MELO3C035251.2.1 (mRNA) Melon (DHL92) v3.6.1
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTTTTCCTCGCCTTCAATCACTTGGTTAAGCTCCAGACAAGAAGGCAATGGCTCGAAGCAGCCGAATACTGGTCTCTTTGTGGGACTTAACAAAGGACACATAGTTAGAAAGAAAGAGTTGGCTCCCCTCCCCACACATCCTAGAGGAAAAAGTAGCAAAATAGTTCTCTTTGTGGGGAGTTTGATTTGTGAAGTTGTTGGCTTTGCCCACACAAGAAGAGAATAACTGAGCTTCTTAAAGTTGGAAAGGACAAAAGAGCACTTAAAGTGGCCAAGAGAAAGTTGGGAATTCACAAGAGAGCCAAGAAGAAGAGAGAAGAAATGTCCAGCGTACTCCGCAACGTGAGAGCTGGTGCAGGCGCGAAAAAGAAGAAATGAAACTAGCATGGTTATTGTGGAGCTTCTAATTCCCATAATGTTAGGGACGTGTTCTAGATTTTGTTATTTTTTTGTTATCCAGAATGATATTCAATGGATTTTTTAACATTACATTAGATGAATTGTGATGCTATTAGAACTTAAATTTAAATTTCAACAAGTATTTTTTCTTTAATAGAACCTTGTGGGTCGTTTGTATCT GTTTTCCTCGCCTTCAATCACTTGGTTAAGCTCCAGACAAGAAGGCAATGGCTCGAAGCAGCCGAATACTGGTCTCTTTGTGGGACTTAACAAAGGACACATAGTTAGAAAGAAAGAGTTGGCTCCCCTCCCCACACATCCTAGAGGAAAAAGTAGCAAAATAGTTCTCTTTGTGGGGAGTTTGATTTGTGAAGTTGTTGGCTTTGCCCACACAAGAAGAGAATAACTGAGCTTCTTAAAGTTGGAAAGGACAAAAGAGCACTTAAAGTGGCCAAGAGAAAGTTGGGAATTCACAAGAGAGCCAAGAAGAAGAGAGAAGAAATGTCCAGCGTACTCCGCAACGTGAGAGCTGGTGCAGGCGCGAAAAAGAAGAAATGAAACTAGCATGGTTATTGTGGAGCTTCTAATTCCCATAATGTTAGGGACGTGTTCTAGATTTTGTTATTTTTTTGTTATCCAGAATGATATTCAATGGATTTTTTAACATTACATTAGATGAATTGTGATGCTATTAGAACTTAAATTTAAATTTCAACAAGTATTTTTTCTTTAATAGAACCTTGTGGGTCGTTTGTATCT TTTTCCTCGCCTTCAATCACTTGGTTAAGCTCCAGACAAGAAGGCAATGGCTCGAAGCAGCCGAATACTGGTCTCTTTGTGGGACTTAACAAAGGACACATAGTTAGAAAGAAAGAGTTGGCTCCCCTCCCCACACATCCTAGAGGAAAAAGTAGCAAAATAGTTCTCTTTGTGGGGAGTTTGATTTGTGAAGTTGTTGGCTTTGCCCACACAAGAAGAGAATAA FSSPSITWLSSRQEGNGSKQPNTGLFVGLNKGHIVRKKELAPLPTHPRGKSSKIVLFVGSLICEVVGFAHTRRE
BLAST of MELO3C035251.2.1 vs. NCBI nr
Match: XP_004140771.1 (PREDICTED: 60S ribosomal protein L36-2-like [Cucumis sativus] >XP_004152381.1 PREDICTED: 60S ribosomal protein L36-2-like [Cucumis sativus] >XP_008436991.1 PREDICTED: 60S ribosomal protein L36-2-like [Cucumis melo] >XP_008439254.1 PREDICTED: 60S ribosomal protein L36-2-like [Cucumis melo] >ADN34294.1 60S ribosomal protein l36e [Cucumis melo subsp. melo] >KGN50297.1 hypothetical protein Csa_5G166410 [Cucumis sativus] >KGN57388.1 hypothetical protein Csa_3G182240 [Cucumis sativus]) HSP 1 Score: 81.6 bits (200), Expect = 1.2e-12 Identity = 41/51 (80.39%), Postives = 43/51 (84.31%), Query Frame = 0
BLAST of MELO3C035251.2.1 vs. NCBI nr
Match: XP_022945858.1 (60S ribosomal protein L36-2-like [Cucurbita moschata] >XP_022958049.1 60S ribosomal protein L36-2-like [Cucurbita moschata] >XP_022958050.1 60S ribosomal protein L36-2-like [Cucurbita moschata] >XP_022995694.1 60S ribosomal protein L36-2-like [Cucurbita maxima] >XP_023532485.1 60S ribosomal protein L36-2-like [Cucurbita pepo subsp. pepo] >XP_023532486.1 60S ribosomal protein L36-2-like [Cucurbita pepo subsp. pepo] >XP_023541175.1 60S ribosomal protein L36-2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 81.6 bits (200), Expect = 1.2e-12 Identity = 41/51 (80.39%), Postives = 43/51 (84.31%), Query Frame = 0
BLAST of MELO3C035251.2.1 vs. NCBI nr
Match: XP_002305746.1 (60S ribosomal protein L36-2 [Populus trichocarpa] >ABK94139.1 unknown [Populus trichocarpa] >ABK95527.1 unknown [Populus trichocarpa] >PNT39743.1 hypothetical protein POPTR_004G057000v3 [Populus trichocarpa] >PNT39744.1 hypothetical protein POPTR_004G057000v3 [Populus trichocarpa]) HSP 1 Score: 80.5 bits (197), Expect = 2.7e-12 Identity = 40/51 (78.43%), Postives = 43/51 (84.31%), Query Frame = 0
BLAST of MELO3C035251.2.1 vs. NCBI nr
Match: XP_011008473.1 (PREDICTED: 60S ribosomal protein L36-1-like isoform X1 [Populus euphratica]) HSP 1 Score: 80.5 bits (197), Expect = 2.7e-12 Identity = 40/51 (78.43%), Postives = 43/51 (84.31%), Query Frame = 0
BLAST of MELO3C035251.2.1 vs. NCBI nr
Match: XP_011008474.1 (PREDICTED: 60S ribosomal protein L36-2-like isoform X2 [Populus euphratica]) HSP 1 Score: 80.5 bits (197), Expect = 2.7e-12 Identity = 40/51 (78.43%), Postives = 43/51 (84.31%), Query Frame = 0
BLAST of MELO3C035251.2.1 vs. TAIR10
Match: AT2G37600.1 (Ribosomal protein L36e family protein) HSP 1 Score: 62.4 bits (150), Expect = 1.4e-10 Identity = 28/47 (59.57%), Postives = 35/47 (74.47%), Query Frame = 0
BLAST of MELO3C035251.2.1 vs. TAIR10
Match: AT3G53740.2 (Ribosomal protein L36e family protein) HSP 1 Score: 62.4 bits (150), Expect = 1.4e-10 Identity = 29/50 (58.00%), Postives = 37/50 (74.00%), Query Frame = 0
BLAST of MELO3C035251.2.1 vs. TAIR10
Match: AT5G02450.1 (Ribosomal protein L36e family protein) HSP 1 Score: 59.3 bits (142), Expect = 1.2e-09 Identity = 27/47 (57.45%), Postives = 35/47 (74.47%), Query Frame = 0
BLAST of MELO3C035251.2.1 vs. Swiss-Prot
Match: sp|P52866|RL36_DAUCA (60S ribosomal protein L36 OS=Daucus carota OX=4039 GN=RPL36 PE=3 SV=2) HSP 1 Score: 73.6 bits (179), Expect = 1.1e-12 Identity = 36/50 (72.00%), Postives = 40/50 (80.00%), Query Frame = 0
BLAST of MELO3C035251.2.1 vs. Swiss-Prot
Match: sp|O80929|RL361_ARATH (60S ribosomal protein L36-1 OS=Arabidopsis thaliana OX=3702 GN=RPL36A PE=3 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 2.5e-09 Identity = 28/47 (59.57%), Postives = 35/47 (74.47%), Query Frame = 0
BLAST of MELO3C035251.2.1 vs. Swiss-Prot
Match: sp|Q9M352|RL362_ARATH (60S ribosomal protein L36-2 OS=Arabidopsis thaliana OX=3702 GN=RPL36B PE=3 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 2.5e-09 Identity = 29/50 (58.00%), Postives = 37/50 (74.00%), Query Frame = 0
BLAST of MELO3C035251.2.1 vs. Swiss-Prot
Match: sp|Q9LZ57|RL363_ARATH (60S ribosomal protein L36-3 OS=Arabidopsis thaliana OX=3702 GN=RPL36C PE=3 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 2.1e-08 Identity = 27/47 (57.45%), Postives = 35/47 (74.47%), Query Frame = 0
BLAST of MELO3C035251.2.1 vs. Swiss-Prot
Match: sp|Q92365|RL36A_SCHPO (60S ribosomal protein L36-A OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rpl3601 PE=3 SV=2) HSP 1 Score: 48.5 bits (114), Expect = 3.7e-05 Identity = 23/50 (46.00%), Postives = 32/50 (64.00%), Query Frame = 0
BLAST of MELO3C035251.2.1 vs. TrEMBL
Match: tr|A0A0A0L6L0|A0A0A0L6L0_CUCSA (60S ribosomal protein L36 OS=Cucumis sativus OX=3659 GN=Csa_3G182240 PE=3 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 7.9e-13 Identity = 41/51 (80.39%), Postives = 43/51 (84.31%), Query Frame = 0
BLAST of MELO3C035251.2.1 vs. TrEMBL
Match: tr|A0A1S3AYD7|A0A1S3AYD7_CUCME (60S ribosomal protein L36 OS=Cucumis melo OX=3656 GN=LOC103484093 PE=3 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 7.9e-13 Identity = 41/51 (80.39%), Postives = 43/51 (84.31%), Query Frame = 0
BLAST of MELO3C035251.2.1 vs. TrEMBL
Match: tr|E5GCU5|E5GCU5_CUCME (60S ribosomal protein L36 OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 7.9e-13 Identity = 41/51 (80.39%), Postives = 43/51 (84.31%), Query Frame = 0
BLAST of MELO3C035251.2.1 vs. TrEMBL
Match: tr|A9PCN6|A9PCN6_POPTR (60S ribosomal protein L36 OS=Populus trichocarpa OX=3694 GN=POPTR_004G057000v3 PE=2 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 1.8e-12 Identity = 40/51 (78.43%), Postives = 43/51 (84.31%), Query Frame = 0
BLAST of MELO3C035251.2.1 vs. TrEMBL
Match: tr|A9P9I5|A9P9I5_POPTR (60S ribosomal protein L36 OS=Populus trichocarpa OX=3694 GN=POPTR_015G145800v3 PE=2 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 2.3e-12 Identity = 39/51 (76.47%), Postives = 43/51 (84.31%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
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