CU086846 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU086846
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr1 : 19790 .. 20289 (-)
Sequence length267
The following sequences are available for this feature:

transcribed_cluster sequence

AGAATTACTAGACCCAAGATTGAAATTGACTCCAGCATTATTTATCAGAATATCCAAACCACCATAGTTTTGCAGCAGCCAAGTCAGCAAATTGTTTGATGGATAAAGCATCCAAGACATCCAATTGATGAAAGGCAACATTCAGGCCACCTTCCTGTAAAACTTTTAGCTGCTTCAAGGCCAACACAAACATCTCTTGAAGTCAAGATCACGGTCATTCCATGCATTGCAATTGCCTTGAAATCTTCAAATCCAAGTTCCTCTCCC
Library categoryESTs
fruit (8DPP) library3
BLAST of CU086846 vs. TrEMBL
Match: A0A0A0LNP6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G000030 PE=3 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 2.1e-06
Identity = 27/27 (100.00%), Postives = 27/27 (100.00%), Query Frame = -1

Query: 1   WLLQNYGGLDILINNAGVNFNLGSSNS 60
           WLLQNYGGLDILINNAGVNFNLGSSNS
Sbjct: 106 WLLQNYGGLDILINNAGVNFNLGSSNS 132

Query: 61  82
           
Sbjct: 166 132

BLAST of CU086846 vs. TrEMBL
Match: A0A0A0LNP6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G000030 PE=3 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 2.7e-06
Identity = 29/34 (85.29%), Postives = 31/34 (91.18%), Query Frame = -3

Query: 83  LALKQLKVLQEGGLNVAFHQLDVLDALSIKQFAD 142
           + L+  KVLQEGGLNVAFHQLDVLDALSIKQFAD
Sbjct: 72  VGLEAAKVLQEGGLNVAFHQLDVLDALSIKQFAD 105

Query: 143 185
           
Sbjct: 132 105


HSP 2 Score: 52.8 bits (125), Expect = 2.5e-04
Identity = 25/31 (80.65%), Postives = 27/31 (87.10%), Query Frame = -2

Query: 165 LGFEDFKAIAMHGMTVILTSRDVCVGLEAAK 224
           +GFE  +  AMHGMTVILTSRDVCVGLEAAK
Sbjct: 48  IGFEISRQFAMHGMTVILTSRDVCVGLEAAK 78

Query: 225 258
           
Sbjct: 108 78


HSP 3 Score: 59.3 bits (142), Expect = 2.7e-06
Identity = 29/34 (85.29%), Postives = 31/34 (91.18%), Query Frame = -3

Query: 83  LALKQLKVLQEGGLNVAFHQLDVLDALSIKQFAD 142
           + L+  KVLQEGGLNVAFHQLDVLDALSIKQFAD
Sbjct: 72  VGLEAAKVLQEGGLNVAFHQLDVLDALSIKQFAD 105

Query: 143 185
           
Sbjct: 132 105

BLAST of CU086846 vs. TrEMBL
Match: E5GBL1_CUCME (Short-chain dehydrogenase/reductase family protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 2.5e-04
Identity = 25/31 (80.65%), Postives = 27/31 (87.10%), Query Frame = -2

Query: 165 LGFEDFKAIAMHGMTVILTSRDVCVGLEAAK 224
           +GFE  +  AMHGMTVILTSRDVCVGLEAAK
Sbjct: 48  IGFEISRQFAMHGMTVILTSRDVCVGLEAAK 78

Query: 225 258
           
Sbjct: 108 78


HSP 2 Score: 48.9 bits (115), Expect = 3.7e-03
Identity = 27/44 (61.36%), Postives = 27/44 (61.36%), Query Frame = -1

Query: 1   WLLQNYGGLDIL-----------------INNAGVNFNLGSSNS 60
           WLLQNYGGLDIL                 INNAGVNFNLGSSNS
Sbjct: 106 WLLQNYGGLDILANDITSKFPIYVQLCPQINNAGVNFNLGSSNS 149

Query: 61  82
           
Sbjct: 166 149


HSP 3 Score: 58.2 bits (139), Expect = 6.1e-06
Identity = 25/32 (78.12%), Postives = 28/32 (87.50%), Query Frame = -1

Query: 1   NNLLTWLLQNYGGLDILINNAGVNFNLGSSNS 60
           N+ + WL QNYGGLDIL+NNAGVNFNLGS NS
Sbjct: 104 NHFVEWLQQNYGGLDILVNNAGVNFNLGSDNS 135

Query: 61  97
           
Sbjct: 164 135

BLAST of CU086846 vs. TrEMBL
Match: G7I950_MEDTR (Short chain dehydrogenase/reductase OS=Medicago truncatula GN=MTR_1g031180 PE=3 SV=1)

HSP 1 Score: 38.1 bits (87), Expect = 6.5e+00
Identity = 17/31 (54.84%), Postives = 22/31 (70.97%), Query Frame = -2

Query: 165 LGFEDFKAIAMHGMTVILTSRDVCVGLEAAK 224
           +GFE  + +A HG+TVILTSRD   G E+ K
Sbjct: 51  IGFEICRQLAAHGLTVILTSRDASAGAESIK 81

Query: 225 258
           
Sbjct: 111 81


HSP 2 Score: 37.0 bits (84), Expect = 1.4e+01
Identity = 14/31 (45.16%), Postives = 23/31 (74.19%), Query Frame = -3

Query: 83  KQLKVLQEGGLNVAFHQLDVLDALSIKQFAD 142
           + +K+LQEGGL+V +H+LD++   SI  F +
Sbjct: 78  ESIKILQEGGLDVVYHRLDIVHESSINHFVE 108

Query: 143 176
           
Sbjct: 138 108

BLAST of CU086846 vs. NCBI nr
Match: gi|659128763|ref|XP_008464357.1| (PREDICTED: LOW QUALITY PROTEIN: carbonyl reductase [NADPH])

HSP 1 Score: 60.5 bits (145), Expect = 1.7e-06
Identity = 29/34 (85.29%), Postives = 31/34 (91.18%), Query Frame = -3

Query: 83  LALKQLKVLQEGGLNVAFHQLDVLDALSIKQFAD 142
           + L+  KVLQEGGLNVAFHQLDVLDALSIKQFAD
Sbjct: 72  VGLEAAKVLQEGGLNVAFHQLDVLDALSIKQFAD 105

Query: 143 185
           
Sbjct: 132 105

BLAST of CU086846 vs. NCBI nr
Match: gi|449440486|ref|XP_004138015.1| (PREDICTED: (+)-neomenthol dehydrogenase-like [Cucumis sativus])

HSP 1 Score: 60.5 bits (145), Expect = 1.7e-06
Identity = 29/34 (85.29%), Postives = 31/34 (91.18%), Query Frame = -3

Query: 83  LALKQLKVLQEGGLNVAFHQLDVLDALSIKQFAD 142
           + L+  KVLQEGGLNVAFHQLDVLDALSIKQFAD
Sbjct: 72  VGLEAAKVLQEGGLNVAFHQLDVLDALSIKQFAD 105

Query: 143 185
           
Sbjct: 132 105

BLAST of CU086846 vs. NCBI nr
Match: gi|307136013|gb|ADN33869.1| (short-chain dehydrogenase/reductase family protein [Cucumis melo subsp. melo])

HSP 1 Score: 60.5 bits (145), Expect = 1.7e-06
Identity = 29/34 (85.29%), Postives = 31/34 (91.18%), Query Frame = -3

Query: 83  LALKQLKVLQEGGLNVAFHQLDVLDALSIKQFAD 142
           + L+  KVLQEGGLNVAFHQLDVLDALSIKQFAD
Sbjct: 72  VGLEAAKVLQEGGLNVAFHQLDVLDALSIKQFAD 105

Query: 143 185
           
Sbjct: 132 105

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LNP6_CUCSA2.1e-06100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G000030 PE=3 SV=1[more]
A0A0A0LNP6_CUCSA2.7e-0685.29Uncharacterized protein OS=Cucumis sativus GN=Csa_1G000030 PE=3 SV=1[more]
E5GBL1_CUCME2.5e-0480.65Short-chain dehydrogenase/reductase family protein OS=Cucumis melo subsp. melo P... [more]
G7I950_MEDTR6.5e+0054.84Short chain dehydrogenase/reductase OS=Medicago truncatula GN=MTR_1g031180 PE=3 ... [more]
Match NameE-valueIdentityDescription
gi|659128763|ref|XP_008464357.1|1.7e-0685.29PREDICTED: LOW QUALITY PROTEIN: carbonyl reductase [NADPH][more]
gi|449440486|ref|XP_004138015.1|1.7e-0685.29PREDICTED: (+)-neomenthol dehydrogenase-like [Cucumis sativus][more]
gi|307136013|gb|ADN33869.1|1.7e-0685.29short-chain dehydrogenase/reductase family protein [Cucumis melo subsp. melo][more]
The following terms have been associated with this transcribed_cluster:
Vocabulary: INTERPRO
TermDefinition
IPR016040NAD(P)-bd_dom

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa1G000030Csa1G000030gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
FKNP3UI02LMFYJFKNP3UI02LMFYJEST
FKNP3UI02LTBLKFKNP3UI02LTBLKEST
FKNP3UI02NV9U5FKNP3UI02NV9U5EST


Analysis Name: InterPro Annotations of cucumber unigene v3
Date Performed: 2016-11-16
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016040NAD(P)-binding domainGENE3DG3DSA:3.40.50.720coord: 5..67
score: 1.
IPR016040NAD(P)-binding domainunknownSSF51735NAD(P)-binding Rossmann-fold domainscoord: 5..67
score: 6.9