CU094117 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU094117
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr4 : 4596833 .. 4597089 (-)
Sequence length265
The following sequences are available for this feature:

transcribed_cluster sequence

CGGCCGGGGAGTGTTCATTCCTTCCCTCGCATCAATCTCCCTTTGCACATTATTTTCATTTCAGGCTTTTCTTCCTTCCTTCTAGGGTTTGAACAATCCGGTCGACTACTGCTCTTCTCTGTCATGTTTCCTTTGAGTTCTGTCCGATTCAAATCAGGATTTCTATAACCACCACCGCCGATTTTCCCCTTCAACCATTTGTCTGCTTGGAATCCGAAAATCCCCATTTCTTGTTTCTTCAAAATTTCCCTTCTGCATCATCATT
BLAST of CU094117 vs. TrEMBL
Match: A0A0A0KX61_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G055340 PE=4 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 1.1e-28
Identity = 62/66 (93.94%), Postives = 63/66 (95.45%), Query Frame = -3

Query: 18  GFQADKWLKGKIGGGGYRNPDLNRTELKGNMTEKSSSRPDCSNPRRKEEKPEMKIMCKGR 77
           G +  KWLKGKIGGGGYRNPDLNRTELKGNMTEKSSSRPDCSNPRRKEEKPEMKIMCKGR
Sbjct: 29  GLKDYKWLKGKIGGGGYRNPDLNRTELKGNMTEKSSSRPDCSNPRRKEEKPEMKIMCKGR 88

Query: 78  LMRGKE 137
           LMRGKE
Sbjct: 89  LMRGKE 94

Query: 138 197
           
Sbjct: 149 94

Query: 198 216
           
Sbjct: 209 94

BLAST of CU094117 vs. NCBI nr
Match: gi|700198281|gb|KGN53439.1| (hypothetical protein Csa_4G055340 [Cucumis sativus])

HSP 1 Score: 129.0 bits (323), Expect = 3.9e-27
Identity = 62/66 (93.94%), Postives = 63/66 (95.45%), Query Frame = -3

Query: 18  GFQADKWLKGKIGGGGYRNPDLNRTELKGNMTEKSSSRPDCSNPRRKEEKPEMKIMCKGR 77
           G +  KWLKGKIGGGGYRNPDLNRTELKGNMTEKSSSRPDCSNPRRKEEKPEMKIMCKGR
Sbjct: 29  GLKDYKWLKGKIGGGGYRNPDLNRTELKGNMTEKSSSRPDCSNPRRKEEKPEMKIMCKGR 88

Query: 78  LMRGKE 137
           LMRGKE
Sbjct: 89  LMRGKE 94

Query: 138 197
           
Sbjct: 149 94

Query: 198 216
           
Sbjct: 209 94

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0KX61_CUCSA1.1e-2893.94Uncharacterized protein OS=Cucumis sativus GN=Csa_4G055340 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700198281|gb|KGN53439.1|3.9e-2793.94hypothetical protein Csa_4G055340 [Cucumis sativus][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa4G055340Csa4G055340gene
Csa4G055330Csa4G055330gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
FKNP3UI02LD431FKNP3UI02LD431EST
FKNP3UI02OGH6VFKNP3UI02OGH6VEST
G0093560G0093560EST
G0111036G0111036EST
H0107017H0107017EST
H0176217H0176217EST