CU094867 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU094867
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionDolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B
LocationChr1 : 4736678 .. 4738147 (-)
Sequence length437
The following sequences are available for this feature:

transcribed_cluster sequence

GGAGGAGTACCGAGTCGACAAAGGAGCAGCTCCCAAGATGTTGAATTGTCTAATGTACAAACTTTCGTATTAATCGGTTTGGGGAGTTAGTAACAGAATATGGCAAGCCTCCTGGGTTCGATCGTGCCAGAGGAGTTGAAATTGGCAACAAGGATATCAAACTTGAGCACTTGGAGGAGGCATTCACCACATCTAATTGGATAGTTCGTATTTATAGAGTCAAACCACCAAATAACAGGTGGTGATTGATCTTTTTTCCCGAACCATCTTTGGAACGGCTACGAGTCAGATAGAACTCTGAGCAAGAGAGTCTTTGACATAGTGTTTATTCTAGGCAAAGAAAGTAAACTGGAATTTTGTTTCTACAACTTGAGCTGTAGTATCGAATGCGTCAATATTTTGAAATCTTTTTCAGAGATTCACAATGGATTCCTTTC
BLAST of CU094867 vs. Swiss-Prot
Match: STT3B_ARATH (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B OS=Arabidopsis thaliana GN=STT3B PE=2 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 4.0e-24
Identity = 51/55 (92.73%), Postives = 51/55 (92.73%), Query Frame = 3

Query: 75  RFGELVTEYGKPPGFDRARGVEIGNKDIKLEHLEEAFTTSNWIVRIYRVKPPNNR 134
           RFGEL TEYGKPPG+DRARGVEIGNKDIKLEHLEEA+TTSNWIVRIYRVKPP NR
Sbjct: 680 RFGELTTEYGKPPGYDRARGVEIGNKDIKLEHLEEAYTTSNWIVRIYRVKPPTNR 734

Query: 135 194
           
Sbjct: 740 734

Query: 195 240
           
Sbjct: 800 734

BLAST of CU094867 vs. Swiss-Prot
Match: STT3B_ORYSJ (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B OS=Oryza sativa subsp. japonica GN=STT3B PE=2 SV=2)

HSP 1 Score: 108.6 bits (270), Expect = 5.8e-23
Identity = 49/55 (89.09%), Postives = 50/55 (90.91%), Query Frame = 3

Query: 75  RFGELVTEYGKPPGFDRARGVEIGNKDIKLEHLEEAFTTSNWIVRIYRVKPPNNR 134
           RFGEL TEYGKPPG+DR RGVEIGNKDIKLE+LEEAFTTSNWIVRIY+VKPP NR
Sbjct: 666 RFGELTTEYGKPPGYDRVRGVEIGNKDIKLEYLEEAFTTSNWIVRIYKVKPPKNR 720

Query: 135 194
           
Sbjct: 726 720

Query: 195 240
           
Sbjct: 786 720

BLAST of CU094867 vs. Swiss-Prot
Match: STT3B_HUMAN (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B OS=Homo sapiens GN=STT3B PE=1 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 8.9e-16
Identity = 36/55 (65.45%), Postives = 43/55 (78.18%), Query Frame = 3

Query: 75  RFGELVTEYGKPPGFDRARGVEIGNKDIKLEHLEEAFTTSNWIVRIYRVKPPNNR 134
           RFGE+  ++  PPGFDR R  EIGNKDIK +HLEEAFT+ +W+VRIY+VK P+NR
Sbjct: 724 RFGEMQLDFRTPPGFDRTRNAEIGNKDIKFKHLEEAFTSEHWLVRIYKVKAPDNR 778

Query: 135 194
           
Sbjct: 784 778

Query: 195 240
           
Sbjct: 844 778

BLAST of CU094867 vs. Swiss-Prot
Match: STT3B_MOUSE (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B OS=Mus musculus GN=Stt3b PE=1 SV=2)

HSP 1 Score: 84.7 bits (208), Expect = 8.9e-16
Identity = 36/55 (65.45%), Postives = 43/55 (78.18%), Query Frame = 3

Query: 75  RFGELVTEYGKPPGFDRARGVEIGNKDIKLEHLEEAFTTSNWIVRIYRVKPPNNR 134
           RFGE+  ++  PPGFDR R  EIGNKDIK +HLEEAFT+ +W+VRIY+VK P+NR
Sbjct: 721 RFGEMQLDFRTPPGFDRTRNAEIGNKDIKFKHLEEAFTSEHWLVRIYKVKAPDNR 775

Query: 135 194
           
Sbjct: 781 775

Query: 195 240
           
Sbjct: 841 775

BLAST of CU094867 vs. Swiss-Prot
Match: STT3A_HUMAN (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A OS=Homo sapiens GN=STT3A PE=1 SV=2)

HSP 1 Score: 77.4 bits (189), Expect = 1.4e-13
Identity = 34/55 (61.82%), Postives = 42/55 (76.36%), Query Frame = 3

Query: 75  RFGELVTEYGKPPGFDRARGVEIGNKDIKLEHLEEAFTTSNWIVRIYRVKPPNNR 134
           RFG++ TE  +PPGFDR R  EIGNKD +L+ LEEA+TT +W+VRIY+VK  +NR
Sbjct: 646 RFGQVYTEAKRPPGFDRVRNAEIGNKDFELDVLEEAYTTEHWLVRIYKVKDLDNR 700

Query: 135 194
           
Sbjct: 706 700

Query: 195 240
           
Sbjct: 766 700

BLAST of CU094867 vs. TrEMBL
Match: A0A0A0LT73_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G043120 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 2.5e-25
Identity = 57/65 (87.69%), Postives = 61/65 (93.85%), Query Frame = 3

Query: 54  CTNFRIN--RFGELVTEYGKPPGFDRARGVEIGNKDIKLEHLEEAFTTSNWIVRIYRVKP 113
           C  ++++  RFGELVTEYGKPPGFDRARGVEIGNKDIKLEHLEEAFTTSNWIVRIYRVKP
Sbjct: 683 CLMYKLSYYRFGELVTEYGKPPGFDRARGVEIGNKDIKLEHLEEAFTTSNWIVRIYRVKP 742

Query: 114 PNNRW 173
           PNNRW
Sbjct: 743 PNNRW 747

Query: 174 233
           
Sbjct: 803 747

Query: 234 243
           
Sbjct: 863 747

BLAST of CU094867 vs. TrEMBL
Match: B9I4Z5_POPTR (STAUROSPORIN AND TEMPERATURE SENSITIVE 3-LIKE B family protein OS=Populus trichocarpa GN=POPTR_0012s00900g PE=4 SV=2)

HSP 1 Score: 120.9 bits (302), Expect = 1.2e-24
Identity = 55/65 (84.62%), Postives = 61/65 (93.85%), Query Frame = 3

Query: 54  CTNFRIN--RFGELVTEYGKPPGFDRARGVEIGNKDIKLEHLEEAFTTSNWIVRIYRVKP 113
           C  ++++  RFGELVTEYGKPPG+DRARGVEIGNKDIKLEHLEEAFTTSNWIVRIY+VKP
Sbjct: 679 CLMYKLSYYRFGELVTEYGKPPGYDRARGVEIGNKDIKLEHLEEAFTTSNWIVRIYKVKP 738

Query: 114 PNNRW 173
           PNNRW
Sbjct: 739 PNNRW 743

Query: 174 233
           
Sbjct: 799 743

Query: 234 243
           
Sbjct: 859 743

BLAST of CU094867 vs. TrEMBL
Match: U5FLS2_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0015s05610g PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.2e-24
Identity = 55/65 (84.62%), Postives = 61/65 (93.85%), Query Frame = 3

Query: 54  CTNFRIN--RFGELVTEYGKPPGFDRARGVEIGNKDIKLEHLEEAFTTSNWIVRIYRVKP 113
           C  ++++  RFGELVTEYGKPPG+DRARGVEIGNKDIKLEHLEEAFTTSNWIVRIY+VKP
Sbjct: 588 CLMYKLSYYRFGELVTEYGKPPGYDRARGVEIGNKDIKLEHLEEAFTTSNWIVRIYKVKP 647

Query: 114 PNNRW 173
           PNNRW
Sbjct: 648 PNNRW 652

Query: 174 233
           
Sbjct: 708 652

Query: 234 243
           
Sbjct: 768 652

BLAST of CU094867 vs. TrEMBL
Match: V4TSH7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10019005mg PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.2e-24
Identity = 55/65 (84.62%), Postives = 61/65 (93.85%), Query Frame = 3

Query: 54  CTNFRIN--RFGELVTEYGKPPGFDRARGVEIGNKDIKLEHLEEAFTTSNWIVRIYRVKP 113
           C  ++++  RFGELVTEYGKPPG+DRARGVEIGNKDIKLEHLEEAFTTSNWIVRIY+VKP
Sbjct: 676 CLMYKLSYYRFGELVTEYGKPPGYDRARGVEIGNKDIKLEHLEEAFTTSNWIVRIYKVKP 735

Query: 114 PNNRW 173
           PNNRW
Sbjct: 736 PNNRW 740

Query: 174 233
           
Sbjct: 796 740

Query: 234 243
           
Sbjct: 856 740

BLAST of CU094867 vs. TrEMBL
Match: A0A067DTL9_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0046351mg PE=4 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 1.6e-24
Identity = 54/56 (96.43%), Postives = 56/56 (100.00%), Query Frame = 3

Query: 75  RFGELVTEYGKPPGFDRARGVEIGNKDIKLEHLEEAFTTSNWIVRIYRVKPPNNRW 134
           RFGELVTEYGKPPG+DRARGVEIGNKDIKLEHLEEAFTTSNWIVRIY+VKPPNNRW
Sbjct: 7   RFGELVTEYGKPPGYDRARGVEIGNKDIKLEHLEEAFTTSNWIVRIYKVKPPNNRW 62

Query: 135 194
           
Sbjct: 67  62

Query: 195 243
           
Sbjct: 127 62

BLAST of CU094867 vs. NCBI nr
Match: gi|449439509|ref|XP_004137528.1| (PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B [Cucumis sativus])

HSP 1 Score: 128.6 bits (322), Expect = 8.6e-27
Identity = 57/65 (87.69%), Postives = 61/65 (93.85%), Query Frame = 3

Query: 54  CTNFRIN--RFGELVTEYGKPPGFDRARGVEIGNKDIKLEHLEEAFTTSNWIVRIYRVKP 113
           C  ++++  RFGELVTEYGKPPGFDRARGVEIGNKDIKLEHLEEAFTTSNWIVRIYRVKP
Sbjct: 683 CLMYKLSYYRFGELVTEYGKPPGFDRARGVEIGNKDIKLEHLEEAFTTSNWIVRIYRVKP 742

Query: 114 PNNRW 173
           PNNRW
Sbjct: 743 PNNRW 747

Query: 174 233
           
Sbjct: 803 747

Query: 234 243
           
Sbjct: 863 747

BLAST of CU094867 vs. NCBI nr
Match: gi|659066959|ref|XP_008467302.1| (PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B [Cucumis melo])

HSP 1 Score: 127.5 bits (319), Expect = 1.9e-26
Identity = 56/65 (86.15%), Postives = 61/65 (93.85%), Query Frame = 3

Query: 54  CTNFRIN--RFGELVTEYGKPPGFDRARGVEIGNKDIKLEHLEEAFTTSNWIVRIYRVKP 113
           C  ++++  RFGELVTEYGKPPG+DRARGVEIGNKDIKLEHLEEAFTTSNWIVRIYRVKP
Sbjct: 683 CLMYKLSYYRFGELVTEYGKPPGYDRARGVEIGNKDIKLEHLEEAFTTSNWIVRIYRVKP 742

Query: 114 PNNRW 173
           PNNRW
Sbjct: 743 PNNRW 747

Query: 174 233
           
Sbjct: 803 747

Query: 234 243
           
Sbjct: 863 747

BLAST of CU094867 vs. NCBI nr
Match: gi|743908599|ref|XP_011047756.1| (PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B-like [Populus euphratica])

HSP 1 Score: 126.3 bits (316), Expect = 4.3e-26
Identity = 55/65 (84.62%), Postives = 61/65 (93.85%), Query Frame = 3

Query: 54  CTNFRIN--RFGELVTEYGKPPGFDRARGVEIGNKDIKLEHLEEAFTTSNWIVRIYRVKP 113
           C  ++++  RFGELVTEYGKPPG+DRARGVEIGNKDIKLEHLEEAFTTSNWIVRIY+VKP
Sbjct: 674 CLMYKLSYYRFGELVTEYGKPPGYDRARGVEIGNKDIKLEHLEEAFTTSNWIVRIYKVKP 733

Query: 114 PNNRW 173
           PNNRW
Sbjct: 734 PNNRW 738

Query: 174 233
           
Sbjct: 794 738

Query: 234 243
           
Sbjct: 854 738

BLAST of CU094867 vs. NCBI nr
Match: gi|566196142|ref|XP_002318345.2| (STAUROSPORIN AND TEMPERATURE SENSITIVE 3-LIKE B family protein [Populus trichocarpa])

HSP 1 Score: 126.3 bits (316), Expect = 4.3e-26
Identity = 55/65 (84.62%), Postives = 61/65 (93.85%), Query Frame = 3

Query: 54  CTNFRIN--RFGELVTEYGKPPGFDRARGVEIGNKDIKLEHLEEAFTTSNWIVRIYRVKP 113
           C  ++++  RFGELVTEYGKPPG+DRARGVEIGNKDIKLEHLEEAFTTSNWIVRIY+VKP
Sbjct: 679 CLMYKLSYYRFGELVTEYGKPPGYDRARGVEIGNKDIKLEHLEEAFTTSNWIVRIYKVKP 738

Query: 114 PNNRW 173
           PNNRW
Sbjct: 739 PNNRW 743

Query: 174 233
           
Sbjct: 799 743

Query: 234 243
           
Sbjct: 859 743

BLAST of CU094867 vs. NCBI nr
Match: gi|743919320|ref|XP_011003683.1| (PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B [Populus euphratica])

HSP 1 Score: 126.3 bits (316), Expect = 4.3e-26
Identity = 55/65 (84.62%), Postives = 61/65 (93.85%), Query Frame = 3

Query: 54  CTNFRIN--RFGELVTEYGKPPGFDRARGVEIGNKDIKLEHLEEAFTTSNWIVRIYRVKP 113
           C  ++++  RFGELVTEYGKPPG+DRARGVEIGNKDIKLEHLEEAFTTSNWIVRIY+VKP
Sbjct: 679 CLMYKLSYYRFGELVTEYGKPPGYDRARGVEIGNKDIKLEHLEEAFTTSNWIVRIYKVKP 738

Query: 114 PNNRW 173
           PNNRW
Sbjct: 739 PNNRW 743

Query: 174 233
           
Sbjct: 799 743

Query: 234 243
           
Sbjct: 859 743

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
STT3B_ARATH4.0e-2492.73Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B OS=... [more]
STT3B_ORYSJ5.8e-2389.09Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B OS=... [more]
STT3B_HUMAN8.9e-1665.45Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B OS=... [more]
STT3B_MOUSE8.9e-1665.45Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B OS=... [more]
STT3A_HUMAN1.4e-1361.82Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A OS=... [more]
Match NameE-valueIdentityDescription
A0A0A0LT73_CUCSA2.5e-2587.69Uncharacterized protein OS=Cucumis sativus GN=Csa_1G043120 PE=4 SV=1[more]
B9I4Z5_POPTR1.2e-2484.62STAUROSPORIN AND TEMPERATURE SENSITIVE 3-LIKE B family protein OS=Populus tricho... [more]
U5FLS2_POPTR1.2e-2484.62Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0015s05610g PE=4 SV=1[more]
V4TSH7_9ROSI1.2e-2484.62Uncharacterized protein OS=Citrus clementina GN=CICLE_v10019005mg PE=4 SV=1[more]
A0A067DTL9_CITSI1.6e-2496.43Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0046351mg PE=4 ... [more]
Match NameE-valueIdentityDescription
gi|449439509|ref|XP_004137528.1|8.6e-2787.69PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subuni... [more]
gi|659066959|ref|XP_008467302.1|1.9e-2686.15PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subuni... [more]
gi|743908599|ref|XP_011047756.1|4.3e-2684.62PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subuni... [more]
gi|566196142|ref|XP_002318345.2|4.3e-2684.62STAUROSPORIN AND TEMPERATURE SENSITIVE 3-LIKE B family protein [Populus trichoca... [more]
gi|743919320|ref|XP_011003683.1|4.3e-2684.62PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subuni... [more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa1G043120Csa1G043120gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
FKNP3UI02KVQ7DFKNP3UI02KVQ7DEST
FKNP3UI02OGRAQFKNP3UI02OGRAQEST
G0164268G0164268EST
H0015106H0015106EST
H0024275H0024275EST
H0076797H0076797EST