CU093708 (transcribed_cluster) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
CAATCCTCTCAGCTCCTGCATATGCCATGAACGATGAATTTTCAAGGGTTCTAAGCCAACAGATGGACCATTTTTCAAATGATCCAAATGCAGATAGGCTAAACCGCTTAAAAGGTGAAATGAGTCAGGTGAGGAATGTGATGATGGATAATATAGAGAAAGTGTTGGAAAGAGGTGACCGGTTGACTTTGCTGGTGGAAGAAAACCACAAACATTCAAGGAAATGCAGTTCGATTTAGAAGGCAATCACGACGCTACAGAAACACCTTGTGGTGGAAAAACTTTAAACTCACATGTTCATTGATGCTCATTTTCCCGATCGTCCTTTACATCATGCTAGCATTCTTCTGCAAAGGACCGCTACTGCCGTCTTGCTTTGAATTTAGAATAGAGTGCAGAAGATGCTGCTAAGTGATCTTTTATCACTTTGTTCAAGAACATGTA
BLAST of CU093708 vs. Swiss-Prot
Match: VA713_ARATH (Vesicle-associated membrane protein 713 OS=Arabidopsis thaliana GN=VAMP713 PE=2 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 4.9e-22 Identity = 50/67 (74.63%), Postives = 61/67 (91.04%), Query Frame = 3
HSP 2 Score: 79.7 bits (195), Expect = 2.9e-14 Identity = 33/57 (57.89%), Postives = 42/57 (73.68%), Query Frame = 1
BLAST of CU093708 vs. Swiss-Prot
Match: VA711_ARATH (Vesicle-associated membrane protein 711 OS=Arabidopsis thaliana GN=VAMP711 PE=1 SV=2) HSP 1 Score: 102.4 bits (254), Expect = 4.2e-21 Identity = 47/65 (72.31%), Postives = 60/65 (92.31%), Query Frame = 3
HSP 2 Score: 77.0 bits (188), Expect = 1.9e-13 Identity = 31/57 (54.39%), Postives = 42/57 (73.68%), Query Frame = 1
BLAST of CU093708 vs. Swiss-Prot
Match: VA712_ARATH (Vesicle-associated membrane protein 712 OS=Arabidopsis thaliana GN=VAMP712 PE=2 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 1.3e-19 Identity = 44/67 (65.67%), Postives = 60/67 (89.55%), Query Frame = 3
HSP 2 Score: 77.8 bits (190), Expect = 1.1e-13 Identity = 32/57 (56.14%), Postives = 42/57 (73.68%), Query Frame = 1
BLAST of CU093708 vs. Swiss-Prot
Match: VA714_ARATH (Vesicle-associated membrane protein 714 OS=Arabidopsis thaliana GN=VAMP714 PE=1 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 3.9e-19 Identity = 42/65 (64.62%), Postives = 58/65 (89.23%), Query Frame = 3
HSP 2 Score: 54.7 bits (130), Expect = 1.0e-06 Identity = 26/57 (45.61%), Postives = 33/57 (57.89%), Query Frame = 1
BLAST of CU093708 vs. Swiss-Prot
Match: VAMP7_RAT (Vesicle-associated membrane protein 7 OS=Rattus norvegicus GN=Vamp7 PE=1 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 9.1e-08 Identity = 25/65 (38.46%), Postives = 43/65 (66.15%), Query Frame = 3
BLAST of CU093708 vs. TrEMBL
Match: A0A0A0LWB2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G226450 PE=3 SV=1) HSP 1 Score: 132.5 bits (332), Expect = 4.2e-28 Identity = 66/67 (98.51%), Postives = 67/67 (100.00%), Query Frame = 3
BLAST of CU093708 vs. TrEMBL
Match: A0A0A0LWB2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G226450 PE=3 SV=1) HSP 1 Score: 123.2 bits (308), Expect = 2.6e-25 Identity = 57/58 (98.28%), Postives = 58/58 (100.00%), Query Frame = 1
HSP 2 Score: 121.3 bits (303), Expect = 9.7e-25 Identity = 61/67 (91.04%), Postives = 64/67 (95.52%), Query Frame = 3
BLAST of CU093708 vs. TrEMBL
Match: A0A061GNW2_THECC (Vesicle-associated membrane protein 713 isoform 1 OS=Theobroma cacao GN=TCM_038153 PE=3 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 3.4e-09 Identity = 29/59 (49.15%), Postives = 45/59 (76.27%), Query Frame = 1
HSP 2 Score: 118.6 bits (296), Expect = 6.3e-24 Identity = 61/84 (72.62%), Postives = 69/84 (82.14%), Query Frame = 3
BLAST of CU093708 vs. TrEMBL
Match: A0A0S3R6L9_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G428900 PE=3 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 3.6e-11 Identity = 30/56 (53.57%), Postives = 45/56 (80.36%), Query Frame = 1
HSP 2 Score: 118.2 bits (295), Expect = 8.2e-24 Identity = 58/62 (93.55%), Postives = 61/62 (98.39%), Query Frame = 3
BLAST of CU093708 vs. TrEMBL
Match: A0A061GPX7_THECC (Vesicle-associated membrane protein 713 isoform 2 OS=Theobroma cacao GN=TCM_038153 PE=3 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 3.4e-09 Identity = 29/59 (49.15%), Postives = 45/59 (76.27%), Query Frame = 1
HSP 2 Score: 117.5 bits (293), Expect = 1.4e-23 Identity = 57/67 (85.07%), Postives = 64/67 (95.52%), Query Frame = 3
BLAST of CU093708 vs. NCBI nr
Match: gi|449465627|ref|XP_004150529.1| (PREDICTED: vesicle-associated membrane protein 713-like [Cucumis sativus]) HSP 1 Score: 130.6 bits (327), Expect = 2.3e-27 Identity = 66/67 (98.51%), Postives = 67/67 (100.00%), Query Frame = 3
BLAST of CU093708 vs. NCBI nr
Match: gi|659086456|ref|XP_008443943.1| (PREDICTED: vesicle-associated membrane protein 711-like [Cucumis melo]) HSP 1 Score: 128.6 bits (322), Expect = 8.7e-27 Identity = 65/67 (97.01%), Postives = 66/67 (98.51%), Query Frame = 3
BLAST of CU093708 vs. NCBI nr
Match: gi|1009110165|ref|XP_015894071.1| (PREDICTED: vesicle-associated membrane protein 713-like [Ziziphus jujuba]) HSP 1 Score: 119.8 bits (299), Expect = 4.0e-24 Identity = 57/67 (85.07%), Postives = 66/67 (98.51%), Query Frame = 3
BLAST of CU093708 vs. NCBI nr
Match: gi|590578588|ref|XP_007013552.1| (Vesicle-associated membrane protein 713 isoform 1 [Theobroma cacao]) HSP 1 Score: 119.4 bits (298), Expect = 5.3e-24 Identity = 61/67 (91.04%), Postives = 64/67 (95.52%), Query Frame = 3
BLAST of CU093708 vs. NCBI nr
Match: gi|951005436|ref|XP_014508147.1| (PREDICTED: vesicle-associated membrane protein 711-like [Vigna radiata var. radiata]) HSP 1 Score: 116.3 bits (290), Expect = 4.5e-23 Identity = 61/84 (72.62%), Postives = 69/84 (82.14%), Query Frame = 3
The following BLAST results are available for this feature:
The following terms have been associated with this transcribed_cluster:
GO Assignments
This transcribed_cluster is annotated with the following GO terms.
This transcribed_cluster is associated with the following gene feature(s):
The following EST feature(s) are a part of this transcribed_cluster:
Analysis Name: InterPro Annotations of cucumber unigene v3
Date Performed: 2016-11-16
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