CU093340 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU093340
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr6 : 24856152 .. 24856386 (-)
Sequence length243
The following sequences are available for this feature:

transcribed_cluster sequence

GGGTATTAGATGTTGAGGAATGGGAAAGCCAGGACTTGGATTACTGCCCTCCGCCGTATCTTCTGGCGGAAGGACGAGTTAACGACAACGACAAAGCGTCCGATGAACAACCTCCAAGTCTTTCTGAGCCTCCGTCGCGGGCTTGCCGTTCATGTTGATGATATATATATATATATATGCTACCTTTAATTTTACCATACCTGATCATCTCCCTAGTTTTTCTTCTTTACTTTAAATTTAGAT
BLAST of CU093340 vs. TrEMBL
Match: A0A0A0KK23_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G499860 PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 1.6e-21
Identity = 48/50 (96.00%), Postives = 50/50 (100.00%), Query Frame = 3

Query: 6   LDVEEWESQDLDYCPPPYLLAEGRVNDNDKASDEQPPSLSEPPSRACRSC 65
           +DVEEWESQDLDYCPPPYLLAEGRVNDNDKASDEQPPSLSEPPS+ACRSC
Sbjct: 22  IDVEEWESQDLDYCPPPYLLAEGRVNDNDKASDEQPPSLSEPPSQACRSC 71

Query: 66  125
           
Sbjct: 82  71

Query: 126 156
           
Sbjct: 142 71

BLAST of CU093340 vs. NCBI nr
Match: gi|700193538|gb|KGN48742.1| (hypothetical protein Csa_6G499860 [Cucumis sativus])

HSP 1 Score: 108.6 bits (270), Expect = 5.1e-21
Identity = 48/50 (96.00%), Postives = 50/50 (100.00%), Query Frame = 3

Query: 6   LDVEEWESQDLDYCPPPYLLAEGRVNDNDKASDEQPPSLSEPPSRACRSC 65
           +DVEEWESQDLDYCPPPYLLAEGRVNDNDKASDEQPPSLSEPPS+ACRSC
Sbjct: 22  IDVEEWESQDLDYCPPPYLLAEGRVNDNDKASDEQPPSLSEPPSQACRSC 71

Query: 66  125
           
Sbjct: 82  71

Query: 126 156
           
Sbjct: 142 71

BLAST of CU093340 vs. NCBI nr
Match: gi|659080058|ref|XP_008440588.1| (PREDICTED: uncharacterized protein LOC103484965 [Cucumis melo])

HSP 1 Score: 93.6 bits (231), Expect = 1.7e-16
Identity = 44/52 (84.62%), Postives = 48/52 (92.31%), Query Frame = 3

Query: 6   LDVEEWESQDLDYCPPPYLLAEGRVNDN---DKASDEQPPSLSEPPSRACRS 65
           +DVE+WESQDLDYCPPPYLLAEGRVNDN   DKASD+Q PSLSEPPS+ACRS
Sbjct: 22  IDVEKWESQDLDYCPPPYLLAEGRVNDNDNKDKASDQQRPSLSEPPSQACRS 73

Query: 66  125
           
Sbjct: 82  73

Query: 126 153
           
Sbjct: 142 73

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0KK23_CUCSA1.6e-2196.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G499860 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700193538|gb|KGN48742.1|5.1e-2196.00hypothetical protein Csa_6G499860 [Cucumis sativus][more]
gi|659080058|ref|XP_008440588.1|1.7e-1684.62PREDICTED: uncharacterized protein LOC103484965 [Cucumis melo][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa6G499860Csa6G499860gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
H0105396H0105396EST
H0157711H0157711EST