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The following sequences are available for this feature:
Gene sequence (with intron) Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. ATGGTAGGAAAGGCAAAGGCCTTTAATAACACTAGAGTAAAGCATAGAGTGAAGCGGTCGATTAAGGTGCCCACGATTAGTAACAAGCTAGCAGATATGATGATTATTCATGGAAGAAATATGGTCAAAAGCCAATAAAGGGTTCTCCACACCCAAGGTATACAAATATGA mRNA sequence ATGGTAGGAAAGGCAAAGGCCTTTAATAACACTAGAGTAAAGCATAGAGTGAAGCGGTCGATTAAGGTGCCCACGATTAGTAACAAGCTAGCAGATATGATGATTATTCATGGAAGAAATATGGTCAAAAGCCAATAAAGGGTTCTCCACACCCAAGGTATACAAATATGA Coding sequence (CDS) ATGGTAGGAAAGGCAAAGGCCTTTAATAACACTAGAGTAAAGCATAGAGTGAAGCGGTCGATTAAGGTGCCCACGATTAGTAACAAGCTAGCAGATATGATGATTATTCATGGAAGAAATATGGTCAAAAGCCAATAA Protein sequence MVGKAKAFNNTRVKHRVKRSIKVPTISNKLADMMIIHGRNMVKSQ
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
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The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR018872 | Zn-cluster-dom |
GO Assignments
This mRNA is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006355 |
regulation of transcription, DNA-templated |
| cellular_component |
GO:0005575 |
cellular_component |
| molecular_function |
GO:0043565 |
sequence-specific DNA binding |
| molecular_function |
GO:0003700 |
transcription factor activity, sequence-specific DNA binding |
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| MELO3C035357.2.1.CDS.1 | MELO3C035357.2.1.CDS.1 | CDS |
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| MELO3C035357.2.1.exon.1 | MELO3C035357.2.1.exon.1 | exon |
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| MELO3C035357.2.1.three_prime_UTR.1 | MELO3C035357.2.1.three_prime_UTR.1 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Type |
|---|
| MELO3C035357.2.1 | MELO3C035357.2.1-protein | polypeptide |
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR018872 | Zn-cluster domain | PFAM | PF10533 | Plant_zn_clust | coord: 12..32
e-value: 1.2E-7
score: 31.5 |
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