MELO3C035025.2.1 (mRNA) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C035025.2.1
Type	mRNA
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	Calcineurin-like metallo-phosphoesterase superfamily protein
Location	chr11 : 16870717 .. 16871118 (+)
Sequence length	402

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAAGCCTGAATTACCTTATTGGGTGTCCGAACTAAAGCCATATGATGGACCTCGATGTTATGTAATTCTTGGAAATCATGGTTGTTGCCTTACTCAATCTGAGCTATTCCAATTTATAGAATACTTGGAAGTAATTACCCATCATCTAAATGAGCTAATGCATTCTTTTGGTTTTATAGATTGGTTCGATAGACTTCATACCTATATGAGATACATATGTCATAAGAGCTGGTTGGGTGATTGGTTTATGCATGGGTATGCCATCTTCATTGTATTCTACAAATTTCCTCTCACCTTCACTTCGAACATGTATCACATCAAACATAATCGTAGGTCCCCGCTTTCTTTGTTGTTTAGGCTTTTCTACATGTTGTTCATCAACTCCTCCAACAACTAA

mRNA sequence

ATGAAGAAGCCTGAATTACCTTATTGGGTGTCCGAACTAAAGCCATATGATGGACCTCGATGTTATGTAATTCTTGGAAATCATGGTTGTTGCCTTACTCAATCTGAGCTATTCCAATTTATAGAATACTTGGAAGTAATTACCCATCATCTAAATGAGCTAATGCATTCTTTTGGTTTTATAGATTGGTTCGATAGACTTCATACCTATATGAGATACATATGTCATAAGAGCTGGTTGGGTGATTGGTTTATGCATGGGTATGCCATCTTCATTGTATTCTACAAATTTCCTCTCACCTTCACTTCGAACATGTATCACATCAAACATAATCGTAGGTCCCCGCTTTCTTTGTTGTTTAGGCTTTTCTACATGTTGTTCATCAACTCCTCCAACAACTAA

Coding sequence (CDS)

ATGAAGAAGCCTGAATTACCTTATTGGGTGTCCGAACTAAAGCCATATGATGGACCTCGATGTTATGTAATTCTTGGAAATCATGGTTGTTGCCTTACTCAATCTGAGCTATTCCAATTTATAGAATACTTGGAAGTAATTACCCATCATCTAAATGAGCTAATGCATTCTTTTGGTTTTATAGATTGGTTCGATAGACTTCATACCTATATGAGATACATATGTCATAAGAGCTGGTTGGGTGATTGGTTTATGCATGGGTATGCCATCTTCATTGTATTCTACAAATTTCCTCTCACCTTCACTTCGAACATGTATCACATCAAACATAATCGTAGGTCCCCGCTTTCTTTGTTGTTTAGGCTTTTCTACATGTTGTTCATCAACTCCTCCAACAACTAA

Protein sequence

MKKPELPYWVSELKPYDGPRCYVILGNHGCCLTQSELFQFIEYLEVITHHLNELMHSFGFIDWFDRLHTYMRYICHKSWLGDWFMHGYAIFIVFYKFPLTFTSNMYHIKHNRRSPLSLLFRLFYMLFINSSNN

Homology

[Close]

BLAST of MELO3C035025.2.1 vs. NCBI nr
Match: XP_008444644.1 (PREDICTED: uncharacterized protein LOC103487913 [Cucumis melo])

HSP 1 Score: 92.8 bits (229), Expect = 9.3e-16
Identity = 44/85 (51.76%), Postives = 48/85 (56.47%), Query Frame = 0


Query: 1   MKKPELPYWVSELKPYDGPRCYVILGNHGCCLTQSELFQFIEYLEVITHHLNELMHSFGF 60
           +KKPELP+W+SELK YDGP+CYVI GNH                                
Sbjct: 469 VKKPELPHWMSELKQYDGPQCYVIPGNH-------------------------------- 520

Query: 61  IDWFDRLHTYMRYICHKSWLGDWFM 86
            DWFD LHTYMRYICHKSWLG WFM
Sbjct: 529 -DWFDGLHTYMRYICHKSWLGGWFM 520

[Close]

BLAST of MELO3C035025.2.1 vs. NCBI nr
Match: XP_004152730.2 (PREDICTED: uncharacterized protein LOC101204257 [Cucumis sativus] >KGN62541.1 hypothetical protein Csa_2G360580 [Cucumis sativus])

HSP 1 Score: 92.8 bits (229), Expect = 9.3e-16
Identity = 44/85 (51.76%), Postives = 48/85 (56.47%), Query Frame = 0


Query: 1   MKKPELPYWVSELKPYDGPRCYVILGNHGCCLTQSELFQFIEYLEVITHHLNELMHSFGF 60
           +KKPELP+W+SELK YDGP+CYVI GNH                                
Sbjct: 469 VKKPELPHWMSELKQYDGPQCYVIPGNH-------------------------------- 520

Query: 61  IDWFDRLHTYMRYICHKSWLGDWFM 86
            DWFD LHTYMRYICHKSWLG WFM
Sbjct: 529 -DWFDGLHTYMRYICHKSWLGGWFM 520

[Close]

BLAST of MELO3C035025.2.1 vs. NCBI nr
Match: XP_022951464.1 (uncharacterized protein LOC111454274 [Cucurbita moschata])

HSP 1 Score: 88.6 bits (218), Expect = 1.8e-14
Identity = 43/85 (50.59%), Postives = 47/85 (55.29%), Query Frame = 0


Query: 1   MKKPELPYWVSELKPYDGPRCYVILGNHGCCLTQSELFQFIEYLEVITHHLNELMHSFGF 60
           +KKPELP+ +SELK YDGP+CYVI GNH                                
Sbjct: 469 VKKPELPHGISELKQYDGPQCYVIPGNH-------------------------------- 520

Query: 61  IDWFDRLHTYMRYICHKSWLGDWFM 86
            DWFD LHTYMRYICHKSWLG WFM
Sbjct: 529 -DWFDGLHTYMRYICHKSWLGGWFM 520

[Close]

BLAST of MELO3C035025.2.1 vs. NCBI nr
Match: XP_023002148.1 (uncharacterized protein LOC111496095 [Cucurbita maxima])

HSP 1 Score: 88.6 bits (218), Expect = 1.8e-14
Identity = 43/85 (50.59%), Postives = 47/85 (55.29%), Query Frame = 0


Query: 1   MKKPELPYWVSELKPYDGPRCYVILGNHGCCLTQSELFQFIEYLEVITHHLNELMHSFGF 60
           +KKPELP+ +SELK YDGP+CYVI GNH                                
Sbjct: 469 VKKPELPHGISELKQYDGPQCYVIPGNH-------------------------------- 520

Query: 61  IDWFDRLHTYMRYICHKSWLGDWFM 86
            DWFD LHTYMRYICHKSWLG WFM
Sbjct: 529 -DWFDGLHTYMRYICHKSWLGGWFM 520

[Close]

BLAST of MELO3C035025.2.1 vs. NCBI nr
Match: XP_023537415.1 (uncharacterized protein LOC111798476 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 88.6 bits (218), Expect = 1.8e-14
Identity = 43/85 (50.59%), Postives = 47/85 (55.29%), Query Frame = 0


Query: 1   MKKPELPYWVSELKPYDGPRCYVILGNHGCCLTQSELFQFIEYLEVITHHLNELMHSFGF 60
           +KKPELP+ +SELK YDGP+CYVI GNH                                
Sbjct: 469 VKKPELPHGISELKQYDGPQCYVIPGNH-------------------------------- 520

Query: 61  IDWFDRLHTYMRYICHKSWLGDWFM 86
            DWFD LHTYMRYICHKSWLG WFM
Sbjct: 529 -DWFDGLHTYMRYICHKSWLGGWFM 520

[Close]

BLAST of MELO3C035025.2.1 vs. TAIR10
Match: AT4G23000.1 (Calcineurin-like metallo-phosphoesterase superfamily protein)

HSP 1 Score: 76.3 bits (186), Expect = 1.6e-14
Identity = 37/85 (43.53%), Postives = 45/85 (52.94%), Query Frame = 0


Query: 1   MKKPELPYWVSELKPYDGPRCYVILGNHGCCLTQSELFQFIEYLEVITHHLNELMHSFGF 60
           + KPELP  VS+LK YDGP+C++I GNH                                
Sbjct: 470 VNKPELPDGVSDLKHYDGPQCFLIPGNH-------------------------------- 521

Query: 61  IDWFDRLHTYMRYICHKSWLGDWFM 86
            DWFD L+T+MRY+CHKSWLG WFM
Sbjct: 530 -DWFDGLNTFMRYVCHKSWLGGWFM 521

[Close]

BLAST of MELO3C035025.2.1 vs. TAIR10
Match: AT4G11800.1 (Calcineurin-like metallo-phosphoesterase superfamily protein)

HSP 1 Score: 73.2 bits (178), Expect = 1.4e-13
Identity = 36/83 (43.37%), Postives = 43/83 (51.81%), Query Frame = 0


Query: 3   KPELPYWVSELKPYDGPRCYVILGNHGCCLTQSELFQFIEYLEVITHHLNELMHSFGFID 62
           KPELP  VS+LK Y+GP+C++I GNH                                 D
Sbjct: 470 KPELPNGVSDLKSYEGPQCFLIPGNH---------------------------------D 519

Query: 63  WFDRLHTYMRYICHKSWLGDWFM 86
           WFD L+T+MRYICHKSWLG W M
Sbjct: 530 WFDGLNTFMRYICHKSWLGGWLM 519

[Close]

BLAST of MELO3C035025.2.1 vs. TrEMBL
Match: tr|A0A1S3BAV1|A0A1S3BAV1_CUCME (uncharacterized protein LOC103487913 OS=Cucumis melo OX=3656 GN=LOC103487913 PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 6.2e-16
Identity = 44/85 (51.76%), Postives = 48/85 (56.47%), Query Frame = 0


Query: 1   MKKPELPYWVSELKPYDGPRCYVILGNHGCCLTQSELFQFIEYLEVITHHLNELMHSFGF 60
           +KKPELP+W+SELK YDGP+CYVI GNH                                
Sbjct: 469 VKKPELPHWMSELKQYDGPQCYVIPGNH-------------------------------- 520

Query: 61  IDWFDRLHTYMRYICHKSWLGDWFM 86
            DWFD LHTYMRYICHKSWLG WFM
Sbjct: 529 -DWFDGLHTYMRYICHKSWLGGWFM 520

[Close]

BLAST of MELO3C035025.2.1 vs. TrEMBL
Match: tr|A0A0A0LRD8|A0A0A0LRD8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G360580 PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 6.2e-16
Identity = 44/85 (51.76%), Postives = 48/85 (56.47%), Query Frame = 0


Query: 1   MKKPELPYWVSELKPYDGPRCYVILGNHGCCLTQSELFQFIEYLEVITHHLNELMHSFGF 60
           +KKPELP+W+SELK YDGP+CYVI GNH                                
Sbjct: 469 VKKPELPHWMSELKQYDGPQCYVIPGNH-------------------------------- 520

Query: 61  IDWFDRLHTYMRYICHKSWLGDWFM 86
            DWFD LHTYMRYICHKSWLG WFM
Sbjct: 529 -DWFDGLHTYMRYICHKSWLGGWFM 520

[Close]

BLAST of MELO3C035025.2.1 vs. TrEMBL
Match: tr|A0A2U1KYN9|A0A2U1KYN9_ARTAN (Calcineurin-like metallo-phosphoesterase superfamily protein OS=Artemisia annua OX=35608 GN=CTI12_AA517770 PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 9.8e-14
Identity = 41/85 (48.24%), Postives = 51/85 (60.00%), Query Frame = 0


Query: 1   MKKPELPYWVSELKPYDGPRCYVILGNHGCCLTQSELFQFIEYLEVITHHLNELMHSFGF 60
           + KPELP+ VSELK YDGP+C+VI GNHG             +  ++   L++       
Sbjct: 467 VNKPELPFGVSELKQYDGPQCFVIPGNHG------------TFFNLLIGRLSQ------- 526

Query: 61  IDWFDRLHTYMRYICHKSWLGDWFM 86
            +WFD L TYMRYICHKSWLG W M
Sbjct: 527 -NWFDGLQTYMRYICHKSWLGGWLM 531

[Close]

BLAST of MELO3C035025.2.1 vs. TrEMBL
Match: tr|A0A2G5EKU2|A0A2G5EKU2_AQUCA (Uncharacterized protein OS=Aquilegia coerulea OX=218851 GN=AQUCO_00700595v1 PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 3.7e-13
Identity = 40/85 (47.06%), Postives = 45/85 (52.94%), Query Frame = 0


Query: 1   MKKPELPYWVSELKPYDGPRCYVILGNHGCCLTQSELFQFIEYLEVITHHLNELMHSFGF 60
           + KPELPY  SE+K YDGP+C+VI GNH                                
Sbjct: 456 VNKPELPYGFSEMKQYDGPQCFVIPGNH-------------------------------- 507

Query: 61  IDWFDRLHTYMRYICHKSWLGDWFM 86
            DWFD LHTYMRYICHKSWLG WF+
Sbjct: 516 -DWFDGLHTYMRYICHKSWLGGWFL 507

[Close]

BLAST of MELO3C035025.2.1 vs. TrEMBL
Match: tr|A0A2G5EL00|A0A2G5EL00_AQUCA (Uncharacterized protein OS=Aquilegia coerulea OX=218851 GN=AQUCO_00700595v1 PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 3.7e-13
Identity = 40/85 (47.06%), Postives = 45/85 (52.94%), Query Frame = 0


Query: 1   MKKPELPYWVSELKPYDGPRCYVILGNHGCCLTQSELFQFIEYLEVITHHLNELMHSFGF 60
           + KPELPY  SE+K YDGP+C+VI GNH                                
Sbjct: 456 VNKPELPYGFSEMKQYDGPQCFVIPGNH-------------------------------- 507

Query: 61  IDWFDRLHTYMRYICHKSWLGDWFM 86
            DWFD LHTYMRYICHKSWLG WF+
Sbjct: 516 -DWFDGLHTYMRYICHKSWLGGWFL 507

The following BLAST results are available for this feature:

BLAST of MELO3C035025.2.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008444644.1	9.3e-16	51.76	PREDICTED: uncharacterized protein LOC103487913 [Cucumis melo]	[more]
XP_004152730.2	9.3e-16	51.76	PREDICTED: uncharacterized protein LOC101204257 [Cucumis sativus] >KGN62541.1 hy...	[more]
XP_022951464.1	1.8e-14	50.59	uncharacterized protein LOC111454274 [Cucurbita moschata]	[more]
XP_023002148.1	1.8e-14	50.59	uncharacterized protein LOC111496095 [Cucurbita maxima]	[more]
XP_023537415.1	1.8e-14	50.59	uncharacterized protein LOC111798476 [Cucurbita pepo subsp. pepo]	[more]

BLAST of MELO3C035025.2.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G23000.1	1.6e-14	43.53	Calcineurin-like metallo-phosphoesterase superfamily protein	[more]
AT4G11800.1	1.4e-13	43.37	Calcineurin-like metallo-phosphoesterase superfamily protein	[more]

BLAST of MELO3C035025.2.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of MELO3C035025.2.1 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BAV1\|A0A1S3BAV1_CUCME	6.2e-16	51.76	uncharacterized protein LOC103487913 OS=Cucumis melo OX=3656 GN=LOC103487913 PE=...	[more]
tr\|A0A0A0LRD8\|A0A0A0LRD8_CUCSA	6.2e-16	51.76	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G360580 PE=4 SV=1	[more]
tr\|A0A2U1KYN9\|A0A2U1KYN9_ARTAN	9.8e-14	48.24	Calcineurin-like metallo-phosphoesterase superfamily protein OS=Artemisia annua ...	[more]
tr\|A0A2G5EKU2\|A0A2G5EKU2_AQUCA	3.7e-13	47.06	Uncharacterized protein OS=Aquilegia coerulea OX=218851 GN=AQUCO_00700595v1 PE=4...	[more]
tr\|A0A2G5EL00\|A0A2G5EL00_AQUCA	3.7e-13	47.06	Uncharacterized protein OS=Aquilegia coerulea OX=218851 GN=AQUCO_00700595v1 PE=4...	[more]

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0016787	hydrolase activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C035025.2	MELO3C035025.2	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C035025.2.1.CDS.1	MELO3C035025.2.1.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C035025.2.1.exon.1	MELO3C035025.2.1.exon.1	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C035025.2.1	MELO3C035025.2.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34211	FAMILY NOT NAMED	coord: 2..86