CU086979 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU086979
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr1 : 6374172 .. 6374811 (+)
Sequence length225
The following sequences are available for this feature:

transcribed_cluster sequence

GCTTAAGTAGTTTTTTGTAATTAAATTAATAAAAACTAACAATGATTATTGATGGACTTTTTCCAAAAGTTGAATCTCTTCCTGCCACCGATTGCTGATGATTTTCTGGCTAGCACAAGCAATGCAAGCTCATTGTTGTTATTTTCGTCTTCCACAATTGCTAACTTCTCATTTTTTTCAAAAATCTTCATACTCATGTCATAGAAGTTGCTATGTATGGAGGCA
Library categoryESTs
fruit (8DPP) library2
BLAST of CU086979 vs. TrEMBL
Match: A0A0A0LWX0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G058110 PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 1.5e-18
Identity = 49/62 (79.03%), Postives = 49/62 (79.03%), Query Frame = -2

Query: 39  ASIHSNFYDMSMKIFEKNEKLAIVEDXXXXXXXXXXXXXRKSSAIGGRKRFNFWKKSINN 98
           ASIHSNFYDMSMKIFEKNEKLAIVED             RKSSAIGGRKRFNFWKKSINN
Sbjct: 249 ASIHSNFYDMSMKIFEKNEKLAIVEDENNNNELALLVLARKSSAIGGRKRFNFWKKSINN 308

Query: 99  HC 158
           HC
Sbjct: 309 HC 310

Query: 159 218
           
Sbjct: 369 310

Query: 219 225
           
Sbjct: 429 310

BLAST of CU086979 vs. NCBI nr
Match: gi|778658316|ref|XP_011652495.1| (PREDICTED: ankyrin repeat-containing protein At3g12360 isoform X2 [Cucumis sativus])

HSP 1 Score: 100.9 bits (250), Expect = 9.8e-19
Identity = 49/62 (79.03%), Postives = 49/62 (79.03%), Query Frame = -2

Query: 39  ASIHSNFYDMSMKIFEKNEKLAIVEDXXXXXXXXXXXXXRKSSAIGGRKRFNFWKKSINN 98
           ASIHSNFYDMSMKIFEKNEKLAIVED             RKSSAIGGRKRFNFWKKSINN
Sbjct: 133 ASIHSNFYDMSMKIFEKNEKLAIVEDENNNNELALLVLARKSSAIGGRKRFNFWKKSINN 192

Query: 99  HC 158
           HC
Sbjct: 193 HC 194

Query: 159 218
           
Sbjct: 253 194

Query: 219 225
           
Sbjct: 313 194

BLAST of CU086979 vs. NCBI nr
Match: gi|449470726|ref|XP_004153067.1| (PREDICTED: ankyrin repeat-containing protein At3g12360 isoform X1 [Cucumis sativus])

HSP 1 Score: 100.9 bits (250), Expect = 9.8e-19
Identity = 49/62 (79.03%), Postives = 49/62 (79.03%), Query Frame = -2

Query: 39  ASIHSNFYDMSMKIFEKNEKLAIVEDXXXXXXXXXXXXXRKSSAIGGRKRFNFWKKSINN 98
           ASIHSNFYDMSMKIFEKNEKLAIVED             RKSSAIGGRKRFNFWKKSINN
Sbjct: 249 ASIHSNFYDMSMKIFEKNEKLAIVEDENNNNELALLVLARKSSAIGGRKRFNFWKKSINN 308

Query: 99  HC 158
           HC
Sbjct: 309 HC 310

Query: 159 218
           
Sbjct: 369 310

Query: 219 225
           
Sbjct: 429 310

BLAST of CU086979 vs. NCBI nr
Match: gi|659067665|ref|XP_008440652.1| (PREDICTED: ankyrin repeat-containing protein At3g12360-like [Cucumis melo])

HSP 1 Score: 84.7 bits (208), Expect = 7.3e-14
Identity = 40/62 (64.52%), Postives = 43/62 (69.35%), Query Frame = -2

Query: 39  ASIHSNFYDMSMKIFEKNEKLAIVEDXXXXXXXXXXXXXRKSSAIGGRKRFNFWKKSINN 98
           A+IHSNFYDMS+KIFE+N  LAIVED             RKSSAIGGR  FN WKK INN
Sbjct: 247 ATIHSNFYDMSLKIFEENSNLAIVEDEKNNNELALLVLARKSSAIGGRNTFNIWKKCINN 306

Query: 99  HC 158
           HC
Sbjct: 307 HC 308

Query: 159 218
           
Sbjct: 367 308

Query: 219 225
           
Sbjct: 427 308

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LWX0_CUCSA1.5e-1879.03Uncharacterized protein OS=Cucumis sativus GN=Csa_1G058110 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|778658316|ref|XP_011652495.1|9.8e-1979.03PREDICTED: ankyrin repeat-containing protein At3g12360 isoform X2 [Cucumis sativ... [more]
gi|449470726|ref|XP_004153067.1|9.8e-1979.03PREDICTED: ankyrin repeat-containing protein At3g12360 isoform X1 [Cucumis sativ... [more]
gi|659067665|ref|XP_008440652.1|7.3e-1464.52PREDICTED: ankyrin repeat-containing protein At3g12360-like [Cucumis melo][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa1G058110Csa1G058110gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
FKNP3UI02M1YQ9FKNP3UI02M1YQ9EST
FKNP3UI02N621AFKNP3UI02N621AEST