CU093388 (transcribed_cluster) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CU093388
Type	transcribed_cluster
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	DNA polymerase
Location	Chr7 : 5372061 .. 5372703 (-)
Sequence length	647

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

CTTTTAAAGAAAAATCAGGTACTTTAATCTTTCCTTACTTGGTTAAGTTCATAGGAGTTTATTACAGCGAGGAATTCAAAGTTCGCACGTACACTTGGGTACGAGATAATCCCACTGAGGGGTTATTTCTTTTGAGAAGAAGAAGAGTCCTTTCGAGGGTGTAATCAACGACCTCCACAGTAGCCGACTAGAAGCTAAGAAAAGGGCTGATGCTCCCATGTCATGGATTTACAAAATCCTAATTCATTCTCTATACGGCAGATTAGGTATCAATCCGGAAAGTATTATCACTGAAATATGCAATCAAAAGCAGTACGAAGTACTTTATAATAAGGATACTTGAATATCAGCGGAAAAGCTCACTGACTATTACTATACTGTCAAGTACTCCGTTAATAGTAACATAGTGGACGACCTCGAGTGGAAAGCACCCCGGATGTCCGCTGTTCATATAGCTGCTGCTATAAGAGCTTGTGCTCGGATATACATTATCCCTACATTTCCCGACCTGACTGCTACTATACGGATACTGATTCTATCATTCTAGGAAGTCCTCTTCCGGAGGATTTAATCTCTACCACTGAACTGGGTAAGTTTCAACTTGAAAACCGTGTGAAGAAAGGGCACCTAAAAGTTATACTTTAACA

Library


Library category	ESTs
gynoecious flower library	3
hermaphrodite flower library	2

Homology

[Close]

BLAST of CU093388 vs. Swiss-Prot
Match: DPOM_MAIZE (DNA polymerase OS=Zea mays PE=3 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 8.3e-10
Identity = 39/108 (36.11%), Postives = 60/108 (55.56%), Query Frame = 2


Query: 131 FEKKKSPFEGVINDLHSSRLEAKKRADAPMSWIYKILIHSLYGRLGINPESIITEICNQK 190
           F++K+SPF+  + D++S RL+AK + +  + +IYKI ++SLYGR GI+PES  T+I + +
Sbjct: 595 FDRKESPFKRFVYDIYSKRLDAKAKGEKALDFIYKITMNSLYGRFGISPESTTTQIVSTE 654

Query: 191 QYE--VLYNKDT*ISAEKLTDYYYTVKYSVNSNIVDDLEWKAPRMSAV 250
           +     LYN     S E  +D       +V S  +  L    P  +AV
Sbjct: 655 ESRKLALYNDGFVQSYELSSDKCLVTCKNVRSLDLLKLSSDRPTYAAV 702

Query: 251  310
           
Sbjct: 715  702

Query: 311  370
           
Sbjct: 775  702

Query: 371  430
           
Sbjct: 835  702

Query: 431  449
           
Sbjct: 895  702

HSP 2 Score: 57.8 bits (138), Expect = 1.7e-07
Identity = 25/45 (55.56%), Postives = 33/45 (73.33%), Query Frame = 1


Query: 490 YPYISRPDCYYTDTDSIILGSPLPEDLISTTELGKFQLENRVKKG 549
           +P+ISR DCYYTDTDS+++   LPE+ +S T LGKF+ E+ V+ G
Sbjct: 717 HPFISRDDCYYTDTDSVVVERELPEEEVSPTALGKFKHEHFVEYG 761

Query: 550  609
           
Sbjct: 777  761

Query: 610  625
           
Sbjct: 837  761

HSP 3 Score: 29.3 bits (64), Expect = 6.6e+01
Identity = 11/26 (42.31%), Postives = 16/26 (61.54%), Query Frame = 1


Query: 79  KFARTLGYEIIPLRGYFF*EEEESFR 138
           K+A +LGY++ P+ GY F  +E  F+
Sbjct: 578 KYAVSLGYKVYPICGYIFDRKESPFK 603

Query: 139  157
           
Sbjct: 638  603

[Close]

BLAST of CU093388 vs. TrEMBL
Match: S8EK46_9LAMI (DNA polymerase (Fragment) OS=Genlisea aurea GN=M569_01793 PE=3 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 2.1e-28
Identity = 65/107 (60.75%), Postives = 81/107 (75.70%), Query Frame = 2


Query: 131 FEKKKSPFEGVINDLHSSRLEAKKRADAPMSWIYKILIHSLYGRLGINPESIITEICNQK 190
           FEKK SPF G I+DL+ SRL+AKKR D PM++IYKIL++SLYGR GINPES++TEICN+K
Sbjct: 361 FEKKPSPFSGFISDLYESRLDAKKRGDEPMTFIYKILMNSLYGRFGINPESLVTEICNKK 420

Query: 191 QYEVLYNKDT*ISAEKLTDYYYTVKYSVNSNIVDDLEWKAPRMSAVH 250
           + +    K+   SAE L + YY V Y  N   +DD EWKAP+MSAVH
Sbjct: 421 ERDEYLKKENFQSAEMLNENYYIVNYVTNC-FIDDEEWKAPKMSAVH 466

Query: 251  310
           
Sbjct: 481  466

Query: 311  370
           
Sbjct: 541  466

Query: 371  430
           
Sbjct: 601  466

Query: 431  452
           
Sbjct: 661  466

[Close]

BLAST of CU093388 vs. TrEMBL
Match: S8EK46_9LAMI (DNA polymerase (Fragment) OS=Genlisea aurea GN=M569_01793 PE=3 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 7.6e-10
Identity = 33/45 (73.33%), Postives = 39/45 (86.67%), Query Frame = 1


Query: 490 YPYISRPDCYYTDTDSIILGSPLPEDLISTTELGKFQLENRVKKG 549
           YPYI R DCYYTDTDS+ILG+PL  + IS+TELGK++LEN VKKG
Sbjct: 480 YPYICREDCYYTDTDSVILGNPLLANDISSTELGKWKLENNVKKG 524

Query: 550  609
           
Sbjct: 540  524

Query: 610  625
           
Sbjct: 600  524

HSP 2 Score: 37.0 bits (84), Expect = 3.5e+01
Identity = 15/27 (55.56%), Postives = 20/27 (74.07%), Query Frame = 1


Query: 79  KFARTLGYEIIPLRGYFF*EEEESFRG 138
           K+AR LGY+I+PLRGY F ++   F G
Sbjct: 344 KYARNLGYQILPLRGYLFEKKPSPFSG 370

Query: 139  160
           
Sbjct: 404  370

HSP 3 Score: 35.8 bits (81), Expect = 7.8e+01
Identity = 17/26 (65.38%), Postives = 20/26 (76.92%), Query Frame = 3


Query: 3   FKEKSGTLIFPYLVKFIGVYYSEEFK 62
           +K K GTLIFP   +F+GVYYSEE K
Sbjct: 320 YKNKDGTLIFP-TGQFLGVYYSEELK 344

Query: 63   81
           
Sbjct: 380  344

HSP 4 Score: 125.2 bits (313), Expect = 9.8e-26
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 2


Query: 131 FEKKKSPFEGVINDLHSSRLEAKKRADAPMSWIYKILIHSLYGRLGINPESIITEICNQK 190
           FEKKKSPFEGVINDLHSSRLEAKKRADAPMSWIYKILIHSLYGRLGINPESIITEICNQK
Sbjct: 216 FEKKKSPFEGVINDLHSSRLEAKKRADAPMSWIYKILIHSLYGRLGINPESIITEICNQK 275

Query: 191  250
           
Sbjct: 276  275

Query: 251  310
           
Sbjct: 336  275

[Close]

BLAST of CU093388 vs. TrEMBL
Match: A0A0A0K3F4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G081710 PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 4.4e-18
Identity = 48/60 (80.00%), Postives = 48/60 (80.00%), Query Frame = 1


Query: 409 GRPRVESTPDVRXXXXXXXXXXXXDIHYPYISRPDCYYTDTDSIILGSPLPEDLISTTEL 468
           GRPRVESTPDVR            DIHYPYISRPDCYYTDTDSIILGSPLPEDLISTTEL
Sbjct: 277 GRPRVESTPDVRCSYSCCYKSLCSDIHYPYISRPDCYYTDTDSIILGSPLPEDLISTTEL 336

Query: 469  528
           
Sbjct: 337  336

Query: 529  588
           
Sbjct: 397  336

HSP 2 Score: 45.8 bits (107), Expect = 7.6e-02
Identity = 26/42 (61.90%), Postives = 26/42 (61.90%), Query Frame = 3


Query: 3   FKEKSGTLIFPYLVKFIGVYYSEEFKVRTYTWVRDNPTEGLF 62
           FKEKSGTLIFP   KFIGVYYSEEFK          P  G F
Sbjct: 175 FKEKSGTLIFP-TGKFIGVYYSEEFKFARTLGYEIIPLRGYF 215

Query: 63   122
           
Sbjct: 235  215

Query: 123  129
           
Sbjct: 295  215

HSP 3 Score: 45.4 bits (106), Expect = 9.9e-02
Identity = 20/27 (74.07%), Postives = 23/27 (85.19%), Query Frame = 1


Query: 79  KFARTLGYEIIPLRGYFF*EEEESFRG 138
           KFARTLGYEIIPLRGYFF +++  F G
Sbjct: 199 KFARTLGYEIIPLRGYFFEKKKSPFEG 225

Query: 139  160
           
Sbjct: 259  225

HSP 4 Score: 107.5 bits (267), Expect = 2.1e-20
Identity = 50/106 (47.17%), Postives = 73/106 (68.87%), Query Frame = 2


Query: 131 FEKKKSPFEGVINDLHSSRLEAKKRADAPMSWIYKILIHSLYGRLGINPESIITEICNQK 190
           FE++ SPF   +++L S R EAK      M+++YKIL++SLYGR GINP+S ITE+ N++
Sbjct: 359 FEERTSPFGSFVSELFSRRQEAKVSGHDAMAYVYKILMNSLYGRFGINPQSTITEVVNRE 418

Query: 191 QYEVLYNKDT*ISAEKLTDYYYTVKYSVNSNIVDDLEWKAPRMSAV 250
           +Y+ L   +  I  +KL+D+YY V Y  N+  VDDL+W  P +SAV
Sbjct: 419 RYDTLTQNENLIFGDKLSDHYYIVSYLSNTGQVDDLDWNPPSISAV 464

Query: 251  310
           
Sbjct: 479  464

Query: 311  370
           
Sbjct: 539  464

Query: 371  430
           
Sbjct: 599  464

Query: 431  449
           
Sbjct: 659  464

[Close]

BLAST of CU093388 vs. TrEMBL
Match: A0A101LW89_PICGL (DNA polymerase OS=Picea glauca GN=dpo PE=3 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.7e-09
Identity = 32/45 (71.11%), Postives = 37/45 (82.22%), Query Frame = 1


Query: 490 YPYISRPDCYYTDTDSIILGSPLPEDLISTTELGKFQLENRVKKG 549
           Y Y SRPDCYYTDTDS +LGSPLPED +S+ ELGK +LE  VK+G
Sbjct: 479 YKYTSRPDCYYTDTDSAVLGSPLPEDEVSSIELGKCKLEYTVKQG 523

Query: 550  609
           
Sbjct: 539  523

Query: 610  625
           
Sbjct: 599  523

HSP 2 Score: 35.4 bits (80), Expect = 1.0e+02
Identity = 16/25 (64.00%), Postives = 17/25 (68.00%), Query Frame = 1


Query: 79  KFARTLGYEIIPLRGYFF*EEEESF 138
           K+AR LGY IIPLRGY F E    F
Sbjct: 342 KYARDLGYTIIPLRGYLFEERTSPF 366

Query: 139  154
           
Sbjct: 402  366

HSP 3 Score: 105.5 bits (262), Expect = 8.1e-20
Identity = 52/106 (49.06%), Postives = 74/106 (69.81%), Query Frame = 2


Query: 131 FEKKKSPFEGVINDLHSSRLEAKKRADAPMSWIYKILIHSLYGRLGINPESIITEICNQK 190
           FE+K+SPF+  ++ L SSRLEA+K  +  +S++YKIL++SLYGR GINP+S  TE+CN K
Sbjct: 59  FERKESPFKDFVSSLFSSRLEARKDGNEALSYVYKILMNSLYGRFGINPKSTTTEVCNSK 118

Query: 191 QYEVLYNKDT*ISAEKLTDYYYTVKYSVNSNIVDDLEWKAPRMSAV 250
           +Y+ L+ KD  I  +KL++  Y V Y VN+   +D  W  P  SAV
Sbjct: 119 RYKHLFKKDEFIYGDKLSEDCYIVSYHVNTGKDEDY-WNPPTNSAV 163

Query: 251  310
           
Sbjct: 179  163

Query: 311  370
           
Sbjct: 239  163

Query: 371  430
           
Sbjct: 299  163

Query: 431  449
           
Sbjct: 359  163

[Close]

BLAST of CU093388 vs. TrEMBL
Match: A0A118HYM3_CYNCS (Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_026218 PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.7e-09
Identity = 30/45 (66.67%), Postives = 39/45 (86.67%), Query Frame = 1


Query: 490 YPYISRPDCYYTDTDSIILGSPLPEDLISTTELGKFQLENRVKKG 549
           YPYISR D YYTDTDS++LG PLPE++IS++ LG F+LE+R+ KG
Sbjct: 178 YPYISREDSYYTDTDSVVLGQPLPEEVISSSVLGMFKLEDRISKG 222

Query: 550  609
           
Sbjct: 238  222

Query: 610  625
           
Sbjct: 298  222

HSP 2 Score: 35.8 bits (81), Expect = 7.8e+01
Identity = 16/26 (61.54%), Postives = 22/26 (84.62%), Query Frame = 3


Query: 3  FKEKSGTLIFPYLVKFIGVYYSEEFK 62
          +++K+GTLIFP   +F+GVYYSEE K
Sbjct: 18 YRDKNGTLIFP-TGEFLGVYYSEELK 42

Query: 63  81
          
Sbjct: 78  42

HSP 3 Score: 102.8 bits (255), Expect = 5.2e-19
Identity = 52/106 (49.06%), Postives = 73/106 (68.87%), Query Frame = 2


Query: 131 FEKKKSPFEGVINDLHSSRLEAKKRADAPMSWIYKILIHSLYGRLGINPESIITEICNQK 190
           FEKK+SPF G + DL SSRL+AKK  +  +S++YKIL++SLYGR GINP+S IT+IC+ +
Sbjct: 140 FEKKESPFTGFVTDLFSSRLDAKKSGNEALSYVYKILMNSLYGRFGINPKSTITDICDVE 199

Query: 191 QYEVLYNKDT*ISAEKLTDYYYTVKYSVNSNIVDDLEWKAPRMSAV 250
           +Y+ L  K   I ++KL+D  Y V Y  N+   +   W  P+ SAV
Sbjct: 200 RYKQLIRKKDFIFSDKLSDNKYIVSYHTNT---ETDYWNPPKNSAV 242

Query: 251  310
           
Sbjct: 260  242

Query: 311  370
           
Sbjct: 320  242

Query: 371  430
           
Sbjct: 380  242

Query: 431  449
           
Sbjct: 440  242

[Close]

BLAST of CU093388 vs. NCBI nr
Match: gi|527207786|gb|EPS72962.1| (hypothetical protein M569_01793, partial [Genlisea aurea])

HSP 1 Score: 136.7 bits (343), Expect = 4.7e-29
Identity = 65/107 (60.75%), Postives = 81/107 (75.70%), Query Frame = 2


Query: 131 FEKKKSPFEGVINDLHSSRLEAKKRADAPMSWIYKILIHSLYGRLGINPESIITEICNQK 190
           FEKK SPF G I+DL+ SRL+AKKR D PM++IYKIL++SLYGR GINPES++TEICN+K
Sbjct: 361 FEKKPSPFSGFISDLYESRLDAKKRGDEPMTFIYKILMNSLYGRFGINPESLVTEICNKK 420

Query: 191 QYEVLYNKDT*ISAEKLTDYYYTVKYSVNSNIVDDLEWKAPRMSAVH 250
           + +    K+   SAE L + YY V Y  N   +DD EWKAP+MSAVH
Sbjct: 421 ERDEYLKKENFQSAEMLNENYYIVNYVTNC-FIDDEEWKAPKMSAVH 466

Query: 251  310
           
Sbjct: 481  466

Query: 311  370
           
Sbjct: 541  466

Query: 371  430
           
Sbjct: 601  466

Query: 431  452
           
Sbjct: 661  466

[Close]

BLAST of CU093388 vs. NCBI nr
Match: gi|700188760|gb|KGN43993.1| (hypothetical protein Csa_7G081710 [Cucumis sativus])

HSP 1 Score: 127.9 bits (320), Expect = 2.2e-26
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 2


Query: 131 FEKKKSPFEGVINDLHSSRLEAKKRADAPMSWIYKILIHSLYGRLGINPESIITEICNQK 190
           FEKKKSPFEGVINDLHSSRLEAKKRADAPMSWIYKILIHSLYGRLGINPESIITEICNQK
Sbjct: 216 FEKKKSPFEGVINDLHSSRLEAKKRADAPMSWIYKILIHSLYGRLGINPESIITEICNQK 275

Query: 191  250
           
Sbjct: 276  275

Query: 251  310
           
Sbjct: 336  275

[Close]

BLAST of CU093388 vs. NCBI nr
Match: gi|973603353|gb|KUM46512.1| (DNA polymerase (mitochondrion) [Picea glauca])

HSP 1 Score: 110.2 bits (274), Expect = 4.7e-21
Identity = 50/106 (47.17%), Postives = 73/106 (68.87%), Query Frame = 2


Query: 131 FEKKKSPFEGVINDLHSSRLEAKKRADAPMSWIYKILIHSLYGRLGINPESIITEICNQK 190
           FE++ SPF   +++L S R EAK      M+++YKIL++SLYGR GINP+S ITE+ N++
Sbjct: 359 FEERTSPFGSFVSELFSRRQEAKVSGHDAMAYVYKILMNSLYGRFGINPQSTITEVVNRE 418

Query: 191 QYEVLYNKDT*ISAEKLTDYYYTVKYSVNSNIVDDLEWKAPRMSAV 250
           +Y+ L   +  I  +KL+D+YY V Y  N+  VDDL+W  P +SAV
Sbjct: 419 RYDTLTQNENLIFGDKLSDHYYIVSYLSNTGQVDDLDWNPPSISAV 464

Query: 251  310
           
Sbjct: 479  464

Query: 311  370
           
Sbjct: 539  464

Query: 371  430
           
Sbjct: 599  464

Query: 431  449
           
Sbjct: 659  464

[Close]

BLAST of CU093388 vs. NCBI nr
Match: gi|976784356|gb|KVG76489.1| (hypothetical protein Ccrd_026218 [Cynara cardunculus var. scolymus])

HSP 1 Score: 108.2 bits (269), Expect = 1.8e-20
Identity = 52/106 (49.06%), Postives = 74/106 (69.81%), Query Frame = 2


Query: 131 FEKKKSPFEGVINDLHSSRLEAKKRADAPMSWIYKILIHSLYGRLGINPESIITEICNQK 190
           FE+K+SPF+  ++ L SSRLEA+K  +  +S++YKIL++SLYGR GINP+S  TE+CN K
Sbjct: 59  FERKESPFKDFVSSLFSSRLEARKDGNEALSYVYKILMNSLYGRFGINPKSTTTEVCNSK 118

Query: 191 QYEVLYNKDT*ISAEKLTDYYYTVKYSVNSNIVDDLEWKAPRMSAV 250
           +Y+ L+ KD  I  +KL++  Y V Y VN+   +D  W  P  SAV
Sbjct: 119 RYKHLFKKDEFIYGDKLSEDCYIVSYHVNTGKDEDY-WNPPTNSAV 163

Query: 251  310
           
Sbjct: 179  163

Query: 311  370
           
Sbjct: 239  163

Query: 371  430
           
Sbjct: 299  163

Query: 431  449
           
Sbjct: 359  163

[Close]

BLAST of CU093388 vs. NCBI nr
Match: gi|976900119|gb|KVH88386.1| (DNA-directed DNA polymerase, family B, mitochondria/virus [Cynara cardunculus var. scolymus])

HSP 1 Score: 105.5 bits (262), Expect = 1.2e-19
Identity = 52/106 (49.06%), Postives = 73/106 (68.87%), Query Frame = 2


Query: 131 FEKKKSPFEGVINDLHSSRLEAKKRADAPMSWIYKILIHSLYGRLGINPESIITEICNQK 190
           FEKK+SPF G + DL SSRL+AKK  +  +S++YKIL++SLYGR GINP+S IT+IC+ +
Sbjct: 140 FEKKESPFTGFVTDLFSSRLDAKKSGNEALSYVYKILMNSLYGRFGINPKSTITDICDVE 199

Query: 191 QYEVLYNKDT*ISAEKLTDYYYTVKYSVNSNIVDDLEWKAPRMSAV 250
           +Y+ L  K   I ++KL+D  Y V Y  N+   +   W  P+ SAV
Sbjct: 200 RYKQLIRKKDFIFSDKLSDNKYIVSYHTNT---ETDYWNPPKNSAV 242

Query: 251  310
           
Sbjct: 260  242

Query: 311  370
           
Sbjct: 320  242

Query: 371  430
           
Sbjct: 380  242

Query: 431  449
           
Sbjct: 440  242

The following BLAST results are available for this feature:

BLAST of CU093388 vs. Swiss-Prot


Match Name	E-value	Identity	Description
DPOM_MAIZE	8.3e-10	36.11	DNA polymerase OS=Zea mays PE=3 SV=1	[more]

BLAST of CU093388 vs. TrEMBL


Match Name	E-value	Identity	Description
S8EK46_9LAMI	2.1e-28	60.75	DNA polymerase (Fragment) OS=Genlisea aurea GN=M569_01793 PE=3 SV=1	[more]
S8EK46_9LAMI	7.6e-10	73.33	DNA polymerase (Fragment) OS=Genlisea aurea GN=M569_01793 PE=3 SV=1	[more]
A0A0A0K3F4_CUCSA	4.4e-18	80.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G081710 PE=4 SV=1	[more]
A0A101LW89_PICGL	1.7e-09	71.11	DNA polymerase OS=Picea glauca GN=dpo PE=3 SV=1	[more]
A0A118HYM3_CYNCS	1.7e-09	66.67	Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_026218 PE=4 ...	[more]

BLAST of CU093388 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|527207786\|gb\|EPS72962.1\|	4.7e-29	60.75	hypothetical protein M569_01793, partial [Genlisea aurea]	[more]
gi\|700188760\|gb\|KGN43993.1\|	2.2e-26	100.00	hypothetical protein Csa_7G081710 [Cucumis sativus]	[more]
gi\|973603353\|gb\|KUM46512.1\|	4.7e-21	47.17	DNA polymerase (mitochondrion) [Picea glauca]	[more]
gi\|976784356\|gb\|KVG76489.1\|	1.8e-20	49.06	hypothetical protein Ccrd_026218 [Cynara cardunculus var. scolymus]	[more]
gi\|976900119\|gb\|KVH88386.1\|	1.2e-19	49.06	DNA-directed DNA polymerase, family B, mitochondria/virus [Cynara cardunculus va...	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition
IPR004868	DNA-dir_DNA_pol_B_mt/vir

Vocabulary: **Molecular Function**
Term	Definition
GO:0000166	nucleotide binding
GO:0003677	DNA binding
GO:0003887	DNA-directed DNA polymerase activity
GO:0008408	3'-5' exonuclease activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006260	DNA replication

GO Annotation

GO Assignments

This transcribed_cluster is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006260	DNA replication
molecular_function	GO:0008408	3'-5' exonuclease activity
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003887	DNA-directed DNA polymerase activity
molecular_function	GO:0000166	nucleotide binding

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
Csa7G081710	Csa7G081710	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
G0002447	G0002447	EST
G0129761	G0129761	EST
G0187858	G0187858	EST
H0008188	H0008188	EST
H0110278	H0110278	EST

InterPro

Analysis Name: InterPro Annotations of cucumber unigene v3
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004868	DNA-directed DNA polymerase, family B, mitochondria/virus	PFAM	PF03175	DNA_pol_B_2	coord: 4..162 score: 8.3
None	No IPR available	unknown	SSF56672	DNA/RNA polymerases	coord: 7..118 score: 7.79E-19coord: 146..170 score: 7.79