CU085837 (transcribed_cluster) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
TTTTAAGAATAAAGAGCTACATGTAGGCATTGGACAAAGGTTATTTACCAACAAGTTAACGTTTGTCAAAATGATTCAATCCTGGCGTCTCATACACAACAAAATACAAGCCTTAGAATTGGAGCTCATTTGCGTGGTTCGCATTGGTCTTCTAGATTTCAAGTTTGATCCAAGGTACGAAAGGTCCTAAAAGTGTTTCATACTTCAACAGACGTTAAAAGAGCCAAAACTTGGCAACAGGACGCTGCTGGGACGATTCACATCAAACTCCCGCCCATTGTTTCTCTAAACGAACTACATTTACATAATTTAATTTAACAAACAGAAAACCGTTAGTTTCATCCCAGAAACAAGCCAACAACTGTTTTGAGATTCGATGTTATTCTAAACATGTACTTAAGAAGCCAACACTGGAACCCGCTTTTGACCAATAAAAACTTCTCTAAGCATATGATATCCACTCCTGTAGTGCTCAATCGAAAAACATAGCTGCCTTATAGCCTCTCTCTTTTCCTCGGCTCCTTCCATTATCAGTATTCTTTGCTTCTCCACCTCCCCCTCCAGCTCCTTCTCTCTTAATCTTAACTTCTCCGCCACCTTGTCTGCTTTATCAATACCTGACACTAGTTCCACACGTTCCCTTTCCAATTTTTCCACATGCTTCCTTATATCATCTACCTGCTTATCTTTTAGACCTCAGTTTCTCTTTCAAAGCAACAATTTCATCCTGTAGCTGATCCCTTTCAGATTCCAAATCATTCAGACCCAATTTTTAAAAATACTCCATGCATTCTACTTT
BLAST of CU085837 vs. TrEMBL
Match: A0A068VLD4_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00011429001 PE=4 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 3.4e-12 Identity = 36/45 (80.00%), Postives = 42/45 (93.33%), Query Frame = -2
BLAST of CU085837 vs. TrEMBL
Match: A0A0D2UK24_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G111800 PE=4 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 4.5e-12 Identity = 35/46 (76.09%), Postives = 42/46 (91.30%), Query Frame = -2
BLAST of CU085837 vs. TrEMBL
Match: A0A0D2THT2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G111800 PE=4 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 4.5e-12 Identity = 35/46 (76.09%), Postives = 42/46 (91.30%), Query Frame = -2
BLAST of CU085837 vs. TrEMBL
Match: A0A0B0MNS0_GOSAR (Transforming acidic coiled-coil-containing 2 OS=Gossypium arboreum GN=F383_24121 PE=4 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 4.5e-12 Identity = 35/46 (76.09%), Postives = 42/46 (91.30%), Query Frame = -2
BLAST of CU085837 vs. TrEMBL
Match: A0A061H0F8_THECC (Kinase interacting family protein, putative isoform 1 OS=Theobroma cacao GN=TCM_042295 PE=4 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 5.9e-12 Identity = 36/46 (78.26%), Postives = 42/46 (91.30%), Query Frame = -2
BLAST of CU085837 vs. NCBI nr
Match: gi|449439197|ref|XP_004137373.1| (PREDICTED: protein NETWORKED 4A [Cucumis sativus]) HSP 1 Score: 111.7 bits (278), Expect = 2.0e-21 Identity = 61/94 (64.89%), Postives = 61/94 (64.89%), Query Frame = -2
BLAST of CU085837 vs. NCBI nr
Match: gi|659114906|ref|XP_008457285.1| (PREDICTED: intracellular protein transport protein USO1 [Cucumis melo]) HSP 1 Score: 109.4 bits (272), Expect = 9.9e-21 Identity = 60/94 (63.83%), Postives = 60/94 (63.83%), Query Frame = -2
BLAST of CU085837 vs. NCBI nr
Match: gi|661874678|emb|CDP20488.1| (unnamed protein product [Coffea canephora]) HSP 1 Score: 82.0 bits (201), Expect = 1.7e-12 Identity = 36/45 (80.00%), Postives = 42/45 (93.33%), Query Frame = -2
BLAST of CU085837 vs. NCBI nr
Match: gi|823220217|ref|XP_012442818.1| (PREDICTED: protein NETWORKED 4A-like isoform X1 [Gossypium raimondii]) HSP 1 Score: 81.6 bits (200), Expect = 2.2e-12 Identity = 35/46 (76.09%), Postives = 42/46 (91.30%), Query Frame = -2
BLAST of CU085837 vs. NCBI nr
Match: gi|763789243|gb|KJB56239.1| (hypothetical protein B456_009G111800 [Gossypium raimondii]) HSP 1 Score: 81.6 bits (200), Expect = 2.2e-12 Identity = 35/46 (76.09%), Postives = 42/46 (91.30%), Query Frame = -2
The following BLAST results are available for this feature:
The following terms have been associated with this transcribed_cluster:
This transcribed_cluster is associated with the following gene feature(s):
The following EST feature(s) are a part of this transcribed_cluster:
Analysis Name: InterPro Annotations of cucumber unigene v3
Date Performed: 2016-11-16
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