CU084587 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU084587
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr1 : 2992298 .. 2992835 (-)
Sequence length233
The following sequences are available for this feature:

transcribed_cluster sequence

CGGCCGGGGACAAACGCTCTTCTTCGTTCCATTTCACCATTGTCATAACTGTTAGCGTTCCTCCGTCTCCATTAAAGCCCACGCAGACTGCTCCAATCAATCTTCTTTGCATAATATTATGTTACAGATACTCTCCTAGCGCACCGCAAAAACCTACCCATCTCTCTTCGCGAATCCAGATCGTGGCAAGACTCGACACTGAGCAGCCTGAAAATGAGTGACAGCCAGAAGTT
BLAST of CU084587 vs. TrEMBL
Match: A0A0A0LSE9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G025990 PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 1.1e-22
Identity = 54/54 (100.00%), Postives = 54/54 (100.00%), Query Frame = 3

Query: 12  KRSSSFHFTIVITVSVPPSPLKPTQTAPINLLCIILCYRYSPSAPQKPTHLSSR 71
           KRSSSFHFTIVITVSVPPSPLKPTQTAPINLLCIILCYRYSPSAPQKPTHLSSR
Sbjct: 4   KRSSSFHFTIVITVSVPPSPLKPTQTAPINLLCIILCYRYSPSAPQKPTHLSSR 57

Query: 72  131
           
Sbjct: 64  57

Query: 132 174
           
Sbjct: 124 57

BLAST of CU084587 vs. TrEMBL
Match: A0A0A0LSE9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G025990 PE=4 SV=1)

HSP 1 Score: 40.8 bits (94), Expect = 8.7e-01
Identity = 19/19 (100.00%), Postives = 19/19 (100.00%), Query Frame = 1

Query: 175 SRSWQDSTLSSLKMSDSQK 232
           SRSWQDSTLSSLKMSDSQK
Sbjct: 56  SRSWQDSTLSSLKMSDSQK 74

BLAST of CU084587 vs. NCBI nr
Match: gi|700208823|gb|KGN63919.1| (hypothetical protein Csa_1G025990 [Cucumis sativus])

HSP 1 Score: 113.2 bits (282), Expect = 2.0e-22
Identity = 54/54 (100.00%), Postives = 54/54 (100.00%), Query Frame = 3

Query: 12  KRSSSFHFTIVITVSVPPSPLKPTQTAPINLLCIILCYRYSPSAPQKPTHLSSR 71
           KRSSSFHFTIVITVSVPPSPLKPTQTAPINLLCIILCYRYSPSAPQKPTHLSSR
Sbjct: 4   KRSSSFHFTIVITVSVPPSPLKPTQTAPINLLCIILCYRYSPSAPQKPTHLSSR 57

Query: 72  131
           
Sbjct: 64  57

Query: 132 174
           
Sbjct: 124 57

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LSE9_CUCSA1.1e-22100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G025990 PE=4 SV=1[more]
A0A0A0LSE9_CUCSA8.7e-01100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G025990 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700208823|gb|KGN63919.1|2.0e-22100.00hypothetical protein Csa_1G025990 [Cucumis sativus][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa1G025990Csa1G025990gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
FKNP3UI02NKS7RFKNP3UI02NKS7REST
G0084019G0084019EST
G0213168G0213168EST