CU088893 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU088893
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr4 : 11014445 .. 11014720 (+)
Sequence length275
The following sequences are available for this feature:

transcribed_cluster sequence

AACCCCATTGTAAAACATATGGAATAGGAAAGGGAAGTAAATGAAGTAAGGAAGAATAGTTACTTGGACGAAACAATCGTGGAAATGGAAGCGAATGAGTTTAGCACCAGCACGAATATCAGTTTCGATAGCTCTTTTGACTTCACGGCGGACAATGTTAGGGAGACGAGGGCAAGTTTGGTCGTAGAAATTCTCAGTGAGTTGGGCATAAGAGGTTACAAAGAAAACACAAAGAAACGAAAGGAAGAAACTGAAGGAACCCATCTTGTTTGGTC
BLAST of CU088893 vs. Swiss-Prot
Match: PERX_TOBAC (Lignin-forming anionic peroxidase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 1.3e-09
Identity = 29/49 (59.18%), Postives = 33/49 (67.35%), Query Frame = -3

Query: 67  SYAQLTENFYDQTCPRLPNIVRREVKRAIETDIRAGAKLIRFHFHDCFV 126
           S AQL+  FYD TCP + +IVR  + +   TD RAGAK+IR HFHDCFV
Sbjct: 20  SNAQLSATFYDTTCPNVTSIVRGVMDQRQRTDARAGAKIIRLHFHDCFV 68

Query: 127 186
           
Sbjct: 80  68

Query: 187 214
           
Sbjct: 140 68

BLAST of CU088893 vs. Swiss-Prot
Match: PER2_CUCSA (Peroxidase 2 (Fragment) OS=Cucumis sativus PE=2 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 1.3e-09
Identity = 27/41 (65.85%), Postives = 33/41 (80.49%), Query Frame = -3

Query: 67  FYDQTCPRLPNIVRREVKRAIETDIRAGAKLIRFHFHDCFV 126
           FYD++CP + NIVRR V++A+ +D RAGA+LIR HFHDCFV
Sbjct: 2   FYDESCPDVSNIVRRVVQQALVSDERAGARLIRLHFHDCFV 42

Query: 127 186
           
Sbjct: 62  42

Query: 187 190
           
Sbjct: 122 42

BLAST of CU088893 vs. Swiss-Prot
Match: PERX_NICSY (Lignin-forming anionic peroxidase OS=Nicotiana sylvestris PE=2 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 2.3e-09
Identity = 27/49 (55.10%), Postives = 32/49 (65.31%), Query Frame = -3

Query: 64  YAQLTENFYDQTCPRLPNIVRREVKRAIETDIRAGAKLIRFHFHDCFVQ 123
           +AQL+  FYD TCP   N +R  V++AI ++ R  A LIR HFHDCFVQ
Sbjct: 26  HAQLSATFYDNTCPNALNTIRTSVRQAISSERRMAASLIRLHFHDCFVQ 74

Query: 124 183
           
Sbjct: 86  74

Query: 184 211
           
Sbjct: 146 74

BLAST of CU088893 vs. Swiss-Prot
Match: PER53_ARATH (Peroxidase 53 OS=Arabidopsis thaliana GN=PER53 PE=1 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 2.3e-09
Identity = 28/50 (56.00%), Postives = 32/50 (64.00%), Query Frame = -3

Query: 67  TSYAQLTENFYDQTCPRLPNIVRREVKRAIETDIRAGAKLIRFHFHDCFV 126
           TS AQL   FY  TCP    IVR  +++A+++D R GA LIR HFHDCFV
Sbjct: 27  TSSAQLNATFYSGTCPNASAIVRSTIQQALQSDTRIGASLIRLHFHDCFV 76

Query: 127 186
           
Sbjct: 87  76

Query: 187 217
           
Sbjct: 147 76

BLAST of CU088893 vs. Swiss-Prot
Match: PER54_ARATH (Peroxidase 54 OS=Arabidopsis thaliana GN=PER54 PE=2 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 6.6e-09
Identity = 27/50 (54.00%), Postives = 31/50 (62.00%), Query Frame = -3

Query: 67  TSYAQLTENFYDQTCPRLPNIVRREVKRAIETDIRAGAKLIRFHFHDCFV 126
           TS AQL   FY  TCP    IVR  +++A+++D R G  LIR HFHDCFV
Sbjct: 28  TSSAQLNATFYSGTCPNASAIVRSTIQQALQSDARIGGSLIRLHFHDCFV 77

Query: 127 186
           
Sbjct: 88  77

Query: 187 217
           
Sbjct: 148 77

BLAST of CU088893 vs. TrEMBL
Match: A0A0A0L1T4_CUCSA (Peroxidase OS=Cucumis sativus GN=Csa_4G285770 PE=3 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 2.4e-21
Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = -3

Query: 64  TSYAQLTENFYDQTCPRLPNIVRREVKRAIETDIRAGAKLIRFHFHDCFVQ 123
           TSYAQLTENFYDQTCPRLPNIVRREVKRAIETDIRAGAKLIRFHFHDCFVQ
Sbjct: 17  TSYAQLTENFYDQTCPRLPNIVRREVKRAIETDIRAGAKLIRFHFHDCFVQ 67

Query: 124 183
           
Sbjct: 77  67

Query: 184 217
           
Sbjct: 137 67

BLAST of CU088893 vs. TrEMBL
Match: O65773_CUCPE (Peroxidase OS=Cucurbita pepo GN=aprx PE=2 SV=2)

HSP 1 Score: 103.6 bits (257), Expect = 1.3e-19
Identity = 48/50 (96.00%), Postives = 49/50 (98.00%), Query Frame = -3

Query: 64  SYAQLTENFYDQTCPRLPNIVRREVKRAIETDIRAGAKLIRFHFHDCFVQ 123
           SYAQLTE FYDQTCPRLPNIVR+EVKRAIETDIRAGAKLIRFHFHDCFVQ
Sbjct: 14  SYAQLTETFYDQTCPRLPNIVRQEVKRAIETDIRAGAKLIRFHFHDCFVQ 63

Query: 124 183
           
Sbjct: 74  63

Query: 184 214
           
Sbjct: 134 63

BLAST of CU088893 vs. TrEMBL
Match: Q19MQ5_CUCPE (Peroxidase OS=Cucurbita pepo GN=aprx PE=3 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 1.3e-19
Identity = 48/50 (96.00%), Postives = 49/50 (98.00%), Query Frame = -3

Query: 64  SYAQLTENFYDQTCPRLPNIVRREVKRAIETDIRAGAKLIRFHFHDCFVQ 123
           SYAQLTE FYDQTCPRLPNIVR+EVKRAIETDIRAGAKLIRFHFHDCFVQ
Sbjct: 14  SYAQLTETFYDQTCPRLPNIVRQEVKRAIETDIRAGAKLIRFHFHDCFVQ 63

Query: 124 183
           
Sbjct: 74  63

Query: 184 214
           
Sbjct: 134 63

BLAST of CU088893 vs. TrEMBL
Match: A0A0U2D7M1_LUFAE (Peroxidase OS=Luffa aegyptiaca PE=2 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 1.4e-18
Identity = 46/50 (92.00%), Postives = 49/50 (98.00%), Query Frame = -3

Query: 64  SYAQLTENFYDQTCPRLPNIVRREVKRAIETDIRAGAKLIRFHFHDCFVQ 123
           S+AQLTE+FYDQTCPRLPNIVRREVKRAIE+DIRAGAKLIR HFHDCFVQ
Sbjct: 20  SFAQLTEDFYDQTCPRLPNIVRREVKRAIESDIRAGAKLIRLHFHDCFVQ 69

Query: 124 183
           
Sbjct: 80  69

Query: 184 214
           
Sbjct: 140 69

BLAST of CU088893 vs. TrEMBL
Match: A0A0A0KZ63_CUCSA (Peroxidase OS=Cucumis sativus GN=Csa_4G285750 PE=3 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 3.3e-15
Identity = 39/50 (78.00%), Postives = 46/50 (92.00%), Query Frame = -3

Query: 67  TSYAQLTENFYDQTCPRLPNIVRREVKRAIETDIRAGAKLIRFHFHDCFV 126
           +S+AQL+E +YDQTCPRLPNIVR  VK+AI++DIRAGAKLIR HFHDCFV
Sbjct: 17  SSFAQLSETYYDQTCPRLPNIVRASVKKAIQSDIRAGAKLIRLHFHDCFV 66

Query: 127 186
           
Sbjct: 77  66

Query: 187 217
           
Sbjct: 137 66

BLAST of CU088893 vs. NCBI nr
Match: gi|449448788|ref|XP_004142147.1| (PREDICTED: peroxidase 2-like [Cucumis sativus])

HSP 1 Score: 109.8 bits (273), Expect = 2.6e-21
Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = -3

Query: 64  TSYAQLTENFYDQTCPRLPNIVRREVKRAIETDIRAGAKLIRFHFHDCFVQ 123
           TSYAQLTENFYDQTCPRLPNIVRREVKRAIETDIRAGAKLIRFHFHDCFVQ
Sbjct: 17  TSYAQLTENFYDQTCPRLPNIVRREVKRAIETDIRAGAKLIRFHFHDCFVQ 67

Query: 124 183
           
Sbjct: 77  67

Query: 184 217
           
Sbjct: 137 67

BLAST of CU088893 vs. NCBI nr
Match: gi|659097715|ref|XP_008449774.1| (PREDICTED: peroxidase 2-like [Cucumis melo])

HSP 1 Score: 108.2 bits (269), Expect = 7.5e-21
Identity = 50/51 (98.04%), Postives = 51/51 (100.00%), Query Frame = -3

Query: 64  TSYAQLTENFYDQTCPRLPNIVRREVKRAIETDIRAGAKLIRFHFHDCFVQ 123
           TSYAQLTENFY+QTCPRLPNIVRREVKRAIETDIRAGAKLIRFHFHDCFVQ
Sbjct: 17  TSYAQLTENFYEQTCPRLPNIVRREVKRAIETDIRAGAKLIRFHFHDCFVQ 67

Query: 124 183
           
Sbjct: 77  67

Query: 184 217
           
Sbjct: 137 67

BLAST of CU088893 vs. NCBI nr
Match: gi|99906997|gb|ABF68751.1| (class III peroxidase precursor [Cucurbita pepo])

HSP 1 Score: 104.0 bits (258), Expect = 1.4e-19
Identity = 48/50 (96.00%), Postives = 49/50 (98.00%), Query Frame = -3

Query: 64  SYAQLTENFYDQTCPRLPNIVRREVKRAIETDIRAGAKLIRFHFHDCFVQ 123
           SYAQLTE FYDQTCPRLPNIVR+EVKRAIETDIRAGAKLIRFHFHDCFVQ
Sbjct: 14  SYAQLTETFYDQTCPRLPNIVRQEVKRAIETDIRAGAKLIRFHFHDCFVQ 63

Query: 124 183
           
Sbjct: 74  63

Query: 184 214
           
Sbjct: 134 63

BLAST of CU088893 vs. NCBI nr
Match: gi|3927894|emb|CAA76680.1| (peroxidase [Cucurbita pepo])

HSP 1 Score: 104.0 bits (258), Expect = 1.4e-19
Identity = 48/50 (96.00%), Postives = 49/50 (98.00%), Query Frame = -3

Query: 64  SYAQLTENFYDQTCPRLPNIVRREVKRAIETDIRAGAKLIRFHFHDCFVQ 123
           SYAQLTE FYDQTCPRLPNIVR+EVKRAIETDIRAGAKLIRFHFHDCFVQ
Sbjct: 14  SYAQLTETFYDQTCPRLPNIVRQEVKRAIETDIRAGAKLIRFHFHDCFVQ 63

Query: 124 183
           
Sbjct: 74  63

Query: 184 214
           
Sbjct: 134 63

BLAST of CU088893 vs. NCBI nr
Match: gi|844289598|gb|AKN08989.1| (peroxidase [Luffa aegyptiaca])

HSP 1 Score: 100.5 bits (249), Expect = 1.6e-18
Identity = 46/50 (92.00%), Postives = 49/50 (98.00%), Query Frame = -3

Query: 64  SYAQLTENFYDQTCPRLPNIVRREVKRAIETDIRAGAKLIRFHFHDCFVQ 123
           S+AQLTE+FYDQTCPRLPNIVRREVKRAIE+DIRAGAKLIR HFHDCFVQ
Sbjct: 20  SFAQLTEDFYDQTCPRLPNIVRREVKRAIESDIRAGAKLIRLHFHDCFVQ 69

Query: 124 183
           
Sbjct: 80  69

Query: 184 214
           
Sbjct: 140 69

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PERX_TOBAC1.3e-0959.18Lignin-forming anionic peroxidase OS=Nicotiana tabacum PE=2 SV=1[more]
PER2_CUCSA1.3e-0965.85Peroxidase 2 (Fragment) OS=Cucumis sativus PE=2 SV=1[more]
PERX_NICSY2.3e-0955.10Lignin-forming anionic peroxidase OS=Nicotiana sylvestris PE=2 SV=1[more]
PER53_ARATH2.3e-0956.00Peroxidase 53 OS=Arabidopsis thaliana GN=PER53 PE=1 SV=1[more]
PER54_ARATH6.6e-0954.00Peroxidase 54 OS=Arabidopsis thaliana GN=PER54 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0L1T4_CUCSA2.4e-21100.00Peroxidase OS=Cucumis sativus GN=Csa_4G285770 PE=3 SV=1[more]
O65773_CUCPE1.3e-1996.00Peroxidase OS=Cucurbita pepo GN=aprx PE=2 SV=2[more]
Q19MQ5_CUCPE1.3e-1996.00Peroxidase OS=Cucurbita pepo GN=aprx PE=3 SV=1[more]
A0A0U2D7M1_LUFAE1.4e-1892.00Peroxidase OS=Luffa aegyptiaca PE=2 SV=1[more]
A0A0A0KZ63_CUCSA3.3e-1578.00Peroxidase OS=Cucumis sativus GN=Csa_4G285750 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
gi|449448788|ref|XP_004142147.1|2.6e-21100.00PREDICTED: peroxidase 2-like [Cucumis sativus][more]
gi|659097715|ref|XP_008449774.1|7.5e-2198.04PREDICTED: peroxidase 2-like [Cucumis melo][more]
gi|99906997|gb|ABF68751.1|1.4e-1996.00class III peroxidase precursor [Cucurbita pepo][more]
gi|3927894|emb|CAA76680.1|1.4e-1996.00peroxidase [Cucurbita pepo][more]
gi|844289598|gb|AKN08989.1|1.6e-1892.00peroxidase [Luffa aegyptiaca][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa4G285770Csa4G285770gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
G0034612G0034612EST
H0036034H0036034EST