
Sbjct: 72  LLITINSFGCVVETLYIAMF 91

Query: 128  187
           
Sbjct: 132  91

Query: 188  247
           
Sbjct: 192  91

[Close]

BLAST of CU095782 vs. TrEMBL
Match: A0A0A0LNT9_CUCSA (Bidirectional sugar transporter SWEET OS=Cucumis sativus GN=Csa_1G001300 PE=3 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 4.3e-38
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = -3


Query: 2   FVFGLLGNIISFMVFLAPLPTFYKIYKKKSAEGYQSVPYVVALFSAMLWIYYALLKTNAT 61
           FVFGLLGNIISFMVFLAPLPTFYKIYKKKSAEGYQSVPYVVALFSAMLWIYYALLKTNAT
Sbjct: 10  FVFGLLGNIISFMVFLAPLPTFYKIYKKKSAEGYQSVPYVVALFSAMLWIYYALLKTNAT 69

Query: 62  FLITINSFGCVIESLYILLFII 121
           FLITINSFGCVIESLYILLFII
Sbjct: 70  FLITINSFGCVIESLYILLFII 91

Query: 122  181
           
Sbjct: 130  91

Query: 182  241
           
Sbjct: 190  91

Query: 242  248
           
Sbjct: 250  91

[Close]

BLAST of CU095782 vs. TrEMBL
Match: A0A0S3RFF4_PHAAN (Bidirectional sugar transporter SWEET OS=Vigna angularis var. angularis GN=Vigan.02G224500 PE=3 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 8.6e-31
Identity = 66/83 (79.52%), Postives = 80/83 (96.39%), Query Frame = -3


Query: 2   FVFGLLGNIISFMVFLAPLPTFYKIYKKKSAEGYQSVPYVVALFSAMLWIYYALLKTNAT 61
           FVFGLLGN+ISFMVFLAPLPTFY+IYKKK+AEG+QS+PYVVALFS+MLWIYYAL+K +A+
Sbjct: 74  FVFGLLGNVISFMVFLAPLPTFYQIYKKKTAEGFQSLPYVVALFSSMLWIYYALVKKDAS 133

Query: 62  -FLITINSFGCVIESLYILLFII 121
             LITINSFGCVIES+Y+L+F++
Sbjct: 134 LLLITINSFGCVIESIYLLIFLV 156

Query: 122  181
           
Sbjct: 194  156

Query: 182  241
           
Sbjct: 254  156

Query: 242  248
           
Sbjct: 314  156

[Close]

BLAST of CU095782 vs. TrEMBL
Match: A0A0L9UCD6_PHAAN (Bidirectional sugar transporter SWEET OS=Phaseolus angularis GN=LR48_Vigan04g077300 PE=3 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 8.6e-31
Identity = 66/83 (79.52%), Postives = 80/83 (96.39%), Query Frame = -3


Query: 2   FVFGLLGNIISFMVFLAPLPTFYKIYKKKSAEGYQSVPYVVALFSAMLWIYYALLKTNAT 61
           FVFGLLGN+ISFMVFLAPLPTFY+IYKKK+AEG+QS+PYVVALFS+MLWIYYAL+K +A+
Sbjct: 10  FVFGLLGNVISFMVFLAPLPTFYQIYKKKTAEGFQSLPYVVALFSSMLWIYYALVKKDAS 69

Query: 62  -FLITINSFGCVIESLYILLFII 121
             LITINSFGCVIES+Y+L+F++
Sbjct: 70  LLLITINSFGCVIESIYLLIFLV 92

Query: 122  181
           
Sbjct: 130  92

Query: 182  241
           
Sbjct: 190  92

Query: 242  248
           
Sbjct: 250  92

[Close]

BLAST of CU095782 vs. TrEMBL
Match: V7AWB5_PHAVU (Bidirectional sugar transporter SWEET OS=Phaseolus vulgaris GN=PHAVU_009G162700g PE=3 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 4.3e-30
Identity = 65/83 (78.31%), Postives = 79/83 (95.18%), Query Frame = -3


Query: 2   FVFGLLGNIISFMVFLAPLPTFYKIYKKKSAEGYQSVPYVVALFSAMLWIYYALLKTNAT 61
           FVFGLLGN+ISFMVFLAPLPTFY+IYKKK+AEG+QS+PYVVALFS+MLWIYYAL+K +A+
Sbjct: 10  FVFGLLGNVISFMVFLAPLPTFYQIYKKKTAEGFQSLPYVVALFSSMLWIYYALVKKDAS 69

Query: 62  -FLITINSFGCVIESLYILLFII 121
             LITINSFGCVIES+Y+ +F++
Sbjct: 70  LLLITINSFGCVIESIYLAIFLL 92

Query: 122  181
           
Sbjct: 130  92

Query: 182  241
           
Sbjct: 190  92

Query: 242  248
           
Sbjct: 250  92

[Close]

BLAST of CU095782 vs. TrEMBL
Match: A0A164XFR9_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_016366 PE=4 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 5.6e-30
Identity = 62/79 (78.48%), Postives = 74/79 (93.67%), Query Frame = -3


Query: 5   FGLLGNIISFMVFLAPLPTFYKIYKKKSAEGYQSVPYVVALFSAMLWIYYALLKTNATFL 64
           FGLLGN++SFMVFLAP+PTFYK+YKKKS EG+QSVPYVV LFSAMLWIYYALLK+NA  L
Sbjct: 12  FGLLGNVVSFMVFLAPIPTFYKVYKKKSTEGFQSVPYVVGLFSAMLWIYYALLKSNAFLL 71

Query: 65  ITINSFGCVIESLYILLFI 124
           ITINS GCVI+++YI++F+
Sbjct: 72  ITINSVGCVIQTIYIVIFL 90

Query: 125  184
           
Sbjct: 132  90

Query: 185  242
           
Sbjct: 192  90

[Close]

BLAST of CU095782 vs. NCBI nr
Match: gi|449440520|ref|XP_004138032.1| (PREDICTED: bidirectional sugar transporter SWEET10 [Cucumis sativus])

HSP 1 Score: 155.6 bits (392), Expect = 3.7e-35
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = -3


Query: 2   FVFGLLGNIISFMVFLAPLPTFYKIYKKKSAEGYQSVPYVVALFSAMLWIYYALLKTNAT 61
           FVFGLLGNIISFMVFLAPLPTFYKIYKKKSAEGYQSVPYVVALFSAMLWIYYALLKTNAT
Sbjct: 10  FVFGLLGNIISFMVFLAPLPTFYKIYKKKSAEGYQSVPYVVALFSAMLWIYYALLKTNAT 69

Query: 62  FLITINSFGCVIESLYILLFII 121
           FLITINSFGCVIESLYILLFII
Sbjct: 70  FLITINSFGCVIESLYILLFII 91

Query: 122  181
           
Sbjct: 130  91

Query: 182  241
           
Sbjct: 190  91

Query: 242  248
           
Sbjct: 250  91

[Close]

BLAST of CU095782 vs. NCBI nr
Match: gi|659128834|ref|XP_008464393.1| (PREDICTED: bidirectional sugar transporter SWEET10-like [Cucumis melo])

HSP 1 Score: 155.6 bits (392), Expect = 3.7e-35
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = -3


Query: 2   FVFGLLGNIISFMVFLAPLPTFYKIYKKKSAEGYQSVPYVVALFSAMLWIYYALLKTNAT 61
           FVFGLLGNIISFMVFLAPLPTFYKIYKKKSAEGYQSVPYVVALFSAMLWIYYALLKTNAT
Sbjct: 10  FVFGLLGNIISFMVFLAPLPTFYKIYKKKSAEGYQSVPYVVALFSAMLWIYYALLKTNAT 69

Query: 62  FLITINSFGCVIESLYILLFII 121
           FLITINSFGCVIESLYILLFII
Sbjct: 70  FLITINSFGCVIESLYILLFII 91

Query: 122  181
           
Sbjct: 130  91

Query: 182  241
           
Sbjct: 190  91

Query: 242  248
           
Sbjct: 250  91

[Close]

BLAST of CU095782 vs. NCBI nr
Match: gi|965663660|dbj|BAT79369.1| (hypothetical protein VIGAN_02224500 [Vigna angularis var. angularis])

HSP 1 Score: 131.3 bits (329), Expect = 7.5e-28
Identity = 66/83 (79.52%), Postives = 80/83 (96.39%), Query Frame = -3


Query: 2   FVFGLLGNIISFMVFLAPLPTFYKIYKKKSAEGYQSVPYVVALFSAMLWIYYALLKTNAT 61
           FVFGLLGN+ISFMVFLAPLPTFY+IYKKK+AEG+QS+PYVVALFS+MLWIYYAL+K +A+
Sbjct: 74  FVFGLLGNVISFMVFLAPLPTFYQIYKKKTAEGFQSLPYVVALFSSMLWIYYALVKKDAS 133

Query: 62  -FLITINSFGCVIESLYILLFII 121
             LITINSFGCVIES+Y+L+F++
Sbjct: 134 LLLITINSFGCVIESIYLLIFLV 156

Query: 122  181
           
Sbjct: 194  156

Query: 182  241
           
Sbjct: 254  156

Query: 242  248
           
Sbjct: 314  156

[Close]

BLAST of CU095782 vs. NCBI nr
Match: gi|920697350|gb|KOM40575.1| (hypothetical protein LR48_Vigan04g077300 [Vigna angularis])

HSP 1 Score: 131.3 bits (329), Expect = 7.5e-28
Identity = 66/83 (79.52%), Postives = 80/83 (96.39%), Query Frame = -3


Query: 2   FVFGLLGNIISFMVFLAPLPTFYKIYKKKSAEGYQSVPYVVALFSAMLWIYYALLKTNAT 61
           FVFGLLGN+ISFMVFLAPLPTFY+IYKKK+AEG+QS+PYVVALFS+MLWIYYAL+K +A+
Sbjct: 10  FVFGLLGNVISFMVFLAPLPTFYQIYKKKTAEGFQSLPYVVALFSSMLWIYYALVKKDAS 69

Query: 62  -FLITINSFGCVIESLYILLFII 121
             LITINSFGCVIES+Y+L+F++
Sbjct: 70  LLLITINSFGCVIESIYLLIFLV 92

Query: 122  181
           
Sbjct: 130  92

Query: 182  241
           
Sbjct: 190  92

Query: 242  248
           
Sbjct: 250  92

[Close]

BLAST of CU095782 vs. NCBI nr
Match: gi|950971192|ref|XP_014500254.1| (PREDICTED: bidirectional sugar transporter SWEET10-like [Vigna radiata var. radiata])

HSP 1 Score: 131.3 bits (329), Expect = 7.5e-28
Identity = 66/83 (79.52%), Postives = 80/83 (96.39%), Query Frame = -3


Query: 2   FVFGLLGNIISFMVFLAPLPTFYKIYKKKSAEGYQSVPYVVALFSAMLWIYYALLKTNAT 61
           FVFGLLGN+ISFMVFLAPLPTFY+IYKKK+AEG+QS+PYVVALFS+MLWIYYAL+K +A+
Sbjct: 10  FVFGLLGNVISFMVFLAPLPTFYQIYKKKTAEGFQSLPYVVALFSSMLWIYYALVKKDAS 69

Query: 62  -FLITINSFGCVIESLYILLFII 121
             LITINSFGCVIES+Y+L+F++
Sbjct: 70  LLLITINSFGCVIESIYLLIFLV 92

Query: 122  181
           
Sbjct: 130  92

Query: 182  241
           
Sbjct: 190  92

Query: 242  248
           
Sbjct: 250  92

The following BLAST results are available for this feature:

BLAST of CU095782 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NOD3_MEDTR	3.3e-31	73.17	Bidirectional sugar transporter N3 OS=Medicago truncatula GN=N3 PE=2 SV=1	[more]
SWT14_ORYSI	1.6e-30	74.39	Bidirectional sugar transporter SWEET14 OS=Oryza sativa subsp. indica GN=SWEET14...	[more]
SWT14_ORYSJ	1.6e-30	74.39	Bidirectional sugar transporter SWEET14 OS=Oryza sativa subsp. japonica GN=SWEET...	[more]
SWT15_VITVI	6.1e-30	74.68	Bidirectional sugar transporter SWEET15 OS=Vitis vinifera GN=SWEET15 PE=3 SV=1	[more]
SWT15_ARATH	2.3e-29	70.00	Bidirectional sugar transporter SWEET15 OS=Arabidopsis thaliana GN=SWEET15 PE=1 ...	[more]

BLAST of CU095782 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LNT9_CUCSA	4.3e-38	100.00	Bidirectional sugar transporter SWEET OS=Cucumis sativus GN=Csa_1G001300 PE=3 SV...	[more]
A0A0S3RFF4_PHAAN	8.6e-31	79.52	Bidirectional sugar transporter SWEET OS=Vigna angularis var. angularis GN=Vigan...	[more]
A0A0L9UCD6_PHAAN	8.6e-31	79.52	Bidirectional sugar transporter SWEET OS=Phaseolus angularis GN=LR48_Vigan04g077...	[more]
V7AWB5_PHAVU	4.3e-30	78.31	Bidirectional sugar transporter SWEET OS=Phaseolus vulgaris GN=PHAVU_009G162700g...	[more]
A0A164XFR9_DAUCA	5.6e-30	78.48	Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_016366 PE=4 SV=1	[more]

BLAST of CU095782 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449440520\|ref\|XP_004138032.1\|	3.7e-35	100.00	PREDICTED: bidirectional sugar transporter SWEET10 [Cucumis sativus]	[more]
gi\|659128834\|ref\|XP_008464393.1\|	3.7e-35	100.00	PREDICTED: bidirectional sugar transporter SWEET10-like [Cucumis melo]	[more]
gi\|965663660\|dbj\|BAT79369.1\|	7.5e-28	79.52	hypothetical protein VIGAN_02224500 [Vigna angularis var. angularis]	[more]
gi\|920697350\|gb\|KOM40575.1\|	7.5e-28	79.52	hypothetical protein LR48_Vigan04g077300 [Vigna angularis]	[more]
gi\|950971192\|ref\|XP_014500254.1\|	7.5e-28	79.52	PREDICTED: bidirectional sugar transporter SWEET10-like [Vigna radiata var. radi...	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition
IPR004316	SWEET_sugar_transpr

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

GO Annotation

GO Assignments

This transcribed_cluster is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
Csa1G001300	Csa1G001300	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
FKNP3UI02M1W0H	FKNP3UI02M1W0H	EST
FKNP3UI02MO418	FKNP3UI02MO418	EST
FKNP3UI02N13VU	FKNP3UI02N13VU	EST
FKNP3UI02NQCZV	FKNP3UI02NQCZV	EST

InterPro

Analysis Name: InterPro Annotations of cucumber unigene v3
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004316	SWEET sugar transporter	PFAM	PF03083	MtN3_slv	coord: 3..83 score: 2.6
None	No IPR available	PANTHER	PTHR10791	RAG1-ACTIVATING PROTEIN 1	coord: 2..83 score: 1.3