CU088656 (transcribed_cluster) Cucumber (Chinese Long) v2

Overview
NameCU088656
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr1 : 8976756 .. 8976998 (+)
Sequence length259
Genome Viewer
Sequences
The following sequences are available for this feature:

transcribed_cluster sequence

GAGTTTGAGGAAATCAATGGTGGGAATGCTTTCGAGGACATCCCAAAACGCAGCCTACCATTGACACTTTGCCTTATGACTTCGAGTTTCAATATCTTTTGCCTTTGTAAAATCTAATTCTTTAAATTTGAGGAATAATCAATTATTTGGATAAGGGGTTCTTTTTTTCATTATTATTATTTTGAATTTAATTTTTGATGGGTTTTGATTTGTATATTGGATAATTCATAATCACTAACTTTTTTATAGGAAAAAAAAA
Homology
[Close]
BLAST of CU088656 vs. TrEMBL
Match: A0A0A0LSP4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G118870 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 3.4e-06
Identity = 24/24 (100.00%), Postives = 24/24 (100.00%), Query Frame = 3 

Query: 24  ECFRGHPKTQPTIDTLPYDFEFQY 83
           ECFRGHPKTQPTIDTLPYDFEFQY
Sbjct: 547 ECFRGHPKTQPTIDTLPYDFEFQY 570

Query: 84   96
           
Sbjct: 607  570

[Close]
BLAST of CU088656 vs. NCBI nr
Match: gi|700209722|gb|KGN64818.1| (hypothetical protein Csa_1G118870 [Cucumis sativus])

HSP 1 Score: 60.5 bits (145), Expect = 1.7e-06
Identity = 24/24 (100.00%), Postives = 24/24 (100.00%), Query Frame = 3 

Query: 24  ECFRGHPKTQPTIDTLPYDFEFQY 83
           ECFRGHPKTQPTIDTLPYDFEFQY
Sbjct: 547 ECFRGHPKTQPTIDTLPYDFEFQY 570

Query: 84   96
           
Sbjct: 607  570

[Close]
BLAST of CU088656 vs. NCBI nr
Match: gi|449443572|ref|XP_004139551.1| (PREDICTED: uncharacterized protein LOC101221529 [Cucumis sativus])

HSP 1 Score: 60.5 bits (145), Expect = 1.7e-06
Identity = 24/24 (100.00%), Postives = 24/24 (100.00%), Query Frame = 3 

Query: 24  ECFRGHPKTQPTIDTLPYDFEFQY 83
           ECFRGHPKTQPTIDTLPYDFEFQY
Sbjct: 550 ECFRGHPKTQPTIDTLPYDFEFQY 573

Query: 84   96
           
Sbjct: 610  573

The following BLAST results are available for this feature:
BLAST of CU088656 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LSP4_CUCSA3.4e-06100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G118870 PE=4 SV=1[more]
BLAST of CU088656 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700209722|gb|KGN64818.1|1.7e-06100.00hypothetical protein Csa_1G118870 [Cucumis sativus][more]
gi|449443572|ref|XP_004139551.1|1.7e-06100.00PREDICTED: uncharacterized protein LOC101221529 [Cucumis sativus][more]
Relationships

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa1G118870Csa1G118870gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
G0017253G0017253EST
H0080578H0080578EST