CU085837 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU085837
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr1 : 3106771 .. 3107562 (-)
Sequence length799
The following sequences are available for this feature:

transcribed_cluster sequence

TTTTAAGAATAAAGAGCTACATGTAGGCATTGGACAAAGGTTATTTACCAACAAGTTAACGTTTGTCAAAATGATTCAATCCTGGCGTCTCATACACAACAAAATACAAGCCTTAGAATTGGAGCTCATTTGCGTGGTTCGCATTGGTCTTCTAGATTTCAAGTTTGATCCAAGGTACGAAAGGTCCTAAAAGTGTTTCATACTTCAACAGACGTTAAAAGAGCCAAAACTTGGCAACAGGACGCTGCTGGGACGATTCACATCAAACTCCCGCCCATTGTTTCTCTAAACGAACTACATTTACATAATTTAATTTAACAAACAGAAAACCGTTAGTTTCATCCCAGAAACAAGCCAACAACTGTTTTGAGATTCGATGTTATTCTAAACATGTACTTAAGAAGCCAACACTGGAACCCGCTTTTGACCAATAAAAACTTCTCTAAGCATATGATATCCACTCCTGTAGTGCTCAATCGAAAAACATAGCTGCCTTATAGCCTCTCTCTTTTCCTCGGCTCCTTCCATTATCAGTATTCTTTGCTTCTCCACCTCCCCCTCCAGCTCCTTCTCTCTTAATCTTAACTTCTCCGCCACCTTGTCTGCTTTATCAATACCTGACACTAGTTCCACACGTTCCCTTTCCAATTTTTCCACATGCTTCCTTATATCATCTACCTGCTTATCTTTTAGACCTCAGTTTCTCTTTCAAAGCAACAATTTCATCCTGTAGCTGATCCCTTTCAGATTCCAAATCATTCAGACCCAATTTTTAAAAATACTCCATGCATTCTACTTT
BLAST of CU085837 vs. TrEMBL
Match: A0A068VLD4_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00011429001 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 3.4e-12
Identity = 36/45 (80.00%), Postives = 42/45 (93.33%), Query Frame = -2

Query: 400 LIMEGAEEKREAIRQLCFSIEHYRSGYHMLREVFIGQKRVPVLAS 459
           LI+EGAEEKREAIRQLCFS+EHYR+GYHMLR+  IG KR+PV+AS
Sbjct: 636 LILEGAEEKREAIRQLCFSLEHYRNGYHMLRQAVIGHKRLPVMAS 680

Query: 460 519
           
Sbjct: 696 680

Query: 520 535
           
Sbjct: 756 680

BLAST of CU085837 vs. TrEMBL
Match: A0A0D2UK24_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G111800 PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 4.5e-12
Identity = 35/46 (76.09%), Postives = 42/46 (91.30%), Query Frame = -2

Query: 400 ILIMEGAEEKREAIRQLCFSIEHYRSGYHMLREVFIGQKRVPVLAS 459
           I+I+EGAEEKREAIRQLCFS++HYR GYH LR+ F+GQKRVPVL +
Sbjct: 573 IMILEGAEEKREAIRQLCFSLDHYRDGYHWLRQAFMGQKRVPVLTT 618

Query: 460 519
           
Sbjct: 633 618

Query: 520 538
           
Sbjct: 693 618

BLAST of CU085837 vs. TrEMBL
Match: A0A0D2THT2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G111800 PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 4.5e-12
Identity = 35/46 (76.09%), Postives = 42/46 (91.30%), Query Frame = -2

Query: 400 ILIMEGAEEKREAIRQLCFSIEHYRSGYHMLREVFIGQKRVPVLAS 459
           I+I+EGAEEKREAIRQLCFS++HYR GYH LR+ F+GQKRVPVL +
Sbjct: 530 IMILEGAEEKREAIRQLCFSLDHYRDGYHWLRQAFMGQKRVPVLTT 575

Query: 460 519
           
Sbjct: 590 575

Query: 520 538
           
Sbjct: 650 575

BLAST of CU085837 vs. TrEMBL
Match: A0A0B0MNS0_GOSAR (Transforming acidic coiled-coil-containing 2 OS=Gossypium arboreum GN=F383_24121 PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 4.5e-12
Identity = 35/46 (76.09%), Postives = 42/46 (91.30%), Query Frame = -2

Query: 400 ILIMEGAEEKREAIRQLCFSIEHYRSGYHMLREVFIGQKRVPVLAS 459
           I+I+EGAEEKREAIRQLCFS++HYR GYH LR+ F+GQKRVPVL +
Sbjct: 634 IMILEGAEEKREAIRQLCFSLDHYRDGYHWLRQAFMGQKRVPVLTT 679

Query: 460 519
           
Sbjct: 694 679

Query: 520 538
           
Sbjct: 754 679

BLAST of CU085837 vs. TrEMBL
Match: A0A061H0F8_THECC (Kinase interacting family protein, putative isoform 1 OS=Theobroma cacao GN=TCM_042295 PE=4 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 5.9e-12
Identity = 36/46 (78.26%), Postives = 42/46 (91.30%), Query Frame = -2

Query: 400 ILIMEGAEEKREAIRQLCFSIEHYRSGYHMLREVFIGQKRVPVLAS 459
           I I+EGAEEKREAIRQLCFS+EHYR+GYHMLR+ F+G KRV VLA+
Sbjct: 562 IAILEGAEEKREAIRQLCFSLEHYRNGYHMLRQAFVGHKRVRVLAT 607

Query: 460 519
           
Sbjct: 622 607

Query: 520 538
           
Sbjct: 682 607

BLAST of CU085837 vs. NCBI nr
Match: gi|449439197|ref|XP_004137373.1| (PREDICTED: protein NETWORKED 4A [Cucumis sativus])

HSP 1 Score: 111.7 bits (278), Expect = 2.0e-21
Identity = 61/94 (64.89%), Postives = 61/94 (64.89%), Query Frame = -2

Query: 400 QVDDIXXXXXXXXXXXXXXXSGIDKADKVAXXXXXXXXXXXXXXXXXXILIMEGAEEKRE 459
           QVDDI               SGIDKADKVA                  ILIMEGAEEKRE
Sbjct: 527 QVDDIRKHVEKLERERVELVSGIDKADKVAEKLRLREKELEGEVEKQRILIMEGAEEKRE 586

Query: 460 AIRQLCFSIEHYRSGYHMLREVFIGQKRVPVLAS 519
           AIRQLCFSIEHYRSGYHMLREVFIGQKRVPVLAS
Sbjct: 587 AIRQLCFSIEHYRSGYHMLREVFIGQKRVPVLAS 620

Query: 520 579
           
Sbjct: 647 620

Query: 580 639
           
Sbjct: 707 620

Query: 640 682
           
Sbjct: 767 620

BLAST of CU085837 vs. NCBI nr
Match: gi|659114906|ref|XP_008457285.1| (PREDICTED: intracellular protein transport protein USO1 [Cucumis melo])

HSP 1 Score: 109.4 bits (272), Expect = 9.9e-21
Identity = 60/94 (63.83%), Postives = 60/94 (63.83%), Query Frame = -2

Query: 400 QVDDIXXXXXXXXXXXXXXXSGIDKADKVAXXXXXXXXXXXXXXXXXXILIMEGAEEKRE 459
           QVDDI               S IDKADKVA                  ILIMEGAEEKRE
Sbjct: 527 QVDDIRKHVGKLERERVELVSSIDKADKVAEKLRLREKELEGEVEKQRILIMEGAEEKRE 586

Query: 460 AIRQLCFSIEHYRSGYHMLREVFIGQKRVPVLAS 519
           AIRQLCFSIEHYRSGYHMLREVFIGQKRVPVLAS
Sbjct: 587 AIRQLCFSIEHYRSGYHMLREVFIGQKRVPVLAS 620

Query: 520 579
           
Sbjct: 647 620

Query: 580 639
           
Sbjct: 707 620

Query: 640 682
           
Sbjct: 767 620

BLAST of CU085837 vs. NCBI nr
Match: gi|661874678|emb|CDP20488.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 82.0 bits (201), Expect = 1.7e-12
Identity = 36/45 (80.00%), Postives = 42/45 (93.33%), Query Frame = -2

Query: 400 LIMEGAEEKREAIRQLCFSIEHYRSGYHMLREVFIGQKRVPVLAS 459
           LI+EGAEEKREAIRQLCFS+EHYR+GYHMLR+  IG KR+PV+AS
Sbjct: 636 LILEGAEEKREAIRQLCFSLEHYRNGYHMLRQAVIGHKRLPVMAS 680

Query: 460 519
           
Sbjct: 696 680

Query: 520 535
           
Sbjct: 756 680

BLAST of CU085837 vs. NCBI nr
Match: gi|823220217|ref|XP_012442818.1| (PREDICTED: protein NETWORKED 4A-like isoform X1 [Gossypium raimondii])

HSP 1 Score: 81.6 bits (200), Expect = 2.2e-12
Identity = 35/46 (76.09%), Postives = 42/46 (91.30%), Query Frame = -2

Query: 400 ILIMEGAEEKREAIRQLCFSIEHYRSGYHMLREVFIGQKRVPVLAS 459
           I+I+EGAEEKREAIRQLCFS++HYR GYH LR+ F+GQKRVPVL +
Sbjct: 607 IMILEGAEEKREAIRQLCFSLDHYRDGYHWLRQAFMGQKRVPVLTT 652

Query: 460 519
           
Sbjct: 667 652

Query: 520 538
           
Sbjct: 727 652

BLAST of CU085837 vs. NCBI nr
Match: gi|763789243|gb|KJB56239.1| (hypothetical protein B456_009G111800 [Gossypium raimondii])

HSP 1 Score: 81.6 bits (200), Expect = 2.2e-12
Identity = 35/46 (76.09%), Postives = 42/46 (91.30%), Query Frame = -2

Query: 400 ILIMEGAEEKREAIRQLCFSIEHYRSGYHMLREVFIGQKRVPVLAS 459
           I+I+EGAEEKREAIRQLCFS++HYR GYH LR+ F+GQKRVPVL +
Sbjct: 530 IMILEGAEEKREAIRQLCFSLDHYRDGYHWLRQAFMGQKRVPVLTT 575

Query: 460 519
           
Sbjct: 590 575

Query: 520 538
           
Sbjct: 650 575

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A068VLD4_COFCA3.4e-1280.00Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00011429001 PE=4 SV=1[more]
A0A0D2UK24_GOSRA4.5e-1276.09Uncharacterized protein OS=Gossypium raimondii GN=B456_009G111800 PE=4 SV=1[more]
A0A0D2THT2_GOSRA4.5e-1276.09Uncharacterized protein OS=Gossypium raimondii GN=B456_009G111800 PE=4 SV=1[more]
A0A0B0MNS0_GOSAR4.5e-1276.09Transforming acidic coiled-coil-containing 2 OS=Gossypium arboreum GN=F383_24121... [more]
A0A061H0F8_THECC5.9e-1278.26Kinase interacting family protein, putative isoform 1 OS=Theobroma cacao GN=TCM_... [more]
Match NameE-valueIdentityDescription
gi|449439197|ref|XP_004137373.1|2.0e-2164.89PREDICTED: protein NETWORKED 4A [Cucumis sativus][more]
gi|659114906|ref|XP_008457285.1|9.9e-2163.83PREDICTED: intracellular protein transport protein USO1 [Cucumis melo][more]
gi|661874678|emb|CDP20488.1|1.7e-1280.00unnamed protein product [Coffea canephora][more]
gi|823220217|ref|XP_012442818.1|2.2e-1276.09PREDICTED: protein NETWORKED 4A-like isoform X1 [Gossypium raimondii][more]
gi|763789243|gb|KJB56239.1|2.2e-1276.09hypothetical protein B456_009G111800 [Gossypium raimondii][more]
The following terms have been associated with this transcribed_cluster:
Vocabulary: INTERPRO
TermDefinition

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa1G028070Csa1G028070gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
Cuc4_4_G10Cuc4_4_G10EST
H0177339H0177339EST


Analysis Name: InterPro Annotations of cucumber unigene v3
Date Performed: 2016-11-16
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 62..89
score: -coord: 13..54
scor
NoneNo IPR availablePANTHERPTHR32258FAMILY NOT NAMEDcoord: 9..133
score: 1.0
NoneNo IPR availablePANTHERPTHR32258:SF4KINASE INTERACTING (KIP1-LIKE) FAMILY PROTEINcoord: 9..133
score: 1.0