CU094062 (transcribed_cluster) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CU094062
Type	transcribed_cluster
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Protein of unknown function (DUF789)
Location	Chr6 : 9119258 .. 9120088 (-)
Sequence length	353

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

TGCACCTCAGCGACAGATTGGGGTACCTTTACTTTCAATATTTCGAGAGATCAACTCCATATGGAAGAGTTCCATTAATGGATAAGATCAATGGATTAGCTCGAAGATACCCTGGGTTGATGACATTGAGAAGCGTTGATCTTTCTCCAGCTAGTTGGATGGCTGTTTCGTGGTACCCAATATACCACATTCCAATGGGGAGAACAATAAAGGATTTATCAACATGCTTCTTGAGTTACCATACACTATCATCATCATTTCAAGATATGGATGTGGAGGATGAATTTGAAAGTGGAGAAAAGAAGAGAAAAGAAAGGGAAGGGATATCGCTGGCAGCATTTGGTTTAGCCACA

Library


Library category	ESTs
fruit (8DPP) library	1
gynoecious flower library	1
hermaphrodite flower library	1

Homology

[Close]

BLAST of CU094062 vs. TrEMBL
Match: A0A0A0KG73_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G128660 PE=4 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 2.7e-54
Identity = 107/117 (91.45%), Postives = 107/117 (91.45%), Query Frame = 3


Query: 3   HLSDRLGYLYFQYFERSTPYGRVPLMDKINGLARRYPGLMTLRSVDLSPASWMAVSWYPI 62
           HLSDRLGYLYFQYFERSTPYGRVPLMDKINGLARRYPGLMTLRSVDLSPASWMAVSWYPI
Sbjct: 150 HLSDRLGYLYFQYFERSTPYGRVPLMDKINGLARRYPGLMTLRSVDLSPASWMAVSWYPI 209

Query: 63  YHIPMGRTIKDLSTCFLSYHTLSSSFQDMDVEDEFESXXXXXXXXXXISLAAFGLAT 122
           YHIPMGRTIKDLSTCFLSYHTLSSSFQDMDVEDEFES          ISLAAFGLAT
Sbjct: 210 YHIPMGRTIKDLSTCFLSYHTLSSSFQDMDVEDEFESGEKKRKEGEGISLAAFGLAT 266

Query: 123  182
           
Sbjct: 270  266

Query: 183  242
           
Sbjct: 330  266

Query: 243  302
           
Sbjct: 390  266

Query: 303  354
           
Sbjct: 450  266

[Close]

BLAST of CU094062 vs. TrEMBL
Match: A0A067E0V7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g021243mg PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 1.7e-48
Identity = 94/117 (80.34%), Postives = 103/117 (88.03%), Query Frame = 3


Query: 3   HLSDRLGYLYFQYFERSTPYGRVPLMDKINGLARRYPGLMTLRSVDLSPASWMAVSWYPI 62
           HL+DRLGYLYFQYFERSTPYGRVPLMDKI GLARRYPGLM+LR+VDLSPASWMAV+WYPI
Sbjct: 141 HLNDRLGYLYFQYFERSTPYGRVPLMDKITGLARRYPGLMSLRNVDLSPASWMAVAWYPI 200

Query: 63  YHIPMGRTIKDLSTCFLSYHTLSSSFQDMDVEDEFESXXXXXXXXXXISLAAFGLAT 122
           YHIPMGRTIKDLSTCFL+YHTLSSSFQDMD++D+ E+          ISL  FGLAT
Sbjct: 201 YHIPMGRTIKDLSTCFLTYHTLSSSFQDMDLDDDIENDERKRKEGEGISLPPFGLAT 257

Query: 123  182
           
Sbjct: 261  257

Query: 183  242
           
Sbjct: 321  257

Query: 243  302
           
Sbjct: 381  257

Query: 303  354
           
Sbjct: 441  257

[Close]

BLAST of CU094062 vs. TrEMBL
Match: A0A067E4Q3_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g021243mg PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 1.7e-48
Identity = 94/117 (80.34%), Postives = 103/117 (88.03%), Query Frame = 3


Query: 3   HLSDRLGYLYFQYFERSTPYGRVPLMDKINGLARRYPGLMTLRSVDLSPASWMAVSWYPI 62
           HL+DRLGYLYFQYFERSTPYGRVPLMDKI GLARRYPGLM+LR+VDLSPASWMAV+WYPI
Sbjct: 149 HLNDRLGYLYFQYFERSTPYGRVPLMDKITGLARRYPGLMSLRNVDLSPASWMAVAWYPI 208

Query: 63  YHIPMGRTIKDLSTCFLSYHTLSSSFQDMDVEDEFESXXXXXXXXXXISLAAFGLAT 122
           YHIPMGRTIKDLSTCFL+YHTLSSSFQDMD++D+ E+          ISL  FGLAT
Sbjct: 209 YHIPMGRTIKDLSTCFLTYHTLSSSFQDMDLDDDIENDERKRKEGEGISLPPFGLAT 265

Query: 123  182
           
Sbjct: 269  265

Query: 183  242
           
Sbjct: 329  265

Query: 243  302
           
Sbjct: 389  265

Query: 303  354
           
Sbjct: 449  265

[Close]

BLAST of CU094062 vs. TrEMBL
Match: V4TJE8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10015991mg PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 1.7e-48
Identity = 94/117 (80.34%), Postives = 103/117 (88.03%), Query Frame = 3


Query: 3   HLSDRLGYLYFQYFERSTPYGRVPLMDKINGLARRYPGLMTLRSVDLSPASWMAVSWYPI 62
           HL+DRLGYLYFQYFERSTPYGRVPLMDKI GLARRYPGLM+LR+VDLSPASWMAV+WYPI
Sbjct: 149 HLNDRLGYLYFQYFERSTPYGRVPLMDKITGLARRYPGLMSLRNVDLSPASWMAVAWYPI 208

Query: 63  YHIPMGRTIKDLSTCFLSYHTLSSSFQDMDVEDEFESXXXXXXXXXXISLAAFGLAT 122
           YHIPMGRTIKDLSTCFL+YHTLSSSFQDMD++D+ E+          ISL  FGLAT
Sbjct: 209 YHIPMGRTIKDLSTCFLTYHTLSSSFQDMDLDDDIENDERKRKEGEGISLPPFGLAT 265

Query: 123  182
           
Sbjct: 269  265

Query: 183  242
           
Sbjct: 329  265

Query: 243  302
           
Sbjct: 389  265

Query: 303  354
           
Sbjct: 449  265

[Close]

BLAST of CU094062 vs. TrEMBL
Match: A0A0D2NG02_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G204000 PE=4 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 2.9e-48
Identity = 94/117 (80.34%), Postives = 103/117 (88.03%), Query Frame = 3


Query: 3   HLSDRLGYLYFQYFERSTPYGRVPLMDKINGLARRYPGLMTLRSVDLSPASWMAVSWYPI 62
           H+++RLGYLYFQYFERSTPYGRVPLMDKINGL+RRYPGLM+LRSVDLSPASWMAV WYPI
Sbjct: 150 HVNNRLGYLYFQYFERSTPYGRVPLMDKINGLSRRYPGLMSLRSVDLSPASWMAVYWYPI 209

Query: 63  YHIPMGRTIKDLSTCFLSYHTLSSSFQDMDVEDEFESXXXXXXXXXXISLAAFGLAT 122
           YHIPMGRTIKDLSTCFL+YHTLSSSFQDMD+ED+ E+          ISL  FGLAT
Sbjct: 210 YHIPMGRTIKDLSTCFLTYHTLSSSFQDMDLEDDIENPERKRKEGEGISLPPFGLAT 266

Query: 123  182
           
Sbjct: 270  266

Query: 183  242
           
Sbjct: 330  266

Query: 243  302
           
Sbjct: 390  266

Query: 303  354
           
Sbjct: 450  266

[Close]

BLAST of CU094062 vs. NCBI nr
Match: gi|449444342|ref|XP_004139934.1| (PREDICTED: uncharacterized protein LOC101222318 [Cucumis sativus])

HSP 1 Score: 220.7 bits (561), Expect = 1.3e-54
Identity = 107/117 (91.45%), Postives = 107/117 (91.45%), Query Frame = 3


Query: 3   HLSDRLGYLYFQYFERSTPYGRVPLMDKINGLARRYPGLMTLRSVDLSPASWMAVSWYPI 62
           HLSDRLGYLYFQYFERSTPYGRVPLMDKINGLARRYPGLMTLRSVDLSPASWMAVSWYPI
Sbjct: 150 HLSDRLGYLYFQYFERSTPYGRVPLMDKINGLARRYPGLMTLRSVDLSPASWMAVSWYPI 209

Query: 63  YHIPMGRTIKDLSTCFLSYHTLSSSFQDMDVEDEFESXXXXXXXXXXISLAAFGLAT 122
           YHIPMGRTIKDLSTCFLSYHTLSSSFQDMDVEDEFES          ISLAAFGLAT
Sbjct: 210 YHIPMGRTIKDLSTCFLSYHTLSSSFQDMDVEDEFESGEKKRKEGEGISLAAFGLAT 266

Query: 123  182
           
Sbjct: 270  266

Query: 183  242
           
Sbjct: 330  266

Query: 243  302
           
Sbjct: 390  266

Query: 303  354
           
Sbjct: 450  266

[Close]

BLAST of CU094062 vs. NCBI nr
Match: gi|659094859|ref|XP_008448279.1| (PREDICTED: uncharacterized protein LOC103490514 [Cucumis melo])

HSP 1 Score: 218.8 bits (556), Expect = 5.1e-54
Identity = 106/117 (90.60%), Postives = 107/117 (91.45%), Query Frame = 3


Query: 3   HLSDRLGYLYFQYFERSTPYGRVPLMDKINGLARRYPGLMTLRSVDLSPASWMAVSWYPI 62
           HLSDRLGYLYFQYFERSTPYGRVPLMDKI+GLARRYPGLMTLRSVDLSPASWMAVSWYPI
Sbjct: 150 HLSDRLGYLYFQYFERSTPYGRVPLMDKISGLARRYPGLMTLRSVDLSPASWMAVSWYPI 209

Query: 63  YHIPMGRTIKDLSTCFLSYHTLSSSFQDMDVEDEFESXXXXXXXXXXISLAAFGLAT 122
           YHIPMGRTIKDLSTCFLSYHTLSSSFQDMDVEDEFES          ISLAAFGLAT
Sbjct: 210 YHIPMGRTIKDLSTCFLSYHTLSSSFQDMDVEDEFESGEKKRKEGEGISLAAFGLAT 266

Query: 123  182
           
Sbjct: 270  266

Query: 183  242
           
Sbjct: 330  266

Query: 243  302
           
Sbjct: 390  266

Query: 303  354
           
Sbjct: 450  266

[Close]

BLAST of CU094062 vs. NCBI nr
Match: gi|568877216|ref|XP_006491641.1| (PREDICTED: uncharacterized protein LOC102615970 isoform X2 [Citrus sinensis])

HSP 1 Score: 201.4 bits (511), Expect = 8.4e-49
Identity = 94/117 (80.34%), Postives = 103/117 (88.03%), Query Frame = 3


Query: 3   HLSDRLGYLYFQYFERSTPYGRVPLMDKINGLARRYPGLMTLRSVDLSPASWMAVSWYPI 62
           HL+DRLGYLYFQYFERSTPYGRVPLMDKI GLARRYPGLM+LR+VDLSPASWMAV+WYPI
Sbjct: 141 HLNDRLGYLYFQYFERSTPYGRVPLMDKITGLARRYPGLMSLRNVDLSPASWMAVAWYPI 200

Query: 63  YHIPMGRTIKDLSTCFLSYHTLSSSFQDMDVEDEFESXXXXXXXXXXISLAAFGLAT 122
           YHIPMGRTIKDLSTCFL+YHTLSSSFQDMD++D+ E+          ISL  FGLAT
Sbjct: 201 YHIPMGRTIKDLSTCFLTYHTLSSSFQDMDLDDDIENDERKRKEGEGISLPPFGLAT 257

Query: 123  182
           
Sbjct: 261  257

Query: 183  242
           
Sbjct: 321  257

Query: 243  302
           
Sbjct: 381  257

Query: 303  354
           
Sbjct: 441  257

[Close]

BLAST of CU094062 vs. NCBI nr
Match: gi|567910039|ref|XP_006447333.1| (hypothetical protein CICLE_v10015991mg [Citrus clementina])

HSP 1 Score: 201.4 bits (511), Expect = 8.4e-49
Identity = 94/117 (80.34%), Postives = 103/117 (88.03%), Query Frame = 3


Query: 3   HLSDRLGYLYFQYFERSTPYGRVPLMDKINGLARRYPGLMTLRSVDLSPASWMAVSWYPI 62
           HL+DRLGYLYFQYFERSTPYGRVPLMDKI GLARRYPGLM+LR+VDLSPASWMAV+WYPI
Sbjct: 149 HLNDRLGYLYFQYFERSTPYGRVPLMDKITGLARRYPGLMSLRNVDLSPASWMAVAWYPI 208

Query: 63  YHIPMGRTIKDLSTCFLSYHTLSSSFQDMDVEDEFESXXXXXXXXXXISLAAFGLAT 122
           YHIPMGRTIKDLSTCFL+YHTLSSSFQDMD++D+ E+          ISL  FGLAT
Sbjct: 209 YHIPMGRTIKDLSTCFLTYHTLSSSFQDMDLDDDIENDERKRKEGEGISLPPFGLAT 265

Query: 123  182
           
Sbjct: 269  265

Query: 183  242
           
Sbjct: 329  265

Query: 243  302
           
Sbjct: 389  265

Query: 303  354
           
Sbjct: 449  265

[Close]

BLAST of CU094062 vs. NCBI nr
Match: gi|823159786|ref|XP_012479727.1| (PREDICTED: uncharacterized protein LOC105794892 [Gossypium raimondii])

HSP 1 Score: 200.7 bits (509), Expect = 1.4e-48
Identity = 94/117 (80.34%), Postives = 103/117 (88.03%), Query Frame = 3


Query: 3   HLSDRLGYLYFQYFERSTPYGRVPLMDKINGLARRYPGLMTLRSVDLSPASWMAVSWYPI 62
           H+++RLGYLYFQYFERSTPYGRVPLMDKINGL+RRYPGLM+LRSVDLSPASWMAV WYPI
Sbjct: 150 HVNNRLGYLYFQYFERSTPYGRVPLMDKINGLSRRYPGLMSLRSVDLSPASWMAVYWYPI 209

Query: 63  YHIPMGRTIKDLSTCFLSYHTLSSSFQDMDVEDEFESXXXXXXXXXXISLAAFGLAT 122
           YHIPMGRTIKDLSTCFL+YHTLSSSFQDMD+ED+ E+          ISL  FGLAT
Sbjct: 210 YHIPMGRTIKDLSTCFLTYHTLSSSFQDMDLEDDIENPERKRKEGEGISLPPFGLAT 266

Query: 123  182
           
Sbjct: 270  266

Query: 183  242
           
Sbjct: 330  266

Query: 243  302
           
Sbjct: 390  266

Query: 303  354
           
Sbjct: 450  266

The following BLAST results are available for this feature:

BLAST of CU094062 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KG73_CUCSA	2.7e-54	91.45	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G128660 PE=4 SV=1	[more]
A0A067E0V7_CITSI	1.7e-48	80.34	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g021243mg PE=4 SV=1	[more]
A0A067E4Q3_CITSI	1.7e-48	80.34	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g021243mg PE=4 SV=1	[more]
V4TJE8_9ROSI	1.7e-48	80.34	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10015991mg PE=4 SV=1	[more]
A0A0D2NG02_GOSRA	2.9e-48	80.34	Uncharacterized protein OS=Gossypium raimondii GN=B456_005G204000 PE=4 SV=1	[more]

BLAST of CU094062 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449444342\|ref\|XP_004139934.1\|	1.3e-54	91.45	PREDICTED: uncharacterized protein LOC101222318 [Cucumis sativus]	[more]
gi\|659094859\|ref\|XP_008448279.1\|	5.1e-54	90.60	PREDICTED: uncharacterized protein LOC103490514 [Cucumis melo]	[more]
gi\|568877216\|ref\|XP_006491641.1\|	8.4e-49	80.34	PREDICTED: uncharacterized protein LOC102615970 isoform X2 [Citrus sinensis]	[more]
gi\|567910039\|ref\|XP_006447333.1\|	8.4e-49	80.34	hypothetical protein CICLE_v10015991mg [Citrus clementina]	[more]
gi\|823159786\|ref\|XP_012479727.1\|	1.4e-48	80.34	PREDICTED: uncharacterized protein LOC105794892 [Gossypium raimondii]	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition
IPR008507	DUF789

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
Csa6G128660	Csa6G128660	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
FKNP3UI02N353M	FKNP3UI02N353M	EST
G0015721	G0015721	EST
H0190314	H0190314	EST

InterPro

Analysis Name: InterPro Annotations of cucumber unigene v3
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008507	Protein of unknown function DUF789	PFAM	PF05623	DUF789	coord: 4..118 score: 3.0
None	No IPR available	PANTHER	PTHR31343	FAMILY NOT NAMED	coord: 2..118 score: 9.7