CU087193 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU087193
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr6 : 20211906 .. 20218586 (+)
Sequence length265
The following sequences are available for this feature:

transcribed_cluster sequence

ATAGAGAACAGTTTTTTGCCAGGGGGATTATTTGAGAATGAATTCGATATCGTGTTCACGGTAGGGCAGATCGGAGCCCGATTTGTTGACCGTGTTCTTAGAAGCGGCGGGGCGGTGGTTCTTCCGGCGACGGATATTTCTGATCGTGTTCAGTTCATGAAAAGAAAGGAATCTTCTCTACTCTGAGCTTCGGTCCATGAAATCCAGCAACCACGGTTCTTCGAATCCAAATGATACCTGAACTGCGTACGAATTAAAAACTAGG
Library categoryESTs
fruit (8DPP) library3
BLAST of CU087193 vs. TrEMBL
Match: A0A0A0KJZ0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G427990 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 3.4e-17
Identity = 48/50 (96.00%), Postives = 48/50 (96.00%), Query Frame = 1

Query: 1   IENSFLPGGLFENEFDIVFTVGQIGARFVDRVLRSGGAVVLPATDISDRV 60
           IENSFLPGGLFENEFDIVFTVGQIGARFVDRVLRSGGAVVLPATDIS  V
Sbjct: 126 IENSFLPGGLFENEFDIVFTVGQIGARFVDRVLRSGGAVVLPATDISVNV 175

Query: 61  120
           
Sbjct: 186 175

Query: 121 151
           
Sbjct: 246 175

BLAST of CU087193 vs. TrEMBL
Match: A0A0A0KGY9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G428020 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 7.1e-07
Identity = 28/28 (100.00%), Postives = 28/28 (100.00%), Query Frame = -2

Query: 181 LVFNSYAVQVSFGFEEPWLLDFMDRSSE 240
           LVFNSYAVQVSFGFEEPWLLDFMDRSSE
Sbjct: 43  LVFNSYAVQVSFGFEEPWLLDFMDRSSE 70

Query: 241 265
           
Sbjct: 103 70

BLAST of CU087193 vs. NCBI nr
Match: gi|778722330|ref|XP_011658464.1| (PREDICTED: uncharacterized protein LOC105436015 [Cucumis sativus])

HSP 1 Score: 97.1 bits (240), Expect = 1.7e-17
Identity = 48/50 (96.00%), Postives = 48/50 (96.00%), Query Frame = 1

Query: 1   IENSFLPGGLFENEFDIVFTVGQIGARFVDRVLRSGGAVVLPATDISDRV 60
           IENSFLPGGLFENEFDIVFTVGQIGARFVDRVLRSGGAVVLPATDIS  V
Sbjct: 126 IENSFLPGGLFENEFDIVFTVGQIGARFVDRVLRSGGAVVLPATDISVNV 175

Query: 61  120
           
Sbjct: 186 175

Query: 121 151
           
Sbjct: 246 175

BLAST of CU087193 vs. NCBI nr
Match: gi|700192865|gb|KGN48069.1| (hypothetical protein Csa_6G428020 [Cucumis sativus])

HSP 1 Score: 62.0 bits (149), Expect = 6.0e-07
Identity = 28/28 (100.00%), Postives = 28/28 (100.00%), Query Frame = -2

Query: 181 LVFNSYAVQVSFGFEEPWLLDFMDRSSE 240
           LVFNSYAVQVSFGFEEPWLLDFMDRSSE
Sbjct: 43  LVFNSYAVQVSFGFEEPWLLDFMDRSSE 70

Query: 241 265
           
Sbjct: 103 70

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0KJZ0_CUCSA3.4e-1796.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G427990 PE=4 SV=1[more]
A0A0A0KGY9_CUCSA7.1e-07100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G428020 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|778722330|ref|XP_011658464.1|1.7e-1796.00PREDICTED: uncharacterized protein LOC105436015 [Cucumis sativus][more]
gi|700192865|gb|KGN48069.1|6.0e-07100.00hypothetical protein Csa_6G428020 [Cucumis sativus][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa6G428000Csa6G428000gene
Csa6G428010Csa6G428010gene
Csa6G427990Csa6G427990gene
Csa6G428020Csa6G428020gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
FKNP3UI02MFA4VFKNP3UI02MFA4VEST
FKNP3UI02MVVTMFKNP3UI02MVVTMEST
FKNP3UI02OT8UKFKNP3UI02OT8UKEST