CU089311 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU089311
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionMitogen-activated protein kinase kinase 5
LocationChr1 : 4620474 .. 4620824 (-)
Sequence length353
The following sequences are available for this feature:

transcribed_cluster sequence

GGAGCTTTGTTGAGTGTTGTTTTGCAGAAGGAATCGGTAAAAGATGGACGGCGGCACAATTGTTGACGCATCCGTTTGTATGCAGGGAATCATCGAGATCATCGGATAATCGATGAATCCACGCCGTGAATTGTAAGGGTCCGAATGAATGTCAGTTTAAAATTAGCTCAAGCCAAATTGTGAGATCTGTACATGAACTTGCGGAATTCGGATGAACCTTTTCTTTCTGTATATATTCCTCTTTTTTCCTATTGGAATCTTCATCTGTAGCCATAGCATCTTTGAATCTCCTCCAAAATCCCCAGCAGAAATTCCGGAGAATTTTTGTACTTTTTGTATTAAAGAAAAATTTT
BLAST of CU089311 vs. TrEMBL
Match: A0A0U5PS50_CUCSA (MAP kinase Kinase 4 OS=Cucumis sativus GN=MKK4 PE=3 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 4.5e-09
Identity = 31/37 (83.78%), Postives = 32/37 (86.49%), Query Frame = 3

Query: 3   SFVECCFAEGIGKRWTAAQLLTHPFVCRESSRSSDNR 62
           SFVECC  +   KRWTAAQLLTHPFVCRESSRSSDNR
Sbjct: 284 SFVECCLQKESSKRWTAAQLLTHPFVCRESSRSSDNR 320

Query: 63  114
           
Sbjct: 344 320

BLAST of CU089311 vs. TrEMBL
Match: A0A0A0LQY3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G042980 PE=3 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 4.5e-09
Identity = 31/37 (83.78%), Postives = 32/37 (86.49%), Query Frame = 3

Query: 3   SFVECCFAEGIGKRWTAAQLLTHPFVCRESSRSSDNR 62
           SFVECC  +   KRWTAAQLLTHPFVCRESSRSSDNR
Sbjct: 284 SFVECCLQKESSKRWTAAQLLTHPFVCRESSRSSDNR 320

Query: 63  114
           
Sbjct: 344 320

BLAST of CU089311 vs. NCBI nr
Match: gi|974569602|emb|CUX76643.1| (MAP kinase Kinase 4 [Cucumis sativus])

HSP 1 Score: 70.9 bits (172), Expect = 1.7e-09
Identity = 31/37 (83.78%), Postives = 32/37 (86.49%), Query Frame = 3

Query: 3   SFVECCFAEGIGKRWTAAQLLTHPFVCRESSRSSDNR 62
           SFVECC  +   KRWTAAQLLTHPFVCRESSRSSDNR
Sbjct: 284 SFVECCLQKESSKRWTAAQLLTHPFVCRESSRSSDNR 320

Query: 63  114
           
Sbjct: 344 320

BLAST of CU089311 vs. NCBI nr
Match: gi|449439485|ref|XP_004137516.1| (PREDICTED: mitogen-activated protein kinase kinase 9 [Cucumis sativus])

HSP 1 Score: 70.9 bits (172), Expect = 1.7e-09
Identity = 31/37 (83.78%), Postives = 32/37 (86.49%), Query Frame = 3

Query: 3   SFVECCFAEGIGKRWTAAQLLTHPFVCRESSRSSDNR 62
           SFVECC  +   KRWTAAQLLTHPFVCRESSRSSDNR
Sbjct: 284 SFVECCLQKESSKRWTAAQLLTHPFVCRESSRSSDNR 320

Query: 63  114
           
Sbjct: 344 320

BLAST of CU089311 vs. NCBI nr
Match: gi|659066908|ref|XP_008466859.1| (PREDICTED: mitogen-activated protein kinase kinase 9 [Cucumis melo])

HSP 1 Score: 66.2 bits (160), Expect = 4.2e-08
Identity = 31/38 (81.58%), Postives = 32/38 (84.21%), Query Frame = 3

Query: 3   SFVECCFAEGIGKRWTAAQLLTHPFVCRESSR-SSDNR 62
           SFVECC  +   KRWTAAQLLTHPFVCRESSR SSDNR
Sbjct: 284 SFVECCLQKESSKRWTAAQLLTHPFVCRESSRSSSDNR 321

Query: 63  114
           
Sbjct: 344 321

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0U5PS50_CUCSA4.5e-0983.78MAP kinase Kinase 4 OS=Cucumis sativus GN=MKK4 PE=3 SV=1[more]
A0A0A0LQY3_CUCSA4.5e-0983.78Uncharacterized protein OS=Cucumis sativus GN=Csa_1G042980 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
gi|974569602|emb|CUX76643.1|1.7e-0983.78MAP kinase Kinase 4 [Cucumis sativus][more]
gi|449439485|ref|XP_004137516.1|1.7e-0983.78PREDICTED: mitogen-activated protein kinase kinase 9 [Cucumis sativus][more]
gi|659066908|ref|XP_008466859.1|4.2e-0881.58PREDICTED: mitogen-activated protein kinase kinase 9 [Cucumis melo][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa1G042980Csa1G042980gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
FKNP3UI02N4KSPFKNP3UI02N4KSPEST
G0027221G0027221EST
G0139586G0139586EST
H0015089H0015089EST
H0039759H0039759EST
H0115600H0115600EST
H0128193H0128193EST