CU091959 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU091959
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr1 : 6346376 .. 6346735 (+)
Sequence length361
The following sequences are available for this feature:

transcribed_cluster sequence

GGCTTAAAAGCTGGACTATATATATATATATATATATTTTGGTAATGAACATAGAACGATTTTAATTAATGTAAAAAGTACAAAAGATAGAGATGTGAGAAGTAGATAAAAAGGAACACTTAGTAATAATTTTACCACCAATTTGGAATAAGTTATGATCTGAAGGTTCATCAGCGTCTTTGGCATGCGTCTCCAAATGAGCATACTCTTTAAACATAGTGGCAGCAAGTCGGTTCCAAGCAGTATGTGAACGCTCATCTTGATCATCTTCATTTTCCTCAAACAATGAATTATAATTTGGAATAATGGAAGGGAAACTCGTTGATTTTCTCATACGTTTCTTCATCTTCATCCTTCCCCC
BLAST of CU091959 vs. NCBI nr
Match: gi|778658307|ref|XP_011652476.1| (PREDICTED: uncharacterized protein LOC101218503 isoform X2 [Cucumis sativus])

HSP 1 Score: 135.2 bits (339), Expect = 7.6e-29
Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = -1

Query: 137 STSFPSIIPNYNSLFEENEDDQDERSHTAWNRLAATMFKEYAHLETHAKDADEPSDHNLF 196
           STSFPSIIPNYNSLFEENEDDQDERSHTAWNRLAATMFKEYAHLETHAKDADEPSDHNLF
Sbjct: 10  STSFPSIIPNYNSLFEENEDDQDERSHTAWNRLAATMFKEYAHLETHAKDADEPSDHNLF 69

Query: 197 QIG 256
           QIG
Sbjct: 70  QIG 72

Query: 257 316
           
Sbjct: 130 72

Query: 317 326
           
Sbjct: 190 72

BLAST of CU091959 vs. NCBI nr
Match: gi|778658304|ref|XP_011652468.1| (PREDICTED: uncharacterized protein LOC101218503 isoform X1 [Cucumis sativus])

HSP 1 Score: 135.2 bits (339), Expect = 7.6e-29
Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = -1

Query: 137 STSFPSIIPNYNSLFEENEDDQDERSHTAWNRLAATMFKEYAHLETHAKDADEPSDHNLF 196
           STSFPSIIPNYNSLFEENEDDQDERSHTAWNRLAATMFKEYAHLETHAKDADEPSDHNLF
Sbjct: 10  STSFPSIIPNYNSLFEENEDDQDERSHTAWNRLAATMFKEYAHLETHAKDADEPSDHNLF 69

Query: 197 QIG 256
           QIG
Sbjct: 70  QIG 72

Query: 257 316
           
Sbjct: 130 72

Query: 317 326
           
Sbjct: 190 72

BLAST of CU091959 vs. NCBI nr
Match: gi|659067654|ref|XP_008440590.1| (PREDICTED: uncharacterized protein LOC103484963 [Cucumis melo])

HSP 1 Score: 79.0 bits (193), Expect = 6.5e-12
Identity = 43/63 (68.25%), Postives = 47/63 (74.60%), Query Frame = -1

Query: 137 STSFPSIIPNYNSLFEENEDDQDERSHTAWNRLAATMFKEYAHLETHAKDADEPSDHNLF 196
           S S PSIIPNYNSLFEE+ED+     HTAWNRLAA MF +  HLET A D D+PSDH L 
Sbjct: 4   SKSLPSIIPNYNSLFEESEDEL--TLHTAWNRLAA-MFND-THLETQAIDTDQPSDHKLL 62

Query: 197 QIG 256
           QIG
Sbjct: 64  QIG 62

Query: 257 316
           
Sbjct: 124 62

Query: 317 326
           
Sbjct: 184 62

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
gi|778658307|ref|XP_011652476.1|7.6e-29100.00PREDICTED: uncharacterized protein LOC101218503 isoform X2 [Cucumis sativus][more]
gi|778658304|ref|XP_011652468.1|7.6e-29100.00PREDICTED: uncharacterized protein LOC101218503 isoform X1 [Cucumis sativus][more]
gi|659067654|ref|XP_008440590.1|6.5e-1268.25PREDICTED: uncharacterized protein LOC103484963 [Cucumis melo][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa1G058080Csa1G058080gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
FKNP3UI02NJCIOFKNP3UI02NJCIOEST
G0014755G0014755EST
G0036187G0036187EST
G0040550G0040550EST
G0182523G0182523EST
G0202544G0202544EST
H0076832H0076832EST