MELO3C035395.2.1 (mRNA) Melon (DHL92) v3.6.1

NameMELO3C035395.2.1
TypemRNA
OrganismCucumis melo (Melon (DHL92) v3.6.1)
Descriptionpectinesterase 2-like
Locationchr12 : 9935434 .. 9936117 (-)
Sequence length684
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGAATCTTCGACGTTTGAAAACTCAGTCGGACCTCAAAGCGGTTAGACAGTAGCGGTCTTTGACAAAGCCGACCACATTGCCAATAAGCGTAGGTTTCTGGGTTTTCAAGACACGTACGTTATATGTCAACGGAAAGTATCAATTTTTTAAGGAGTCCGACATATATGGAAGCATTGATTTCATCTTTGGACATGAGCGAGTAATGTTTCAAGATTGCCATATATATGCTCGGATGCCGAACAATTCTATCACAGTCACAGCACAATCCAAAGATGATTTACAGTCTATCAGCGGTTTTTCATTTCAAAACTGTACTGTCACAGTTTCAACTGAAATGTCTTCAAATAAACAGAACGCTAAAATCTTTTTGGGTCGTCCATGGAAACAGTATTCAAACGTTGTGTTTATGGAATCATTTCTTGATGATGTGGTGGTGTCAGAGACTCAGAAGGGTGGATGGAATGGAATGGAAAGGTGCACCAATTAACAACTTGTCTCATGGAGTGTTCAACAACTATGATCTTGGGGCTAACGTTTTCAAAAGAGTTAATTAGACTGACTATCATTTATTAGATAAGGAATCAACCATTCGTTTTACGATAAATAACTTTAATTTGTTAATGAATCTAAATGGTTACCTAAAATGGAGACTCTGTTTAGGCGTGGATTTTTTACATA

mRNA sequence

ATGGCAGAATCTTCGACGTTTGAAAACTCAGTCGGACCTCAAAGCGGTTAGACAGTAGCGGTCTTTGACAAAGCCGACCACATTGCCAATAAGCGTAGGTTTCTGGGTTTTCAAGACACGTACGTTATATGTCAACGGAAAGTATCAATTTTTTAAGGAGTCCGACATATATGGAAGCATTGATTTCATCTTTGGACATGAGCGAGTAATGTTTCAAGATTGCCATATATATGCTCGGATGCCGAACAATTCTATCACAGTCACAGCACAATCCAAAGATGATTTACAGTCTATCAGCGGTTTTTCATTTCAAAACTGTACTGTCACAGTTTCAACTGAAATGTCTTCAAATAAACAGAACGCTAAAATCTTTTTGGGTCGTCCATGGAAACAGTATTCAAACGTTGTGTTTATGGAATCATTTCTTGATGATGTGGTGGTGTCAGAGACTCAGAAGGGTGGATGGAATGGAATGGAAAGGTGCACCAATTAACAACTTGTCTCATGGAGTGTTCAACAACTATGATCTTGGGGCTAACGTTTTCAAAAGAGTTAATTAGACTGACTATCATTTATTAGATAAGGAATCAACCATTCGTTTTACGATAAATAACTTTAATTTGTTAATGAATCTAAATGGTTACCTAAAATGGAGACTCTGTTTAGGCGTGGATTTTTTACATA

Coding sequence (CDS)

ATGCTCGGATGCCGAACAATTCTATCACAGTCACAGCACAATCCAAAGATGATTTACAGTCTATCAGCGGTTTTTCATTTCAAAACTGTACTGTCACAGTTTCAACTGAAATGTCTTCAAATAAACAGAACGCTAAAATCTTTTTGGGTCGTCCATGGAAACAGTATTCAAACGTTGTGTTTATGGAATCATTTCTTGATGATGTGGTGGTGTCAGAGACTCAGAAGGGTGGATGGAATGGAATGGAAAGGTGCACCAATTAACAACTTGTCTCATGGAGTGTTCAACAACTATGATCTTGGGGCTAACGTTTTCAAAAGAGTTAATTAG

Protein sequence

MLGCRTILSQSQHNPKMIYSLSAVFHFKTVLSQFQLKCLQINRTLKSFWVVHGNSIQTLCLWNHFLMMWWCQRLRRVDGMEWKGAPINNLSHGVFNNYDLGANVFKRVN
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042545 cell wall modification
biological_process GO:0045490 pectin catabolic process
cellular_component GO:0005618 cell wall
molecular_function GO:0045330 aspartyl esterase activity
molecular_function GO:0030599 pectinesterase activity

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
MELO3C035395.2MELO3C035395.2gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C035395.2.1.five_prime_UTR.1MELO3C035395.2.1.five_prime_UTR.1five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C035395.2.1.CDS.1MELO3C035395.2.1.CDS.1CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C035395.2.1.three_prime_UTR.1MELO3C035395.2.1.three_prime_UTR.1three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C035395.2.1.exon.1MELO3C035395.2.1.exon.1exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
MELO3C035395.2.1MELO3C035395.2.1-proteinpolypeptide