CU094562 (transcribed_cluster) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CU094562
Type	transcribed_cluster
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Unknown protein
Location	Chr4 : 6379864 .. 6381277 (+)
Sequence length	1418

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

GCTTAAACAAGAAAGTGGCCTACTTAAGTTTTGATTGAATTTCAAGAATTCAAGCGAGTTAACATAGAATGTGTTGTCTGTTAGCCAGAAGAAGCACCAACATTTATATTAGCCTAGTAACAACTTAGCACTAACGTAAAACTAAACTTATAGGAAGACATCAGGCTTATATAACGTGATTGAAAAACAAAAGGTAAGGATATGACAGTAGATGCACAGTAGGTAGAGGCACAGTGGAAAATGTTCTCAGTCCTCAAACTTTCAAAAGCTGCATTTTTGTTGGAAAATGCTAAAGCAATCCAATCAGGTTGGGCGGCAGACCACTGCAACTGGTTAATTTCAAATGCAGCAGAATAACATGGACATTGGATCAATGCCATTGGGGCCTGCAACCATAGGCAGCTCCCAGATGAGGGCCTGCTTGTCATCCCCTGCGGAACAAATATGCCTGCAGCTCCGAGGCGCCCAGGCTATAGCATTGACACTGGAATGATGCCTCTCCAATTCAGCAACCGGCACACTTTGGTGAGCGAATGTCCAAAATAACAATTTTGTTGCTGTCCATCAGAATTGTGGCCATATACCGCAGGTCCTGTTTGTTCCATGCCAGTCTGAGCAAAGGGGTATCAGGTTGGGGGCTTTCGTATATAATGGTAGAGTGCTCCTTATCTCTCATGTCGAAAATCCTTACCGACCCATCAGCGGAAACAGAAGCAAAAACCCGGGCTTCCCCCCAAGCAATGTCATAAACCTCTTTGTCGTGAGCTATGAACTGGGTTTCCACCACACTCTTCTCAATGTCCCAAATAGTACAAGTGGTGTCAATACTGGAGGTTCCAATTCTCTTGGGCTCAACTTCATTCCAGTCGAAGGAAGTTAACGGGGCACAGAATTCACTGGTTTTGCTGTTGTTGAGGAGGGAGAGGGGTTCGATGGAAGAATCTCCGAGTTTCCAGAGGCGGAGAGAGTCGCCGGAGGAGGCCAAGAGAGAGGAGAGGGGACTGGGATTGAACATGAGCTTGGTGGGTGGGTAGGGGTGCTCAAAGGAGAGGGAAGGATTGGCTTTAATGGAGATAGAATCTGGATCAAAAGACACAATGTCGACGCGGTTGTTGTACTCTTCGACGAAGCTGCCAAGCGCTATGCGACTGGAGAAATTAAGAGAGTGTGCGTGAGGGGAAGAAATGGCCATGGCGTAGAGAGGATGCGGAGATTCGTAGGTCGCCAAGAATTCGGATCTGGAGGCTGCGTGTTCCATGATTCCAAAAGCGAAGAACGATGGAATAGACTGAGAGAGACAATGAAGGACGAACTGATGATCGGTACACGGAACGCCGACGAGATGGCGACTGTCGAACGATGGCTTTTGCTCAGAAAAATAAAAACGAAATGGAAAAATTGTGGAACGCGTTGAGGAT

Library


Library category	ESTs
published gene (cucumber)	1
fruit (8DPP) library	1
gynoecious flower library	5
hermaphrodite flower library	2

Homology

[Close]

BLAST of CU094562 vs. Swiss-Prot
Match: TTG1_ARATH (Protein TRANSPARENT TESTA GLABRA 1 OS=Arabidopsis thaliana GN=TTG1 PE=1 SV=1)

HSP 1 Score: 367.9 bits (943), Expect = 1.7e-100
Identity = 204/346 (58.96%), Postives = 240/346 (69.36%), Query Frame = -2


Query: 257  SRSEFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPDSISIK 316
            SRSE   TY+SP+PLYAMA SS  + S     RIA+GSF+E+YNNR+DI+SFD DS+++K
Sbjct: 10   SRSETAVTYDSPYPLYAMAFSSLRSSS---GHRIAVGSFLEDYNNRIDILSFDSDSMTVK 69

Query: 317  ANPSLSFEHPYPPTKLMFNPXXXXXXXXXXXXXXXX-----WKLGD--SSIEPLSLLNNS 376
              P+LSFEHPYPPTKLMF+P                     W++ +  S++EP+S+LNNS
Sbjct: 70   PLPNLSFEHPYPPTKLMFSPPSLRRPSSGDLLASSGDFLRLWEINEDSSTVEPISVLNNS 129

Query: 377  KTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEA 436
            KTSEFCAPLTSFDWN+VEPKR+GT SIDTTCTIWDIEKSVVETQ IAHDKEV+DIAWGEA
Sbjct: 130  KTSEFCAPLTSFDWNDVEPKRLGTCSIDTTCTIWDIEKSVVETQLIAHDKEVHDIAWGEA 189

Query: 437  RVFASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIV 496
            RVFASVSADGSVRIFD+RDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNK+V
Sbjct: 190  RVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVV 249

Query: 497  ILDIRSP----------KCAGC*IGEASFQCQCYSLGASELQAYLFRRG*QAGPHLGAAY 556
            ILDIRSP          + +   I  A   C+    G  + QA ++     AGP+     
Sbjct: 250  ILDIRSPTMPVAELERHQASVNAIAWAPQSCKHICSGGDDTQALIWELPTVAGPN----- 309

Query: 557  GCRPQWH*SNVHVILLHLKLTSCSGLPPNLIGLL*HFPTKMQLLKV 616
            G  P     +V+     +     S   P+ IG+   F  KMQLL+V
Sbjct: 310  GIDPM----SVYSAGSEINQLQWSSSQPDWIGIA--FANKMQLLRV 341

Query: 617   676
            
Sbjct: 370   341

Query: 677   736
            
Sbjct: 430   341

Query: 737   796
            
Sbjct: 490   341

Query: 797   856
            
Sbjct: 550   341

Query: 857   916
            
Sbjct: 610   341

Query: 917   976
            
Sbjct: 670   341

Query: 977   1036
            
Sbjct: 730   341

Query: 1037  1096
            
Sbjct: 790   341

Query: 1097  1156
            
Sbjct: 850   341

Query: 1157  1216
            
Sbjct: 910   341

Query: 1217  1244
            
Sbjct: 970   341

[Close]

BLAST of CU094562 vs. Swiss-Prot
Match: LWD1_ARATH (WD repeat-containing protein LWD1 OS=Arabidopsis thaliana GN=LWD1 PE=2 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 2.1e-74
Identity = 145/244 (59.43%), Postives = 173/244 (70.90%), Query Frame = -2


Query: 524  RSEFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPDSISIKA 583
            RSE + TYE+P  +YAM  S           R+A+ S +E+Y NRV+IV  D  +  I++
Sbjct: 18   RSE-IYTYEAPWHIYAMNWSVRRDKKY----RLAITSLLEQYPNRVEIVQLDESNGEIRS 77

Query: 584  NPSLSFEHPYPPTKLMFNPXXXXXXXXXXXXXXXX---WKLGD--SSIEPLSLLNNSKTS 643
            +P+LSFEHPYPPTK +F P                   W++ D  S +E  S LN++K S
Sbjct: 78   DPNLSFEHPYPPTKTIFIPDKECQRPDLLATSSDFLRLWRIADDHSRVELKSCLNSNKNS 137

Query: 644  EFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARVF 703
            EFC PLTSFDWNE EP+RIGTSS DTTCTIWDIE+  V+TQ IAHDKEV+DIAWG   VF
Sbjct: 138  EFCGPLTSFDWNEAEPRRIGTSSTDTTCTIWDIEREAVDTQLIAHDKEVFDIAWGGVGVF 197

Query: 704  ASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVILD 763
            ASVSADGSVR+FD+RDKEHSTIIYES +PDTPL+RL WNKQD RYMATI+MDS K+V+LD
Sbjct: 198  ASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLD 256

Query: 764  IRSP 823
            IR P
Sbjct: 258  IRFP 256

Query: 824   883
            
Sbjct: 318   256

Query: 884   943
            
Sbjct: 378   256

Query: 944   1003
            
Sbjct: 438   256

Query: 1004  1063
            
Sbjct: 498   256

Query: 1064  1123
            
Sbjct: 558   256

Query: 1124  1183
            
Sbjct: 618   256

Query: 1184  1241
            
Sbjct: 678   256

HSP 2 Score: 69.3 bits (168), Expect = 1.3e-10
Identity = 32/67 (47.76%), Postives = 43/67 (64.18%), Query Frame = -3


Query: 364 ATKLLFWTFAHQSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAG-- 423
           + K++       ++PV EL+RH +SVNAIAWAP S  HIC+AGDD QALIW++  +    
Sbjct: 245 SAKVVVLDIRFPALPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDISSMGQHV 304

Query: 424 PNGIDPM 483
             G+DP+
Sbjct: 305 EGGLDPI 311

Query: 484  543
           
Sbjct: 365  311

Query: 544  559
           
Sbjct: 425  311

HSP 3 Score: 45.8 bits (107), Expect = 1.5e-03
Identity = 18/27 (66.67%), Postives = 21/27 (77.78%), Query Frame = -1


Query: 276 YSAAFEINQLQWSAAQPDWIALAFSNK 335
           Y+A  EI QLQWS++QPDW+A+AFS K
Sbjct: 314 YTAGAEIEQLQWSSSQPDWVAIAFSTK 340

Query: 336  357
           
Sbjct: 374  340

[Close]

BLAST of CU094562 vs. Swiss-Prot
Match: LWD2_ARATH (WD repeat-containing protein LWD2 OS=Arabidopsis thaliana GN=LWD2 PE=2 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 7.5e-72
Identity = 142/249 (57.03%), Postives = 171/249 (68.67%), Query Frame = -2


Query: 524  EHAASRSEFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPDS 583
            E  + RSE + TYE+P  +YAM  S           R+A+ S +E+Y NRV+IV  D  +
Sbjct: 13   EEQSKRSE-IYTYEAPWQIYAMNWSIRRDKKY----RLAITSLIEQYPNRVEIVQLDESN 72

Query: 584  ISIKANPSLSFEHPYPPTKLMFNPXXXXXXXXXXXXXXXX---WKLGD--SSIEPLSLLN 643
              I+++P+L FEHPYPPTK  F P                   W++ D  S +E  S L+
Sbjct: 73   GEIRSDPNLCFEHPYPPTKTSFIPDKECQRPDLLATSSDFLRLWRISDDESRVELKSCLS 132

Query: 644  NSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWG 703
            + K SEF  P+TSFDWNE EP+RIGTSSIDTTCTIWDIE+ VV+TQ IAHDKEVYDIAWG
Sbjct: 133  SDKNSEFSGPITSFDWNEAEPRRIGTSSIDTTCTIWDIEREVVDTQLIAHDKEVYDIAWG 192

Query: 704  EARVFASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNK 763
               VFASVS DGSVR+FD+RDKEHSTIIYES +P TPL+RL+WNKQD RYMAT++M S K
Sbjct: 193  GVGVFASVSEDGSVRVFDLRDKEHSTIIYESGEPSTPLVRLSWNKQDPRYMATVIMGSAK 252

Query: 764  IVILDIRSP 823
            IV+LDIR P
Sbjct: 253  IVVLDIRFP 256

Query: 824   883
            
Sbjct: 313   256

Query: 884   943
            
Sbjct: 373   256

Query: 944   1003
            
Sbjct: 433   256

Query: 1004  1063
            
Sbjct: 493   256

Query: 1064  1123
            
Sbjct: 553   256

Query: 1124  1183
            
Sbjct: 613   256

Query: 1184  1243
            
Sbjct: 673   256

Query: 1244  1256
            
Sbjct: 733   256

HSP 2 Score: 71.6 bits (174), Expect = 2.5e-11
Identity = 33/67 (49.25%), Postives = 43/67 (64.18%), Query Frame = -3


Query: 364 ATKLLFWTFAHQSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAG-- 423
           + K++       ++PV EL+RH +SVNAIAWAP S  HICSAGDD QALIW++  +    
Sbjct: 245 SAKIVVLDIRFPALPVVELQRHQASVNAIAWAPHSSSHICSAGDDSQALIWDISSMGQHV 304

Query: 424 PNGIDPM 483
             G+DP+
Sbjct: 305 EGGLDPI 311

Query: 484  543
           
Sbjct: 365  311

Query: 544  559
           
Sbjct: 425  311

HSP 3 Score: 47.8 bits (112), Expect = 3.9e-04
Identity = 18/27 (66.67%), Postives = 22/27 (81.48%), Query Frame = -1


Query: 276 YSAAFEINQLQWSAAQPDWIALAFSNK 335
           Y+A  E+ QLQWS++QPDW+A+AFSNK
Sbjct: 314 YTAGAEVEQLQWSSSQPDWVAIAFSNK 340

Query: 336  357
           
Sbjct: 374  340

[Close]

BLAST of CU094562 vs. Swiss-Prot
Match: DCAF7_HUMAN (DDB1- and CUL4-associated factor 7 OS=Homo sapiens GN=DCAF7 PE=1 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 8.9e-57
Identity = 127/250 (50.80%), Postives = 153/250 (61.20%), Query Frame = -2


Query: 524  YESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPDSISIKANPSLSFE 583
            YE+P  +YAM  S           R+ALGSFVEEYNN+V +V  D +S       +  F+
Sbjct: 13   YEAPWTVYAMNWSVRPDKRF----RLALGSFVEEYNNKVQLVGLDEESSEFICRNT--FD 72

Query: 584  HPYPPTKLMFNPXXXXXXXXXXXXXXXX---WKLGDSSIEPLSLLNNSKTSEFCAPLTSF 643
            HPYP TKLM+ P                   W++G++      LLNN+K S+FCAPLTSF
Sbjct: 73   HPYPTTKLMWIPDTKGVYPDLLATSGDYLRVWRVGETETRLECLLNNNKNSDFCAPLTSF 132

Query: 644  DWNEVEPKRIGTSSIDTTCTIWDIE-----------KSVVETQFIAHDKEVYDIAWGEA- 703
            DWNEV+P  +GTSSIDTTCTIW +E              V+TQ IAHDKEVYDIA+  A 
Sbjct: 133  DWNEVDPYLLGTSSIDTTCTIWGLETGQVLGRVNLVSGHVKTQLIAHDKEVYDIAFSRAG 192

Query: 704  ---RVFASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSN 763
                +FASV ADGSVR+FD+R  EHSTIIYE PQ   PLLRL WNKQD  Y+AT+ MD  
Sbjct: 193  GGRDMFASVGADGSVRMFDLRHLEHSTIIYEDPQ-HHPLLRLCWNKQDPNYLATMAMDGM 252

Query: 764  KIVILDIRSP 823
            ++VILD+R P
Sbjct: 253  EVVILDVRVP 255

Query: 824   883
            
Sbjct: 313   255

Query: 884   943
            
Sbjct: 373   255

Query: 944   1003
            
Sbjct: 433   255

Query: 1004  1063
            
Sbjct: 493   255

Query: 1064  1123
            
Sbjct: 553   255

Query: 1124  1183
            
Sbjct: 613   255

Query: 1184  1220
            
Sbjct: 673   255

HSP 2 Score: 57.0 bits (136), Expect = 6.5e-07
Identity = 24/39 (61.54%), Postives = 26/39 (66.67%), Query Frame = -3


Query: 400 PVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWEL 459
           PVA L  H + VN IAWAP S  HIC+A DD QALIW++
Sbjct: 258 PVARLNNHRACVNGIAWAPHSSCHICTAADDHQALIWDI 296

Query: 460  517
           
Sbjct: 318  296

HSP 3 Score: 39.7 bits (91), Expect = 1.1e-01
Identity = 14/26 (53.85%), Postives = 19/26 (73.08%), Query Frame = -1


Query: 279 YSAAFEINQLQWSAAQPDWIALAFSN 338
           Y+A  EIN +QW++ QPDWIA+ ++N
Sbjct: 310 YTAEGEINNVQWASTQPDWIAICYNN 335

Query: 339  357
           
Sbjct: 370  335

[Close]

BLAST of CU094562 vs. Swiss-Prot
Match: DCAF7_MOUSE (DDB1- and CUL4-associated factor 7 OS=Mus musculus GN=Dcaf7 PE=1 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 8.9e-57
Identity = 127/250 (50.80%), Postives = 153/250 (61.20%), Query Frame = -2


Query: 524  YESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPDSISIKANPSLSFE 583
            YE+P  +YAM  S           R+ALGSFVEEYNN+V +V  D +S       +  F+
Sbjct: 13   YEAPWTVYAMNWSVRPDKRF----RLALGSFVEEYNNKVQLVGLDEESSEFICRNT--FD 72

Query: 584  HPYPPTKLMFNPXXXXXXXXXXXXXXXX---WKLGDSSIEPLSLLNNSKTSEFCAPLTSF 643
            HPYP TKLM+ P                   W++G++      LLNN+K S+FCAPLTSF
Sbjct: 73   HPYPTTKLMWIPDTKGVYPDLLATSGDYLRVWRVGETETRLECLLNNNKNSDFCAPLTSF 132

Query: 644  DWNEVEPKRIGTSSIDTTCTIWDIE-----------KSVVETQFIAHDKEVYDIAWGEA- 703
            DWNEV+P  +GTSSIDTTCTIW +E              V+TQ IAHDKEVYDIA+  A 
Sbjct: 133  DWNEVDPYLLGTSSIDTTCTIWGLETGQVLGRVNLVSGHVKTQLIAHDKEVYDIAFSRAG 192

Query: 704  ---RVFASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSN 763
                +FASV ADGSVR+FD+R  EHSTIIYE PQ   PLLRL WNKQD  Y+AT+ MD  
Sbjct: 193  GGRDMFASVGADGSVRMFDLRHLEHSTIIYEDPQ-HHPLLRLCWNKQDPNYLATMAMDGM 252

Query: 764  KIVILDIRSP 823
            ++VILD+R P
Sbjct: 253  EVVILDVRVP 255

Query: 824   883
            
Sbjct: 313   255

Query: 884   943
            
Sbjct: 373   255

Query: 944   1003
            
Sbjct: 433   255

Query: 1004  1063
            
Sbjct: 493   255

Query: 1064  1123
            
Sbjct: 553   255

Query: 1124  1183
            
Sbjct: 613   255

Query: 1184  1220
            
Sbjct: 673   255

HSP 2 Score: 57.0 bits (136), Expect = 6.5e-07
Identity = 24/39 (61.54%), Postives = 26/39 (66.67%), Query Frame = -3


Query: 400 PVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWEL 459
           PVA L  H + VN IAWAP S  HIC+A DD QALIW++
Sbjct: 258 PVARLNNHRACVNGIAWAPHSSCHICTAADDHQALIWDI 296

Query: 460  517
           
Sbjct: 318  296

HSP 3 Score: 39.7 bits (91), Expect = 1.1e-01
Identity = 14/26 (53.85%), Postives = 19/26 (73.08%), Query Frame = -1


Query: 279 YSAAFEINQLQWSAAQPDWIALAFSN 338
           Y+A  EIN +QW++ QPDWIA+ ++N
Sbjct: 310 YTAEGEINNVQWASTQPDWIAICYNN 335

Query: 339  357
           
Sbjct: 370  335

[Close]

BLAST of CU094562 vs. TrEMBL
Match: B7SBL6_CUCSA (WD-repeat protein OS=Cucumis sativus GN=TTG1 PE=2 SV=1)

HSP 1 Score: 463.4 bits (1191), Expect = 3.3e-127
Identity = 251/344 (72.97%), Postives = 261/344 (75.87%), Query Frame = -2


Query: 257  MEHAASRSEFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD 316
            MEHAASRSEFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD
Sbjct: 1    MEHAASRSEFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD 60

Query: 317  SISIKANPSLSFEHPYPPTKLMFNPXXXXXXXXXXXXXXXXWKLGDSSIEPLSLLNNSKT 376
            SISIKANPSLSFEHPYPPTKLMFNP                WKLGDSSIEPLSLLNNSKT
Sbjct: 61   SISIKANPSLSFEHPYPPTKLMFNPSPLSSLLASSGDSLRLWKLGDSSIEPLSLLNNSKT 120

Query: 377  SEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV 436
            SEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV
Sbjct: 121  SEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV 180

Query: 437  FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVIL 496
            FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVIL
Sbjct: 181  FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVIL 240

Query: 497  DIRSPKCAGC----------*IGEASFQCQCYSLGASELQAYLFRRG*QAGPHLGAAYGC 556
            DIRSP                I  A   C+       + QA ++     AGP+     G 
Sbjct: 241  DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPN-----GI 300

Query: 557  RPQWH*SNVHVILLHLKLTSCSGLPPNLIGLL*HFPTKMQLLKV 616
             P     +++     +     S   P+ I L   F  KMQLLKV
Sbjct: 301  DPM----SMYSAAFEINQLQWSAAQPDWIALA--FSNKMQLLKV 333

Query: 617   676
            
Sbjct: 361   333

Query: 677   736
            
Sbjct: 421   333

Query: 737   796
            
Sbjct: 481   333

Query: 797   856
            
Sbjct: 541   333

Query: 857   916
            
Sbjct: 601   333

Query: 917   976
            
Sbjct: 661   333

Query: 977   1036
            
Sbjct: 721   333

Query: 1037  1096
            
Sbjct: 781   333

Query: 1097  1156
            
Sbjct: 841   333

Query: 1157  1216
            
Sbjct: 901   333

Query: 1217  1259
            
Sbjct: 961   333

[Close]

BLAST of CU094562 vs. TrEMBL
Match: X2EXM4_9ROSA (TTG1 protein OS=Malus hybrid cultivar GN=TTG1 PE=2 SV=1)

HSP 1 Score: 383.3 bits (983), Expect = 4.4e-103
Identity = 205/343 (59.77%), Postives = 244/343 (71.14%), Query Frame = -2


Query: 257  RSEFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPDSISIKA 316
            R+E   TYESP+PLYAMA++SP   + +   RIA+GSF+EEY+NRVDI+SFDPD++SIK 
Sbjct: 11   RAENSVTYESPYPLYAMALASPQTRTRHQHHRIAVGSFIEEYSNRVDILSFDPDTLSIKP 70

Query: 317  NPSLSFEHPYPPTKLMFNPXXXXXXXXXXXXXXXX-----WKLGDSSIEPLSLLNNSKTS 376
            NP+LSF+HPYPPTKLMF+P                     W++GDS++EP+ +LNNSKTS
Sbjct: 71   NPTLSFDHPYPPTKLMFHPNPNALHKTNDVLASSGDYLRLWEVGDSTVEPIQVLNNSKTS 130

Query: 377  EFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARVF 436
            EFCAPLTSFDWN++EP+RIGTSSIDTTCTIWDIEK VVETQ IAHDKEVYDIAWGEARVF
Sbjct: 131  EFCAPLTSFDWNDIEPRRIGTSSIDTTCTIWDIEKGVVETQLIAHDKEVYDIAWGEARVF 190

Query: 437  ASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVILD 496
            ASVSADGSVRIFD+RDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNK+VILD
Sbjct: 191  ASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILD 250

Query: 497  IRSP----------KCAGC*IGEASFQCQCYSLGASELQAYLFRRG*QAGPHLGAAYGCR 556
            IRSP          + +   I  A   C+    G  + QA ++     AGP+     G  
Sbjct: 251  IRSPTMPVAELERHRGSVNAIAWAPQSCRHICSGGDDTQALIWDLPTVAGPN-----GID 310

Query: 557  PQWH*SNVHVILLHLKLTSCSGLPPNLIGLL*HFPTKMQLLKV 616
            P     +++     +     S   P+ I +   F  KMQLLKV
Sbjct: 311  PM----SMYSAGAEINQLQWSAAQPDWISIA--FSNKMQLLKV 342

Query: 617   676
            
Sbjct: 371   342

Query: 677   736
            
Sbjct: 431   342

Query: 737   796
            
Sbjct: 491   342

Query: 797   856
            
Sbjct: 551   342

Query: 857   916
            
Sbjct: 611   342

Query: 917   976
            
Sbjct: 671   342

Query: 977   1036
            
Sbjct: 731   342

Query: 1037  1096
            
Sbjct: 791   342

Query: 1097  1156
            
Sbjct: 851   342

Query: 1157  1216
            
Sbjct: 911   342

Query: 1217  1241
            
Sbjct: 971   342

[Close]

BLAST of CU094562 vs. TrEMBL
Match: A0A059U7J8_9ROSA (Transcription factor WD40 OS=Malus hybrid cultivar PE=2 SV=1)

HSP 1 Score: 383.3 bits (983), Expect = 4.4e-103
Identity = 205/343 (59.77%), Postives = 243/343 (70.85%), Query Frame = -2


Query: 257  RSEFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPDSISIKA 316
            R+E   TYESP+PLYAMA +SP   + +   RIA+GSF+EEY+NRVDI+SFDPD++SIK 
Sbjct: 11   RAENSVTYESPYPLYAMAFASPQTRTRHQHHRIAVGSFIEEYSNRVDILSFDPDTLSIKP 70

Query: 317  NPSLSFEHPYPPTKLMFNPXXXXXXXXXXXXXXXX-----WKLGDSSIEPLSLLNNSKTS 376
            NP+LSF+HPYPPTKLMF+P                     W++GDS++EP+ +LNNSKTS
Sbjct: 71   NPTLSFDHPYPPTKLMFHPNPNALHKTNDVLASSGDYLRLWEVGDSTVEPIQVLNNSKTS 130

Query: 377  EFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARVF 436
            EFCAPLTSFDWN++EP+RIGTSSIDTTCTIWDIEK VVETQ IAHDKEVYDIAWGEARVF
Sbjct: 131  EFCAPLTSFDWNDIEPRRIGTSSIDTTCTIWDIEKGVVETQLIAHDKEVYDIAWGEARVF 190

Query: 437  ASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVILD 496
            ASVSADGSVRIFD+RDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNK+VILD
Sbjct: 191  ASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILD 250

Query: 497  IRSP----------KCAGC*IGEASFQCQCYSLGASELQAYLFRRG*QAGPHLGAAYGCR 556
            IRSP          + +   I  A   C+       + QA ++     AGP+     G  
Sbjct: 251  IRSPTMPVAELERHRGSVNAIAWAPQSCRHICSAGDDTQALIWDLPTVAGPN-----GID 310

Query: 557  PQWH*SNVHVILLHLKLTSCSGLPPNLIGLL*HFPTKMQLLKV 616
            P     +++     +     S   P+ I +   FP KMQLLKV
Sbjct: 311  PM----SMYSAGAEINQLQWSAAQPDWISIA--FPNKMQLLKV 342

Query: 617   676
            
Sbjct: 371   342

Query: 677   736
            
Sbjct: 431   342

Query: 737   796
            
Sbjct: 491   342

Query: 797   856
            
Sbjct: 551   342

Query: 857   916
            
Sbjct: 611   342

Query: 917   976
            
Sbjct: 671   342

Query: 977   1036
            
Sbjct: 731   342

Query: 1037  1096
            
Sbjct: 791   342

Query: 1097  1156
            
Sbjct: 851   342

Query: 1157  1216
            
Sbjct: 911   342

Query: 1217  1241
            
Sbjct: 971   342

[Close]

BLAST of CU094562 vs. TrEMBL
Match: Q9M610_MALDO (TTG1 OS=Malus domestica PE=2 SV=1)

HSP 1 Score: 380.2 bits (975), Expect = 3.7e-102
Identity = 183/244 (75.00%), Postives = 208/244 (85.25%), Query Frame = -2


Query: 524  RSEFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPDSISIKA 583
            R+E   TYESP+PLYAMA +SP   + +   RIA+GSF+EEY+NRVDI+SFDPD++SIK 
Sbjct: 11   RAENSVTYESPYPLYAMAFASPQTRTRHQHHRIAVGSFIEEYSNRVDILSFDPDTLSIKP 70

Query: 584  NPSLSFEHPYPPTKLMFNPXXXXXXXXXXXXXXXX-----WKLGDSSIEPLSLLNNSKTS 643
            NP+LSF+HPYPPTKLMF+P                     W++GDS++EP+ +LNNSKTS
Sbjct: 71   NPTLSFDHPYPPTKLMFHPNPNALHKTNDVLASSGDYLRLWEVGDSTVEPIQVLNNSKTS 130

Query: 644  EFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARVF 703
            EFCAPLTSFDWN++EP+RIGTSSIDTTCTIWDIEK VVETQ IAHDKEVYDIAWGEARVF
Sbjct: 131  EFCAPLTSFDWNDIEPRRIGTSSIDTTCTIWDIEKGVVETQLIAHDKEVYDIAWGEARVF 190

Query: 704  ASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVILD 763
            ASVSADGSVRIFD+RDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNK+VILD
Sbjct: 191  ASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILD 250

Query: 764  IRSP 823
            IRSP
Sbjct: 251  IRSP 254

Query: 824   883
            
Sbjct: 311   254

Query: 884   943
            
Sbjct: 371   254

Query: 944   1003
            
Sbjct: 431   254

Query: 1004  1063
            
Sbjct: 491   254

Query: 1064  1123
            
Sbjct: 551   254

Query: 1124  1183
            
Sbjct: 611   254

Query: 1184  1241
            
Sbjct: 671   254

[Close]

BLAST of CU094562 vs. TrEMBL
Match: Q9M610_MALDO (TTG1 OS=Malus domestica PE=2 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 1.4e-19
Identity = 48/67 (71.64%), Postives = 55/67 (82.09%), Query Frame = -3


Query: 358 ATKLLFWTFAHQSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPN 417
           + K++       ++PVAELERH  SVNAIAWAP+SCRHICSAGDD QALIW+LP VAGPN
Sbjct: 243 SNKVVILDIRSPTMPVAELERHRGSVNAIAWAPQSCRHICSAGDDTQALIWDLPTVAGPN 302

Query: 418 GIDPMSM 477
           GIDPMSM
Sbjct: 303 GIDPMSM 309

Query: 478  537
           
Sbjct: 363  309

Query: 538  559
           
Sbjct: 423  309

HSP 2 Score: 53.1 bits (126), Expect = 1.0e-03
Identity = 23/27 (85.19%), Postives = 25/27 (92.59%), Query Frame = -1


Query: 276 YSAAFEINQLQWSAAQPDWIALAFSNK 335
           YSA  EINQLQWSAAQPDWI++AFSNK
Sbjct: 310 YSAGAEINQLQWSAAQPDWISIAFSNK 336

Query: 336  357
           
Sbjct: 370  336

HSP 3 Score: 378.6 bits (971), Expect = 1.1e-101
Identity = 186/254 (73.23%), Postives = 211/254 (83.07%), Query Frame = -2


Query: 524  MEHAASRS----EFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVS 583
            ME++A  S    E   TYESP+PLYAMA SSP   + +   RIA+GSF+EEY+NRVDI+S
Sbjct: 1    MENSAQESHLGQENSVTYESPYPLYAMAFSSPQTRNRHQHHRIAVGSFIEEYSNRVDILS 60

Query: 584  FDPDSISIKANPSLSFEHPYPPTKLMFNPXXXXXXXXXXXXXXXX-----WKLGDSSIEP 643
            FDPD++S+K NP+LSF+HPYPPTKLMF+P                     W++ DSS+EP
Sbjct: 61   FDPDTLSVKPNPTLSFDHPYPPTKLMFHPNPNSLHKSNDVSASSGDYLRLWEVRDSSVEP 120

Query: 644  LSLLNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVY 703
            + +LNNSKTSEFCAPLTSFDWN++EP+RIGTSSIDTTCTIWDIEK VVETQ IAHDKEVY
Sbjct: 121  IQVLNNSKTSEFCAPLTSFDWNDIEPRRIGTSSIDTTCTIWDIEKGVVETQLIAHDKEVY 180

Query: 704  DIAWGEARVFASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATIL 763
            DIAWGEARVFASVSADGSVRIFD+RDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATIL
Sbjct: 181  DIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATIL 240

Query: 764  MDSNKIVILDIRSP 823
            MDSNK+VILDIRSP
Sbjct: 241  MDSNKVVILDIRSP 254

Query: 824   883
            
Sbjct: 301   254

Query: 884   943
            
Sbjct: 361   254

Query: 944   1003
            
Sbjct: 421   254

Query: 1004  1063
            
Sbjct: 481   254

Query: 1064  1123
            
Sbjct: 541   254

Query: 1124  1183
            
Sbjct: 601   254

Query: 1184  1243
            
Sbjct: 661   254

Query: 1244  1259
            
Sbjct: 721   254

[Close]

BLAST of CU094562 vs. NCBI nr
Match: gi|525507294|ref|NP_001267687.1| (protein TRANSPARENT TESTA GLABRA 1-like [Cucumis sativus])

HSP 1 Score: 466.8 bits (1200), Expect = 4.3e-128
Identity = 251/344 (72.97%), Postives = 261/344 (75.87%), Query Frame = -2


Query: 257  MEHAASRSEFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD 316
            MEHAASRSEFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD
Sbjct: 1    MEHAASRSEFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD 60

Query: 317  SISIKANPSLSFEHPYPPTKLMFNPXXXXXXXXXXXXXXXXWKLGDSSIEPLSLLNNSKT 376
            SISIKANPSLSFEHPYPPTKLMFNP                WKLGDSSIEPLSLLNNSKT
Sbjct: 61   SISIKANPSLSFEHPYPPTKLMFNPSPLSSLLASSGDSLRLWKLGDSSIEPLSLLNNSKT 120

Query: 377  SEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV 436
            SEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV
Sbjct: 121  SEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV 180

Query: 437  FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVIL 496
            FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVIL
Sbjct: 181  FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVIL 240

Query: 497  DIRSPKCAGC----------*IGEASFQCQCYSLGASELQAYLFRRG*QAGPHLGAAYGC 556
            DIRSP                I  A   C+       + QA ++     AGP+     G 
Sbjct: 241  DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPN-----GI 300

Query: 557  RPQWH*SNVHVILLHLKLTSCSGLPPNLIGLL*HFPTKMQLLKV 616
             P     +++     +     S   P+ I L   F  KMQLLKV
Sbjct: 301  DPM----SMYSAAFEINQLQWSAAQPDWIALA--FSNKMQLLKV 333

Query: 617   676
            
Sbjct: 361   333

Query: 677   736
            
Sbjct: 421   333

Query: 737   796
            
Sbjct: 481   333

Query: 797   856
            
Sbjct: 541   333

Query: 857   916
            
Sbjct: 601   333

Query: 917   976
            
Sbjct: 661   333

Query: 977   1036
            
Sbjct: 721   333

Query: 1037  1096
            
Sbjct: 781   333

Query: 1097  1156
            
Sbjct: 841   333

Query: 1157  1216
            
Sbjct: 901   333

Query: 1217  1259
            
Sbjct: 961   333

[Close]

BLAST of CU094562 vs. NCBI nr
Match: gi|659111171|ref|XP_008455615.1| (PREDICTED: protein TRANSPARENT TESTA GLABRA 1 [Cucumis melo])

HSP 1 Score: 455.7 bits (1171), Expect = 1.0e-124
Identity = 245/344 (71.22%), Postives = 259/344 (75.29%), Query Frame = -2


Query: 257  MEHAASRSEFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD 316
            ME+AASRSEFLATY+SPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD
Sbjct: 1    MENAASRSEFLATYDSPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD 60

Query: 317  SISIKANPSLSFEHPYPPTKLMFNPXXXXXXXXXXXXXXXXWKLGDSSIEPLSLLNNSKT 376
            S+SIK NPSLSFEHPYPPTKLMFNP                WK+GDSSIEPLSLLNNSKT
Sbjct: 61   SVSIKTNPSLSFEHPYPPTKLMFNPSPLSSLLASSGDSLRLWKVGDSSIEPLSLLNNSKT 120

Query: 377  SEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV 436
            SEFCAPLTSFDWNEVE KRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV
Sbjct: 121  SEFCAPLTSFDWNEVELKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV 180

Query: 437  FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVIL 496
            FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVIL
Sbjct: 181  FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVIL 240

Query: 497  DIRSPKCAGC----------*IGEASFQCQCYSLGASELQAYLFRRG*QAGPHLGAAYGC 556
            DIRSP                I  A   C+       + QA ++     AGP+     G 
Sbjct: 241  DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPN-----GI 300

Query: 557  RPQWH*SNVHVILLHLKLTSCSGLPPNLIGLL*HFPTKMQLLKV 616
             P     +++     +     S   P+ I L   F  KMQLLKV
Sbjct: 301  DPM----SMYSAACEINQLQWSAAQPDWIALA--FSNKMQLLKV 333

Query: 617   676
            
Sbjct: 361   333

Query: 677   736
            
Sbjct: 421   333

Query: 737   796
            
Sbjct: 481   333

Query: 797   856
            
Sbjct: 541   333

Query: 857   916
            
Sbjct: 601   333

Query: 917   976
            
Sbjct: 661   333

Query: 977   1036
            
Sbjct: 721   333

Query: 1037  1096
            
Sbjct: 781   333

Query: 1097  1156
            
Sbjct: 841   333

Query: 1157  1216
            
Sbjct: 901   333

Query: 1217  1259
            
Sbjct: 961   333

[Close]

BLAST of CU094562 vs. NCBI nr
Match: gi|633366308|gb|AHZ56765.1| (transcription factor WD40 [Malus hybrid cultivar])

HSP 1 Score: 387.1 bits (993), Expect = 4.4e-104
Identity = 205/343 (59.77%), Postives = 243/343 (70.85%), Query Frame = -2


Query: 257  RSEFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPDSISIKA 316
            R+E   TYESP+PLYAMA +SP   + +   RIA+GSF+EEY+NRVDI+SFDPD++SIK 
Sbjct: 11   RAENSVTYESPYPLYAMAFASPQTRTRHQHHRIAVGSFIEEYSNRVDILSFDPDTLSIKP 70

Query: 317  NPSLSFEHPYPPTKLMFNPXXXXXXXXXXXXXXXX-----WKLGDSSIEPLSLLNNSKTS 376
            NP+LSF+HPYPPTKLMF+P                     W++GDS++EP+ +LNNSKTS
Sbjct: 71   NPTLSFDHPYPPTKLMFHPNPNALHKTNDVLASSGDYLRLWEVGDSTVEPIQVLNNSKTS 130

Query: 377  EFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARVF 436
            EFCAPLTSFDWN++EP+RIGTSSIDTTCTIWDIEK VVETQ IAHDKEVYDIAWGEARVF
Sbjct: 131  EFCAPLTSFDWNDIEPRRIGTSSIDTTCTIWDIEKGVVETQLIAHDKEVYDIAWGEARVF 190

Query: 437  ASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVILD 496
            ASVSADGSVRIFD+RDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNK+VILD
Sbjct: 191  ASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILD 250

Query: 497  IRSP----------KCAGC*IGEASFQCQCYSLGASELQAYLFRRG*QAGPHLGAAYGCR 556
            IRSP          + +   I  A   C+       + QA ++     AGP+     G  
Sbjct: 251  IRSPTMPVAELERHRGSVNAIAWAPQSCRHICSAGDDTQALIWDLPTVAGPN-----GID 310

Query: 557  PQWH*SNVHVILLHLKLTSCSGLPPNLIGLL*HFPTKMQLLKV 616
            P     +++     +     S   P+ I +   FP KMQLLKV
Sbjct: 311  PM----SMYSAGAEINQLQWSAAQPDWISIA--FPNKMQLLKV 342

Query: 617   676
            
Sbjct: 371   342

Query: 677   736
            
Sbjct: 431   342

Query: 737   796
            
Sbjct: 491   342

Query: 797   856
            
Sbjct: 551   342

Query: 857   916
            
Sbjct: 611   342

Query: 917   976
            
Sbjct: 671   342

Query: 977   1036
            
Sbjct: 731   342

Query: 1037  1096
            
Sbjct: 791   342

Query: 1097  1156
            
Sbjct: 851   342

Query: 1157  1216
            
Sbjct: 911   342

Query: 1217  1241
            
Sbjct: 971   342

[Close]

BLAST of CU094562 vs. NCBI nr
Match: gi|595597718|gb|AHM88209.1| (TTG1 protein [Malus hybrid cultivar])

HSP 1 Score: 387.1 bits (993), Expect = 4.4e-104
Identity = 205/343 (59.77%), Postives = 244/343 (71.14%), Query Frame = -2


Query: 257  RSEFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPDSISIKA 316
            R+E   TYESP+PLYAMA++SP   + +   RIA+GSF+EEY+NRVDI+SFDPD++SIK 
Sbjct: 11   RAENSVTYESPYPLYAMALASPQTRTRHQHHRIAVGSFIEEYSNRVDILSFDPDTLSIKP 70

Query: 317  NPSLSFEHPYPPTKLMFNPXXXXXXXXXXXXXXXX-----WKLGDSSIEPLSLLNNSKTS 376
            NP+LSF+HPYPPTKLMF+P                     W++GDS++EP+ +LNNSKTS
Sbjct: 71   NPTLSFDHPYPPTKLMFHPNPNALHKTNDVLASSGDYLRLWEVGDSTVEPIQVLNNSKTS 130

Query: 377  EFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARVF 436
            EFCAPLTSFDWN++EP+RIGTSSIDTTCTIWDIEK VVETQ IAHDKEVYDIAWGEARVF
Sbjct: 131  EFCAPLTSFDWNDIEPRRIGTSSIDTTCTIWDIEKGVVETQLIAHDKEVYDIAWGEARVF 190

Query: 437  ASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVILD 496
            ASVSADGSVRIFD+RDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNK+VILD
Sbjct: 191  ASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILD 250

Query: 497  IRSP----------KCAGC*IGEASFQCQCYSLGASELQAYLFRRG*QAGPHLGAAYGCR 556
            IRSP          + +   I  A   C+    G  + QA ++     AGP+     G  
Sbjct: 251  IRSPTMPVAELERHRGSVNAIAWAPQSCRHICSGGDDTQALIWDLPTVAGPN-----GID 310

Query: 557  PQWH*SNVHVILLHLKLTSCSGLPPNLIGLL*HFPTKMQLLKV 616
            P     +++     +     S   P+ I +   F  KMQLLKV
Sbjct: 311  PM----SMYSAGAEINQLQWSAAQPDWISIA--FSNKMQLLKV 342

Query: 617   676
            
Sbjct: 371   342

Query: 677   736
            
Sbjct: 431   342

Query: 737   796
            
Sbjct: 491   342

Query: 797   856
            
Sbjct: 551   342

Query: 857   916
            
Sbjct: 611   342

Query: 917   976
            
Sbjct: 671   342

Query: 977   1036
            
Sbjct: 731   342

Query: 1037  1096
            
Sbjct: 791   342

Query: 1097  1156
            
Sbjct: 851   342

Query: 1157  1216
            
Sbjct: 911   342

Query: 1217  1241
            
Sbjct: 971   342

[Close]

BLAST of CU094562 vs. NCBI nr
Match: gi|645257921|ref|XP_008234637.1| (PREDICTED: protein TRANSPARENT TESTA GLABRA 1 isoform X2 [Prunus mume])

HSP 1 Score: 382.1 bits (980), Expect = 1.4e-102
Identity = 206/353 (58.36%), Postives = 244/353 (69.12%), Query Frame = -2


Query: 257  MEHAASRS----EFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVS 316
            ME++A  S    E   TYESP+PLYAMA S P   + +   RIA+GSF+EEY+NRVDI+S
Sbjct: 1    MENSAQESHLGQENSVTYESPYPLYAMAFSPPQTRNRHQHHRIAVGSFIEEYSNRVDILS 60

Query: 317  FDPDSISIKANPSLSFEHPYPPTKLMFNPXXXXXXXXXXXXXXXX-----WKLGDSSIEP 376
            FDPD++S+K NP+LSF+HPYPPTKLMF+P                     W++ DSS+EP
Sbjct: 61   FDPDTLSVKPNPTLSFDHPYPPTKLMFHPNPNSLHKSNDVLASSGDYLRLWEVRDSSVEP 120

Query: 377  LSLLNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVY 436
            + +LNNSKTSEFCAPLTSFDWN++EP+RIGTSSIDTTCTIWDIEK VVETQ IAHDKEVY
Sbjct: 121  IQVLNNSKTSEFCAPLTSFDWNDIEPRRIGTSSIDTTCTIWDIEKGVVETQLIAHDKEVY 180

Query: 437  DIAWGEARVFASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATIL 496
            DIAWGEARVFASVSADGSVRIFD+RDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATIL
Sbjct: 181  DIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATIL 240

Query: 497  MDSNKIVILDIRSP----------KCAGC*IGEASFQCQCYSLGASELQAYLFRRG*QAG 556
            MDSNK+VILDIRSP          + +   I  A   C+       + QA ++     AG
Sbjct: 241  MDSNKVVILDIRSPTMPVAELERHRASVNAIAWAPQSCRHICSAGDDTQALIWELPTVAG 300

Query: 557  PHLGAAYGCRPQWH*SNVHVILLHLKLTSCSGLPPNLIGLL*HFPTKMQLLKV 616
            P+     G  P     +++     +     S   P+ I +   F  KMQLLKV
Sbjct: 301  PN-----GIDPM----SMYSAGAEINQLQWSAAQPDWISIA--FSNKMQLLKV 342

Query: 617   676
            
Sbjct: 361   342

Query: 677   736
            
Sbjct: 421   342

Query: 737   796
            
Sbjct: 481   342

Query: 797   856
            
Sbjct: 541   342

Query: 857   916
            
Sbjct: 601   342

Query: 917   976
            
Sbjct: 661   342

Query: 977   1036
            
Sbjct: 721   342

Query: 1037  1096
            
Sbjct: 781   342

Query: 1097  1156
            
Sbjct: 841   342

Query: 1157  1216
            
Sbjct: 901   342

Query: 1217  1259
            
Sbjct: 961   342

The following BLAST results are available for this feature:

BLAST of CU094562 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TTG1_ARATH	1.7e-100	58.96	Protein TRANSPARENT TESTA GLABRA 1 OS=Arabidopsis thaliana GN=TTG1 PE=1 SV=1	[more]
LWD1_ARATH	2.1e-74	59.43	WD repeat-containing protein LWD1 OS=Arabidopsis thaliana GN=LWD1 PE=2 SV=1	[more]
LWD2_ARATH	7.5e-72	57.03	WD repeat-containing protein LWD2 OS=Arabidopsis thaliana GN=LWD2 PE=2 SV=1	[more]
DCAF7_HUMAN	8.9e-57	50.80	DDB1- and CUL4-associated factor 7 OS=Homo sapiens GN=DCAF7 PE=1 SV=1	[more]
DCAF7_MOUSE	8.9e-57	50.80	DDB1- and CUL4-associated factor 7 OS=Mus musculus GN=Dcaf7 PE=1 SV=1	[more]

BLAST of CU094562 vs. TrEMBL


Match Name	E-value	Identity	Description
B7SBL6_CUCSA	3.3e-127	72.97	WD-repeat protein OS=Cucumis sativus GN=TTG1 PE=2 SV=1	[more]
X2EXM4_9ROSA	4.4e-103	59.77	TTG1 protein OS=Malus hybrid cultivar GN=TTG1 PE=2 SV=1	[more]
A0A059U7J8_9ROSA	4.4e-103	59.77	Transcription factor WD40 OS=Malus hybrid cultivar PE=2 SV=1	[more]
Q9M610_MALDO	3.7e-102	75.00	TTG1 OS=Malus domestica PE=2 SV=1	[more]
Q9M610_MALDO	1.4e-19	71.64	TTG1 OS=Malus domestica PE=2 SV=1	[more]

BLAST of CU094562 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|525507294\|ref\|NP_001267687.1\|	4.3e-128	72.97	protein TRANSPARENT TESTA GLABRA 1-like [Cucumis sativus]	[more]
gi\|659111171\|ref\|XP_008455615.1\|	1.0e-124	71.22	PREDICTED: protein TRANSPARENT TESTA GLABRA 1 [Cucumis melo]	[more]
gi\|633366308\|gb\|AHZ56765.1\|	4.4e-104	59.77	transcription factor WD40 [Malus hybrid cultivar]	[more]
gi\|595597718\|gb\|AHM88209.1\|	4.4e-104	59.77	TTG1 protein [Malus hybrid cultivar]	[more]
gi\|645257921\|ref\|XP_008234637.1\|	1.4e-102	58.36	PREDICTED: protein TRANSPARENT TESTA GLABRA 1 isoform X2 [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition
IPR001680	WD40_repeat
IPR015943	WD40/YVTN_repeat-like_dom_sf
IPR017986	WD40_repeat_dom
IPR019775	WD40_repeat_CS

Vocabulary: **Biological Process**
Term	Definition
GO:0007275	multicellular organism development

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This transcribed_cluster is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007275	multicellular organism development
molecular_function	GO:0005515	protein binding

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
Csa4G097650	Csa4G097650	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
EU215443	EU215443	EST
FKNP3UI02K3V7H	FKNP3UI02K3V7H	EST
G0033111	G0033111	EST
G0088561	G0088561	EST
G0139246	G0139246	EST
G0172301	G0172301	EST
G0177147	G0177147	EST
H0028290	H0028290	EST
H0116526	H0116526	EST

InterPro

Analysis Name: InterPro Annotations of cucumber unigene v3
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 163..194 score: 0.095coord: 249..284 score: 0
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 245..285 score: 1.3E-5coord: 65..103 score: 8.9coord: 156..194 score: 1.4E-4coord: 108..153 score:
IPR001680	WD40 repeat	PROFILE	PS50082	WD_REPEATS_2	coord: 252..286 score: 9.74coord: 163..203 score: 9
IPR015943	WD40/YVTN repeat-like-containing domain	GENE3D	G3DSA:2.130.10.10		coord: 63..286 score: 7.3
IPR017986	WD40-repeat-containing domain	PROFILE	PS50294	WD_REPEATS_REGION	coord: 71..294 score: 12
IPR017986	WD40-repeat-containing domain	unknown	SSF50978	WD40 repeat-like	coord: 38..287 score: 2.11
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 140..154 score: -coord: 272..286 scor
None	No IPR available	PANTHER	PTHR19919	WD REPEAT CONTAINING PROTEIN	coord: 2..300 score: 3.2E