CU094841 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU094841
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr2 : 7827103 .. 7827808 (-)
Sequence length338
The following sequences are available for this feature:

transcribed_cluster sequence

ACCAACACCTTCTCCACCAACCCCAGCACCTGTTGCGGCCCCAGAGCCATCCCCTGCACCCGCGCCGGGAAAGCATAAGCATAGGAGGCGTCACAAAACATAAGAAGCATCAAGCACCAGCCCCGGCCCCTACCGTCCCAAGCCCACCGGCACCACCTACAGTGGTGGATTCACAAGATAGTACAGCCCCGGCACCATCACCAGATCTGAATGGAGGAGACCCAGTGAAAAGAAAGGTGGGAAGATGGAGTAAAGTTGGTTTGGGATTCATATTTCTAGTTGCTACCACTGGCTTCAATTTTATAATTTTTTTAAGAGAGAATTATTACCAAGGAATC
BLAST of CU094841 vs. TrEMBL
Match: A0A0A0LHJ4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G115750 PE=4 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 6.1e-19
Identity = 50/68 (73.53%), Postives = 50/68 (73.53%), Query Frame = 3

Query: 96  KHKKHQXXXXXXXXXXXXXXXXXXDSQDSTAPAPSPDLNGGDPVKRKVGRWSKVGLGFIF 155
           KHKKHQ                  DSQDSTAPAPSPDLNGGDPVKRKVGRWSKVGLGFIF
Sbjct: 174 KHKKHQAPAPAPTVPSPPAPPTVVDSQDSTAPAPSPDLNGGDPVKRKVGRWSKVGLGFIF 233

Query: 156 LVATTGFN 215
           LVATTGFN
Sbjct: 234 LVATTGFN 241

Query: 216 275
           
Sbjct: 294 241

Query: 276 300
           
Sbjct: 354 241

BLAST of CU094841 vs. NCBI nr
Match: gi|778668213|ref|XP_011649058.1| (PREDICTED: lysine-rich arabinogalactan protein 19-like [Cucumis sativus])

HSP 1 Score: 101.7 bits (252), Expect = 8.7e-19
Identity = 50/68 (73.53%), Postives = 50/68 (73.53%), Query Frame = 3

Query: 96  KHKKHQXXXXXXXXXXXXXXXXXXDSQDSTAPAPSPDLNGGDPVKRKVGRWSKVGLGFIF 155
           KHKKHQ                  DSQDSTAPAPSPDLNGGDPVKRKVGRWSKVGLGFIF
Sbjct: 160 KHKKHQAPAPAPTVPSPPAPPTVVDSQDSTAPAPSPDLNGGDPVKRKVGRWSKVGLGFIF 219

Query: 156 LVATTGFN 215
           LVATTGFN
Sbjct: 220 LVATTGFN 227

Query: 216 275
           
Sbjct: 280 227

Query: 276 300
           
Sbjct: 340 227

BLAST of CU094841 vs. NCBI nr
Match: gi|700206281|gb|KGN61400.1| (hypothetical protein Csa_2G115750 [Cucumis sativus])

HSP 1 Score: 101.7 bits (252), Expect = 8.7e-19
Identity = 50/68 (73.53%), Postives = 50/68 (73.53%), Query Frame = 3

Query: 96  KHKKHQXXXXXXXXXXXXXXXXXXDSQDSTAPAPSPDLNGGDPVKRKVGRWSKVGLGFIF 155
           KHKKHQ                  DSQDSTAPAPSPDLNGGDPVKRKVGRWSKVGLGFIF
Sbjct: 174 KHKKHQAPAPAPTVPSPPAPPTVVDSQDSTAPAPSPDLNGGDPVKRKVGRWSKVGLGFIF 233

Query: 156 LVATTGFN 215
           LVATTGFN
Sbjct: 234 LVATTGFN 241

Query: 216 275
           
Sbjct: 294 241

Query: 276 300
           
Sbjct: 354 241

BLAST of CU094841 vs. NCBI nr
Match: gi|659114696|ref|XP_008457186.1| (PREDICTED: lysine-rich arabinogalactan protein 19 [Cucumis melo])

HSP 1 Score: 89.4 bits (220), Expect = 4.5e-15
Identity = 44/68 (64.71%), Postives = 47/68 (69.12%), Query Frame = 3

Query: 96  KHKKHQXXXXXXXXXXXXXXXXXXDSQDSTAPAPSPDLNGGDPVKRKVGRWSKVGLGFIF 155
           KHKKHQ                  DSQDSTAPAPSPDL+ GDP+K KVG W+KVGLGFIF
Sbjct: 174 KHKKHQAPAPAPTVPSPPAPPTVVDSQDSTAPAPSPDLSRGDPMKGKVGTWTKVGLGFIF 233

Query: 156 LVATTGFN 215
           LVATTGFN
Sbjct: 234 LVATTGFN 241

Query: 216 275
           
Sbjct: 294 241

Query: 276 300
           
Sbjct: 354 241

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LHJ4_CUCSA6.1e-1973.53Uncharacterized protein OS=Cucumis sativus GN=Csa_2G115750 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|778668213|ref|XP_011649058.1|8.7e-1973.53PREDICTED: lysine-rich arabinogalactan protein 19-like [Cucumis sativus][more]
gi|700206281|gb|KGN61400.1|8.7e-1973.53hypothetical protein Csa_2G115750 [Cucumis sativus][more]
gi|659114696|ref|XP_008457186.1|4.5e-1564.71PREDICTED: lysine-rich arabinogalactan protein 19 [Cucumis melo][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa2G115750Csa2G115750gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
G0153676G0153676EST
H0036078H0036078EST
H0037266H0037266EST
H0093591H0093591EST
H0187388H0187388EST